Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq292326 149 4e-31 seq215851 123 2e-23 seq245427 113 3e-20 seq166947 102 5e-17 seq150930 87.8 1e-12 >seq292326 Length=7945 Score = 149 bits (164), Expect = 4e-31 Identities = 229/327 (70%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 21060 CGCGGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTAT 21119 |||||||||||||||||||| || | ||| || || ||||| ||||| || | || Sbjct 5244 CGCGGTGTAAACAAAGTCATACTTGTCGGTCATCTCGGCCAAGATCCGGAAGTCCGTTAC 5303 Query 21120 ATACCAAATGGCGGCGCGGTCGGAAGACTCAGCATCGCAACGAATGAATCATGGCGCGAC 21179 || |||||||| || || || | | | | | | || || || |||||||| Sbjct 5304 ATGCCAAATGGTGGTGCTGTTGCTAACATTACCCTGGCGACCTCAGAGAGCTGGCGCGAT 5363 Query 21180 AAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAAAA 21239 ||| || || | |||||||| |||| |||||||| ||||| |||| || || Sbjct 5364 AAGGCGACTGGTGAGCAGAAAGAAAAAACCGAATGGCACCGTGTCGTGCTGTTTGGCAAG 5423 Query 21240 CTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGAAA 21299 ||||| |||||||| |||| ||||| || || || || ||| | ||||| ||||| Sbjct 5424 CTTGCCGAAATTGCCGGTGAATATTTGCGTAAGGGCTCGCAGATTTACATTGAAGGCTCC 5483 Query 21300 CTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTATC 21359 || | || || || ||||| ||| | |||||||| ||| ||||| || ||||| || Sbjct 5484 CTGCAGACACGCAAATGGACCGATCAGGCCGGTGTGGAAAAATACACCACTGAAATAGTC 5543 Query 21360 GTCAGCCAGGGCGGCACCATGCAAATG 21386 |||| | |||||||| |||| ||| Sbjct 5544 GTCAACATTGGCGGCACTCTGCAGATG 5570 >seq215851 Length=1992 Score = 123 bits (136), Expect = 2e-23 Identities = 226/331 (68%), Gaps = 0/331 (0%) Strand=Plus/Plus Query 21063 GGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTATATA 21122 || ||||||||||| || ||| | || | ||||| || || || || || | || || Sbjct 557 GGCGTAAACAAAGTAATTCTGGTCGGGAATCTGGGTCAGGATCCAGAAGTCCGTTACATG 616 Query 21123 CCAAATGGCGGCGCGGTCGGAAGACTCAGCATCGCAACGAATGAATCATGGCGCGACAAG 21182 || || |||||||| || | | | | | | || || ||| ||||| ||||| Sbjct 617 CCGAACGGCGGCGCAGTGGCCAACATTACCCTGGCGACCTCCGAAAGCTGGCGTGACAAA 676 Query 21183 CAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAAAACTT 21242 || ||| ||||||||||| | || || ||||| || || ||||||| ||||| Sbjct 677 GCGACCGGCGAACAGAAAGAGAAGACCGAGTGGCACCGCGTTGTGCTGTTCGGCAAACTG 736 Query 21243 GCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGAAACTT 21302 |||||| | ||| | || || | || ||||| ||||||||||| |||||||| || Sbjct 737 GCTGAAGTGGCGGGCGAATACCTGCGCAAAGGCTCTCAGGTCTATATCGAAGGCTCCCTG 796 Query 21303 AAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTATCGTC 21362 | |||||||| ||| ||| | ||| || || ||||| || || || | || Sbjct 797 CAGACCCGTAAATGGCAGGATCAGAGCGGCCAGGATCGCTACACCACCGAGATCGTGGTT 856 Query 21363 AGCCAGGGCGGCACCATGCAAATGATCGGCG 21393 | | |||||||||||||| ||| | |||| Sbjct 857 AACGTCGGCGGCACCATGCAGATGTTGGGCG 887 >seq245427 Length=2317 Score = 113 bits (124), Expect = 3e-20 Identities = 241/360 (67%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 7838 CGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCC 7897 |||| || ||||||||| | |||||| | ||||||| ||| || || || || || Sbjct 702 CGAACCACGTTGGCCAGGGCAAATAACGTGGCCAGTTTGTTGTCATTCTTTTCCAGTCCA 761 Query 7898 TTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATGGGTGCTCCACC 7957 |||| || |||| ||| ||||| || | |||||| || ||||| ||||| ||| Sbjct 762 CGATATCGGGTTTTCCGGAATCCGAATTGGCACTTGATAATTCGAAAGACATGCTCGACC 821 Query 7958 CTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTCTTGCGTGGA 8017 | | ||||| || || || || |||||||| || | || || || |||| ||| Sbjct 822 TTCGATCGGATACTCGCCTTGATATATTCGATCTTTAGTTCCCGCTTATTGATGCGAGGA 881 Query 8018 TGCTGTTTCAAGGTTCTTACCTTGCCGGGGCGCTCGGCGATCAGCCAGTCCACATCCACC 8077 |||||||||| | | || || ||||| | ||||| | |||||| | ||| | Sbjct 882 TGCTGTTTCAGAGAGGTCACAGGACCTGGGCGTTGCGCGATAAACCAGTCAATATCGGCA 941 Query 8078 TCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAGACAAATTGC 8137 | || || |||| | ||| | || || |||||||| | ||| ||| | Sbjct 942 TATTTTAGTGCCCCGCGTTTCTCTATCCCGCGATAACCCGCATCGGCAAAAACATATTTC 1001 Query 8138 TCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCCGCGGTGGTG 8197 || |||||||| || || | ||| || ||||||||||| ||||| ||||| ||| Sbjct 1002 TCGGTGCCATGCAGAAGGTTTACTGCCTGGTTCAGGTCATGCTCATTGGCGGCGGTAGTG 1061 >seq166947 Length=2932 Score = 102 bits (112), Expect = 5e-17 Identities = 178/256 (70%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 72261 ATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAAGATAACCGAACGCTGGAA 72320 ||| |||| ||||||||||| |||||| ||| | ||| || || || || | |||| Sbjct 2 ATGGTCGATTACCTGCAACTGATGCGCTGCCCAG---GGCAGGAAAATCGCACTCAGGAA 58 Query 72321 ATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACCGGTGGTG 72380 ||||| || || || ||| ||||| |||||||| || ||| | | || || ||| Sbjct 59 ATTGCGGAAATCTCCCGCAGCCTGAAAGCGTTGGCCAAAGAACTTGATTGTCCCGTCGTG 118 Query 72381 GCATTGTCACAACTTAATCGATCGCTTGAACAG-CGTGCGGACAAACGACCGGTAAATTC 72439 || | || || | || || || ||| | || ||||| |||||||| || | ||| Sbjct 119 GCTCTATCTCAGTTGAACCG-TCAGTTGGAAAGCCGTGCTGACAAACGGCCCTTTAATGG 177 Query 72440 AGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCG 72499 ||| | ||||| || || ||| | |||||||| || || |||| ||| | || || Sbjct 178 TGATCTGCGTGACTCCGGTGCATTGGAGCAGGATGCGGATGTGATCGCGTTCATCTACCG 237 Query 72500 CGACGAAGTTTATCAC 72515 || ||||||||| || Sbjct 238 TGATGAAGTTTATTAC 253 >seq150930 Length=2284 Score = 87.8 bits (96), Expect = 1e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 70933 GGCCCTTTAGCTCAGTGGTTAGAGCTGGCGACTCATAATCGCACGGTCACCGGTTCAAGT 70992 ||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||| Sbjct 638 GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTCAAAC 697 Query 70993 CCGGTAGGGGCCACCATATTT 71013 || ||||||||||| |||| Sbjct 698 CCAACAGGGGCCACCAAATTT 718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 301915517377248