Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_006548.1 Length=38439 Score E Sequences producing significant alignments: (Bits) Value seq121209 172 1e-38 >seq121209 Length=3652 Score = 172 bits (190), Expect = 1e-38 Identities = 362/532 (68%), Gaps = 16/532 (3%) Strand=Plus/Minus Query 2576 CCATGTCACACCCCCGCGATATCAAGAG-GAATGGAGCGGTACTGGTCGGTGTCCCCGAC 2634 |||| ||| |||||||| |||||||||| || |||| |||||||| ||| |||| || || Sbjct 3576 CCATATCAGACCCCCGCAATATCAAGAGAGATTGGA-CGGTACTGATCGCTGTCGCCCAC 3518 Query 2635 CCGCTCCTGGATACGCACGTA----CGCCTTGGTGCTCACGACCTGGACAGCCTCGCCGA 2690 ||||| | | || | ||| || ||| | || ||||| || || ||||| | Sbjct 3517 GCGCTCATAAACGCGGATGTAGGAACGACTT----CCGACCACCTGAACCGCTTCGCCAA 3462 Query 2691 TGGCCTGCATTGCAC-GCTGCCAACGTTCGTCATCGATCTGCAGGCGGCGCAGGGCAAGC 2749 | |||||||| || ||| ||| || |||||||| || | |||||||||||| || ||| Sbjct 3461 TCGCCTGCATGGCCTTGCT-CCAGCGCTCGTCATCAATTTCCAGGCGGCGCAGTGCCAGC 3403 Query 2750 ACGCTGCCGGTACGGATGTTCCCAGCTTGGTCCACGCGGAACGCATCGTTGATCA--GCG 2807 ||| | |||| | | || | | || |||| || ||| || | ||| Sbjct 3402 ACGGCGGCGGTGTTTACTTCGCCTTCCTTCTCAGTCTGGAAGGCGCGGTTAATGATGGCG 3343 Query 2808 TGATGACCTCCGCGCGAGCACCTTCCGTCCATTCGTGGAGGCACTCGTCGATCAGCGCCT 2867 || || ||||| || |||||||| ||||| ||| |||||||| || ||||||| | Sbjct 3342 TG--GATCTCCGGACGCGCACCTTCGGTCCAGTCGGACAGGCACTCATCAATCAGCGATT 3285 Query 2868 TGGCCGCCTGCAGGCGCTCGTCGAAGGCGATGTTGTCGGCCATGGCCCGAATGACCTTGT 2927 | ||||||||||||||||| ||||| ||||| ||| ||| || || | ||| | Sbjct 3284 TTGCCGCCTGCAGGCGCTCATCGAACGCGATACGGTCCTGCATAGCACGCTGAATCTTAT 3225 Query 2928 AGCGACCGTCGAAGCTGACCAGAGAGGCGTTGCCCTTCTTGCCTCCTACCTTCGCCTGGT 2987 |||| || || || ||| || | | | ||||| || || || || | | | | | Sbjct 3224 AGCGGCCATCAAAACTGTAGAGTGTGACATTGCCTTTTTTACCGCCCAGCGACACACCAT 3165 Query 2988 ACTGCTCGGCCGACAGGGTGATGAAGGCTTCGATATCGCCGAATGTTGCCAGTTTGAAAT 3047 | | | ||| |||||| | ||| || | |||||| || || || |||||| | Sbjct 3164 ATTCATTGGCAGACAGGTCAACGAACGCGCCAATATCGGAAAAGCCTGACAATTTGAACT 3105 Query 3048 CCAGCAACGCCTTGTTCAGAGCCTTCCCCTTGGCAACGATCTCCTGCACAAG 3099 | || |||||||||||| || | | | ||| ||| |||||||| || Sbjct 3104 CGGCCAGCGCCTTGTTCAGCCCCAGCGCGCGGCCAATGATTTCCTGCACCAG 3053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122362123621056