Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_006636.1 Length=15876 Score E Sequences producing significant alignments: (Bits) Value seq331287 232 7e-57 SEQ56690 86.0 6e-13 SEQ52087 84.2 2e-12 seq228802 82.4 8e-12 >seq331287 Length=19190 Score = 232 bits (256), Expect = 7e-57 Identities = 491/732 (67%), Gaps = 3/732 (0%) Strand=Plus/Minus Query 6749 AACCAAAAAATAAAGCACAAGATTATTAACAAAAATATAGTGATTAGCAGTTTGCATACT 6808 || || ||| ||||| | || ||||||| ||||||||| || || || | | || || Sbjct 3925 AAACAGAAAGTAAAGTAAAATGTTATTAATAAAAATATATTGGTTTAAAGATAGGATGCT 3866 Query 6809 AAATCTCCTCTGCTGTCTCACTTTTACCACCGTTGAAGGCACTGATATACTCGCAGTGTG 6868 | | | || |||||||| | || | || ||| || ||||||| || | | Sbjct 3865 ACAATTTCTTTGCTGTCTGATCTTCAAAACTACTGATGGTACTGATACTGATGCTGAATA 3806 Query 6869 TGCTATCTGGTACAAGCATATGTCTGCAACACAATAGGCAGCAGTTCTTCCAACACCTTT 6928 || | |||||||| || ||||| || || | |||||||||||||||| Sbjct 3805 AATTAGACGATACAAGCAGATATCTGCGGCAATGAAGCCTCCAGTTCTTCCAACACCAGC 3746 Query 6929 CTCCCCATGAACGACAATTGGCCCCGGCAGAACTTGGTTAGTCTTCAACACTTTTCTGAA 6988 || | || || |||||||| || |||||| ||||| | | |||| ||| ||| Sbjct 3745 GTCACTGTGGACAACAATTGGACCTGGCAGAGGTTGGTGATTTGTCAATGCTTCGACGAA 3686 Query 6989 ATAAGCTTGGTCCTTTCTATTGACGGCTAACAAGAAGTCAATGACCTCTTTAATGTCCGG 7048 || ||||| | || |||||||| || || ||||| ||| | || || ||| || Sbjct 3685 GAAATTTTGGTACGTTTTATTGACGACTGTCAGGAAGTTAATAAATGCTCTAGTGTTTGG 3626 Query 7049 AGCTTCATTTTCTGGCCAGTTTAAGTACTTAAAATGGTGGATGACCCTTACTTCTCCAGT 7108 | | | ||||||||||| |||| ||| |||||||| || ||||| ||||||||| Sbjct 3625 ATCGCCGGATTCTGGCCAGTCCAAGTGCTTGAAATGGTGAATTGTCCTTATTTCTCCAGT 3566 Query 7109 TTCTAAGTGAGTTACCTTCAATGTTGTTTTGGTGTAGTAGGAATTAAGCTTAACGCGTTC 7168 | || | ||| || | || || | | | |||| | | || |||| | | Sbjct 3565 GTGTATATAAGTAACATGTAAAATTCTCTCGCTGTAATCCTGCTCCAGTTTAATGTCCCC 3506 Query 7169 TTCCTTGATGATAAACTCCTTAATCAGTGTGTTATCTTGAGTGGCCGCGAAATACTGGAG 7228 ||||||||| |||||||| || | | |||||||||||| | | ||||||||||| | Sbjct 3505 TTCCTTGATTATAAACTCTTTTAATATCGTGTTATCTTGATTAGGAGCGAAATACTGAAT 3446 Query 7229 GTTCCTTGGTTCTGATTGTTGCTTGGTGCCGTTTAACATCACAATTACCCGAGAGTTCTC 7288 | || | | | | || || || ||| || | ||||||||| | || |||| ||| Sbjct 3445 ACACTCTGCCTGTAACTTTTTCTCGGCGCCATTCAGCATCACAATAATGCGGGAGTCCTC 3386 Query 7289 CTGCCAGATCATTTTCCAAAAATCATTGAAAGTTCCGGGCATTGGCTCTTGCGTTGCTAT 7348 ||||| | ||| | ||| ||||| ||||| || ||||| || |||||||| ||||| Sbjct 3385 TTGCCAAACCATGTGCCAGAAATCGTTGAATGTGATTGGCATCGGTTCTTGCGTCGCTAT 3326 Query 7349 AAATTTGGCACTCATGTCAAATCCAGAGACATAATTGGCGTTGATGTAATCCAAGCTGTT 7408 ||||| ||| | ||| |||||| | || |||| |||||||| ||| | | | Sbjct 3325 GAATTTTTTACTGTTATCATATCCAGCCATGTAGCTGGCATTGATGTAGTCCGACCCATC 3266 Query 7409 GTTGGATTTA---AGGACCACCCTAGAAGTGTCCCAACATGGATAGTCCGCACATCGGTT 7465 || || |||| | ||||| | || |||||||||||| ||||| | || || Sbjct 3265 GTAGGTTTTATACAAAACCACACGGGAGACGTCCCAACATGGGACGTCCGAGTAGCGATT 3206 Query 7466 CTTGTTCTTGTT 7477 | | |||||||| Sbjct 3205 CCTTTTCTTGTT 3194 Score = 84.2 bits (92), Expect = 2e-12 Identities = 107/141 (76%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 9650 AAAGGAA-GTTTGTGATAGTCAAAAATTCTGGACCAGAAGTTGATTCCTACAATTTTTGG 9708 ||||||| |||| || | || | || || | || |||||||||||||||||||||||| Sbjct 4902 AAAGGAAAGTTTATGGTTGTAGACAACTCAGCTCCCGAAGTTGATTCCTACAATTTTTGG 4961 Query 9709 AGCTTC-ATATGGGAAAAGTGTTACAAAGTGATCGTTAGATTGGACGCGA--CA-TCAAA 9764 | |||| |||||||||| || | |||||||||| ||| | ||| || || || | Sbjct 4962 A-CTTCAATATGGGAAAGCAATTGCCAAGTGATCGTGAGACTTGACAAGAATCACTCGAC 5020 Query 9765 GACGCATAATTGGCTGAACAA 9785 | |||| |||||||||| || Sbjct 5021 AAAGCATCATTGGCTGAATAA 5041 >SEQ56690 Length=29381 Score = 86.0 bits (94), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1435 ATGTCTCAGATAGCTTAACTGGAAGTGCCCTTGGTGCGCAACCAAAAGAAACCGGGTTCG 1494 ||||||| ||||||||||||||||| | |||| | ||| || | | || | || |||| Sbjct 17879 ATGTCTCGGATAGCTTAACTGGAAGAGTCCTTAGCGCGTAATCGAGTGAT-CTGGATTCG 17937 Query 1495 ATTCCCGGGCCGGGCTGTCCGAATTAtttttt 1526 |||||||| || ||||||||||||||||||| Sbjct 17938 ATTCCCGGTCCAAGCTGTCCGAATTATTTTTT 17969 Score = 80.6 bits (88), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 10634 TGTCTCAGATAGCTTAACTGGAAGCGCCCTTAGTGCGCAACCAAAAGAAACCGGGTTCGA 10693 |||||| ||||||||||||||||| | |||||| ||| || | | | | | || ||||| Sbjct 17880 TGTCTCGGATAGCTTAACTGGAAGAGTCCTTAGCGCGTAATCGAGTG-ATCTGGATTCGA 17938 Query 10694 TTCCCGGCCGGGGTTGTCCGAATTATTTTTT 10724 ||||||| | | ||||||||||||||||| Sbjct 17939 TTCCCGGTCCAAGCTGTCCGAATTATTTTTT 17969 >SEQ52087 Length=11363 Score = 84.2 bits (92), Expect = 2e-12 Identities = 148/211 (70%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 7242 GATTGTTGCTTGGTGCCGTTTAACATCACAATTACCCGAGAGTTCTCCTGCCAGATCATT 7301 |||| ||||| ||| ||| ||||||||||||| | ||||||| || ||| | | ||| Sbjct 6670 GATT-TTGCTGGGTTCCGCTTAACATCACAATAATGTGAGAGTTTTCTTGCAAAACCATA 6728 Query 7302 TTCCAAAAATCATTGAAAGTTCCGGGCATTGGCTCTTGCGTTGCTATAAATTTGGCACTC 7361 |||||||| |||| || || | ||| || ||||| ||||| |||||| | ||| Sbjct 6729 TTCCAAAAGTCATCAAACGTGTCTTCCATAGGATCTTGTGTTGCAATAAATCCCGTACTA 6788 Query 7362 ATGTCAAATCCAGAGACATAA-TTGGCGTTGATGTAA-TCCAAGCTGTTGTTG--GATTT 7417 | |||||||| | |||| || |||| |||||| || || || ||| ||||| Sbjct 6789 TAATTAAATCCAGCTATATAATTTTGCGTGTATGTAACTCGAATCTCCACTTGTAGATTT 6848 Query 7418 AAGGACCACCCTAGAAGTGTCCCAACATGGA 7448 | | ||| | ||| | |||||| | ||| Sbjct 6849 CAAAATCACTCGGGAAATATCCCAAAAAGGA 6879 >seq228802 Length=80453 Score = 82.4 bits (90), Expect = 8e-12 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1437 GTCTCAGATAGCTTAACTGGAAGTGCCCTTGGTGCGCAACCAAAAGAAACCGGGTTCGAT 1496 || ||||||||||||| |||||| || || ||||| ||| | | | | || |||||| Sbjct 23972 GTGTCAGATAGCTTAAATGGAAGAGCACTCGGTGCAACACCGTAGGGATCTGGTTTCGAT 24031 Query 1497 TCCCGGGCCGGGCTGTCCGAATTAtttttt 1526 |||||| | ||||| ||||||||||||||| Sbjct 24032 TCCCGGTCGGGGCTATCCGAATTATTTTTT 24061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50475531077216