Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_006643.1 Length=12903 Score E Sequences producing significant alignments: (Bits) Value seq103225 161 8e-36 SEQ43881 120 2e-23 seq156906 93.3 3e-15 >seq103225 Length=6573 Score = 161 bits (178), Expect = 8e-36 Identities = 192/260 (74%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 4330 CTTCAGTCCAGGAATTGGTGAACAGGAAACTGTGTTCCGTTAATTTTTCCGTTGTGCTGC 4389 ||||||||||| |||||||||||| | ||||| | |||| ||| | ||| | Sbjct 251 CTTCAGTCCAGAAATTGGTGAACAA-------TTTTCCGC--AGTTTTTCGTAGGGCTCC 201 Query 4390 GGTTTCTTGCAAAATGGTCATCATCTTAGCGTCATTACACTTGTAAGCGAGATGGTATGG 4449 | |||||||| | ||||||| || ||| |||| ||||| ||||||| ||| || Sbjct 200 ATTCTCTTGCAAGAAATCCATCATCCGAGTGTCCTTACGCTTGTGAGCGAGAAAGTACGG 141 Query 4450 AGTCTGCTGAGCGTAGTTTAGAGCTTCTATGTTTACTTGGGGTTGCCGGCACAGCCATTC 4509 |||||||||||||||||||| ||| |||||||| ||||| |||||| |||| | ||| | Sbjct 140 AGTCTGCTGAGCGTAGTTTAAAGCCTCTATGTTAACTTGCGGTTGCTGGCATAACCACTT 81 Query 4510 AGCCAACTCGTAGTTCTTTGTTTTTACAGTAATATGCAGAGGTGTATCACCATTAATGCT 4569 || || ||||| || || |||| | || ||||| ||||||||||||| || | Sbjct 80 TGCTAAACTATAGTTGTTCATTCTTACTGCGATGTGCAGCGGTGTATCACCATGCATTTT 21 Query 4570 TTCCTTTGCATTGATATCTG 4589 ||| || ||||| | |||| Sbjct 20 TTCTTTAGCATTAACGTCTG 1 >SEQ43881 Length=4967 Score = 120 bits (132), Expect = 2e-23 Identities = 159/222 (72%), Gaps = 9/222 (4%) Strand=Plus/Minus Query 5178 TCAGACGTTTCACCATTCACAGGGTCGTCACAGGCGGCACCGTTGGTTCTCATTGTTAGA 5237 ||||||| ||| | | |||||| |||||||| | | ||| ||| || || Sbjct 4418 TCAGACGATTCGCTTTCCACAGGCTCGTCACACGGTGTACCCTTGTTT---------AGT 4368 Query 5238 AGATCCATCTTTTTCTCACCATAAGCATAGTACACCAGATGATACGGGGTTGGAAGCATG 5297 ||||||||| | |||| ||| |||| ||| |||| | ||||||| | |||||||| Sbjct 4367 AGATCCATCATCTTCTGGTCATGGGCATGGTATGCCAGGTAATACGGGATCTGAAGCATG 4308 Query 5298 TAGTTGATGGCTCCACCAATGACACTAGATTCTCGACAAAACCACTCAGCTAATTAATAT 5357 |||||||| || | |||||| |||||| | || ||| ||||| || ||||||| ||| Sbjct 4307 TAGTTGATCGCATCTCCAATGCAACTAGACTGTCCACATAACCAATCCGCTAATTCATAG 4248 Query 5358 TTTCTTTTATTGACAGCAATATGAAAAAGATAATTTCCAGTT 5399 || | | ||||| || || |||| |||| ||| ||| ||| Sbjct 4247 TTCTTCCTGTTGACGGCGATGTGAAGAAGAGAATCTCCGGTT 4206 Score = 113 bits (124), Expect = 4e-21 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 4592 CCCCATTCCATTAAACGCCTACAtttttttCTGGGATCAATTTTGTCTTCACGGGCAACA 4651 |||||||||||||||||| | ||| || |||| ||| | | || || |||||| Sbjct 4965 CCCCATTCCATTAAACGCTCAAGTTTCCTTATGGGGTCAGTATAATCATCCATCGCAACA 4906 Query 4652 ATATGGATACATTGTTGTCCTTGGGAATTGTATTCTGTTACTAAGTATCTGTTTTCATCA 4711 ||||| | || |||| ||| ||| |||||||| | |||| || ||| ||||| Sbjct 4905 ATATGCACGCACTGTTTTCCCTGGCGGTTGTATTCACTCACTAGATACTGGTTCTCATCT 4846 Query 4712 ATGATGGCGTTTTTGTAATTTAACAAGTCAACTACTCCCCCATTACGGCACAAATAGTGA 4771 | ||| | ||||||| | || || || | | ||| ||||| || || || || ||| Sbjct 4845 ACGATAGGGTTTTTGAAGACTACCATATCGATGATTCCTCCATTGCGACAAAACTAATGA 4786 Query 4772 AGAATATTTTCACCCTCGCGGCTGTGT 4798 |||||||||||||| |||||||| ||| Sbjct 4785 AGAATATTTTCACCATCGCGGCTATGT 4759 >seq156906 Length=48909 Score = 93.3 bits (102), Expect = 3e-15 Identities = 245/372 (66%), Gaps = 3/372 (1%) Strand=Plus/Plus Query 4471 AGCTTCTATGTTTACTTGGGGTTGCCGGCACAGCCATTCAGCCAACTCGTAGTTCTTTGT 4530 ||| || || | |||| || ||| |||||| ||||||||| | | || || ||| Sbjct 19804 AGCCTCCATATCCACTTCAGGCTGCTGGCACAACCATTCAGCAACTTTATAATTATTTTC 19863 Query 4531 TTTTACAGTAATATGCAGAGGTGTATCACCATTAATGCTTTCCTTTGC-ATTGATATCTG 4589 ||| | |||||| | ||||||| | | | ||| |||||| ||| | ||| Sbjct 19864 ACATACCGCAATATGTGATGCCATATCACCGTAATT--TTTTCTTTGCTATTTAAATCCA 19921 Query 4590 CACCCCATTCCATTAAACGCCTACAtttttttCTGGGATCAATTTTGTCTTCACGGGCAA 4649 | ||||| | ||| | | || | | | | | ||||||| ||| || | | ||| Sbjct 19922 CGCCCCAGTTCATCAGAAGCTTGAGTGTATGAATAGGATCAACTTTATCCTGGCTCACAA 19981 Query 4650 CAATATGGATACATTGTTGTCCTTGGGAATTGTATTCTGTTACTAAGTATCTGTTTTCAT 4709 | || || | | |||||| |||| ||||||||| | | |||||| | ||||||| Sbjct 19982 CTATGTGAACATATTGTTTACCTTCACGATTGTATTCCGACAGCAAGTATATATTTTCAT 20041 Query 4710 CAATGATGGCGTTTTTGTAATTTAACAAGTCAACTACTCCCCCATTACGGCACAAATAGT 4769 ||| || || || || | || || |||| ||||| |||||| | || ||||| Sbjct 20042 CAACAATAGCATTCTTAAAGGCTAGCAGATCAATAACTCCTCCATTATGACAGCGATAGT 20101 Query 4770 GAAGAATATTTTCACCCTCGCGGCTGTGTTCACCAGGAAAGATAAAGTTTTCCGATGGCC 4829 |||||||||| |||| || | | ||||| || ||| | ||| | || | ||||| Sbjct 20102 GAAGAATATTCTCACATTCATGATTTCTTTCACAAGTAAAAACAAATTCTTTTGGTGGCC 20161 Query 4830 ACATATCTCAAC 4841 |||| | | ||| Sbjct 20162 ACATGTGTAAAC 20173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41008992553344