Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_006644.1 Length=16103 Score E Sequences producing significant alignments: (Bits) Value seq273009 212 6e-51 seq341212 187 3e-43 seq183154 100 3e-17 >seq273009 Length=39064 Score = 212 bits (234), Expect = 6e-51 Identities = 281/386 (73%), Gaps = 3/386 (1%) Strand=Plus/Plus Query 4659 TCTCATTTCTTGCATTTTGTTACGAATAGTGTTCAAAATCAGCTGCGAATCAAATTCAAC 4718 |||||| ||||| ||| | ||||||| | | || ||||| || ||| |||| ||| Sbjct 7294 TCTCATGTCTTGTATTATATTACGAAGACTATTTAAAATAGATTGTATATCTAATTGAAC 7353 Query 4719 CCATTTTTGCCCAGTCGCATGTTTTTTAACATAGTTCAATAAAACAGTTCTTGCATGTTC 4778 |||||| | | | |||| | || |||| ||||||||| |||||||||||||| || Sbjct 7354 CCATTTATTTTTAATTGCATCGTCTTCAACAAAGTTCAATAGAACAGTTCTTGCATTGTC 7413 Query 4779 ATCTAGACCGGGCCTTACACTTGTTCCCTCCA-AGTCAAATGCATTGGCttttttt-CCA 4836 ||||| || || || ||| ||| ||| || ||| ||||| ||||||||||| | ||| Sbjct 7414 ATCTAATCCAGGTCTAACATTTGATCCATCAGTAGT-AAATGAATTGGCTTTTTCTACCA 7472 Query 4837 GTTAGAGAACATATACTTAATGCGTTCTCGGTAAAAATTTCCAGTAACAACGATCGTGCA 4896 |||| |||||| |||| ||||| | || ||||||||||| | ||| ||| |||||||| Sbjct 7473 GTTAATGAACATGTACTCAATGCACTTTCAGTAAAAATTTCTACTAATAACAATCGTGCA 7532 Query 4897 AGAGTTTTGCTGTCTTTCGACATTATTTTAATATTACTTAGTTGAATGGCGTCTATGTAC 4956 || ||||| || ||||| || | ||||| ||| || ||| ||||| | | || Sbjct 7533 AGTGTTTTACTATCTTTTGATAACCTTTTACAATTGCTAAGTCTGATGGCATTGACATAT 7592 Query 4957 ACCCGTGAATGTGGTAGAAGTTCAACGAGACCACTTTTCTTTTCCCGATGCTTTAGGGTC 5016 | |||||| || ||||||||||||||||| | | ||||| ||| | | ||| Sbjct 7593 ATATTTGAATGCGGCAGAAGTTCAACGAGACCTTCTGTTTTTTCATGATATCTCAAAGTC 7652 Query 5017 CATCTTGAGTCATTCGGATCGTATTC 5042 || |||||||||| |||||| || Sbjct 7653 TATTTTGAGTCATTTTCATCGTAATC 7678 Score = 129 bits (142), Expect = 6e-26 Identities = 160/214 (75%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 9027 ACCAGTTTCAAATTCGATACTAGCAGGAAAAGATAGCCATTTTTCACGAGGTGGTTCCTT 9086 ||| ||||| ||||| || ||||||||||||| |||||| | |||| |||| || | | Sbjct 14786 ACCTGTTTCGAATTCAATCGTAGCAGGAAAAGACAGCCATCTATCACTAGGTTGTATCAT 14845 Query 9087 CTTTTGCACTGTATCTGAGAGTTTTGTTTTGTTCATTAATGGAAAGGCT---ATCATA-G 9142 |||| | | | | ||| ||||| |||| |||| |||| ||||| | | |||||| | Sbjct 14846 CTTTCGAATGGAAAGTGAAAGTTTAGTTTCGTTCCTTAACGGAAATGTTGTCATCATACG 14905 Query 9143 C--ATCTTCCTTTGAACCCGCTAAAATCCATGTAGATGGTACTATTTGATATTCTTCTGT 9200 | ||| || | || ||||||||||||||| |||||||| |||||| |||||| Sbjct 14906 CTGATCATCAATAGA---TTCTAAAATCCATGTAGCTGGTACTACTTGATACATTTCTGT 14962 Query 9201 TTCC-aaaaaaaGCATTTCACGGAACTTAACAAC 9233 |||| ||||||||||||| ||| ||||| || Sbjct 14963 TTCCAAAAAAAAGCATTTATAAGAATTTAACTAC 14996 >seq341212 Length=34660 Score = 187 bits (206), Expect = 3e-43 Identities = 287/406 (71%), Gaps = 15/406 (4%) Strand=Plus/Minus Query 4660 CTCATTTCTTGCATTTTGTTACGAATAGTGTTCAAAATCAGCTGCGAATCAAATTCAACC 4719 || || ||||| ||||| ||||| | | | || ||||| ||| | || |||| |||| Sbjct 23846 CTAATCTCTTGTATTTTATTACGGAGACTATTTAAAATAGACTGTGTGTCTAATTTAACC 23787 Query 4720 CA----TTTTTGCCCAGTCGCATGTTTTTTAACATAGTTCAATAAAACAGTTCTTGCATG 4775 || ||||| | | |||| | || |||||| || || |||||||||||||||| Sbjct 23786 CAATGATTTTT----AATTGCATAGTCTTCAACATAATTTAACAAAACAGTTCTTGCATT 23731 Query 4776 TTCATCTAGACCGGGCCTTACACTTGTTCCCTCCAAGT--CAAATGCATTGGCttttttt 4833 ||||||| || || || | | | ||| || ||| |||||||||| |||||||| Sbjct 23730 GTCATCTAATCCAGGTCTAA---TCGATCCATC--AGTAACAAATGCATTAGCTTTTTTA 23676 Query 4834 CCAGTTAGAGAACATATACTTAATGCGTTCTCGGTAAAAATTTCCAGTAACAACGATCGT 4893 || |||| || || |||||| || | || | ||||||||||| ||||| | ||| Sbjct 23675 CCTGTTAAGGAGCACGTACTTAGAGCACTTTCAGGAAAAATTTCCAACAACAATAAACGT 23616 Query 4894 GCAAGAGTTTTGCTGTCTTTCGACATTATTTTAATATTACTTAGTTGAATGGCGTCTATG 4953 ||||| ||||| || ||||| || | | |||| |||||| || | | || | | | Sbjct 23615 GCAAGTGTTTTACTATCTTTAGATAATCGTTTACAATTACTAAGACGTAAAGCATTGACG 23556 Query 4954 TACACCCGTGAATGTGGTAGAAGTTCAACGAGACCACTTTTCTTTTCCCGATGCTTTAGG 5013 || || |||||||||| ||| ||||| ||| |||||| |||||| ||| | | Sbjct 23555 TAAACTTTAGAATGTGGTATAAGCTCAACAAGATCACTTTCTTTTTCCTGATACCTCGAC 23496 Query 5014 GTCCATCTTGAGTCATTCGGATCGTATTCTGGTGGAAAAATAAATT 5059 |||||||| |||||||| ||| || | ||||| ||| |||||| Sbjct 23495 GTCCATCTGGAGTCATTTTTATCATAATTCGGTGGTAAAGTAAATT 23450 >seq183154 Length=21981 Score = 100 bits (110), Expect = 3e-17 Identities = 216/316 (68%), Gaps = 9/316 (3%) Strand=Plus/Minus Query 4743 TTTAACATAGTTCAATAAAACAGTTCTTGCATGTTCATCTAGACCGGGCCTTACACTTGT 4802 || ||| || ||||||| |||||||||||||| || |||| ||||| |||| | | || Sbjct 16630 TTCAACGTAAGTCAATAACACAGTTCTTGCATGCTCGTCTAATCCGGGTCTTATATTAGT 16571 Query 4803 TCCCTC--CAAGTCAAATGCATTGGCtttttttCCAGTTAGAGAACATATACTTAATGCG 4860 | || ||| | ||| || |||||||| || |||| || |||| ||| || ||| Sbjct 16570 GACGTCGGCAA-TGAAA-GCGTTGGCTTTCGCACCCGTTAATGAGCATACACTCAAAGCG 16513 Query 4861 -TTCTCGGTAAAAATTTCCAGTAACAACGATCGTGCAAGAGTTTTGCTGTCTTTCGACAT 4919 | | ||||||||||| || ||| |||||| | ||||| ||| | ||||| Sbjct 16512 CGCCGAGAAAAAAATTTCCATCAATAACATTCGTGCGAATGTTTTATGATCTCTTGACAT 16453 Query 4920 TATTTTAATATTACTTAGTTGAATGGCGTCTATGTACACCCGTGAATGTGGTAGAAGTTC 4979 | ||||| ||| | |||||| ||| | ||| |||| || || || | || ||| Sbjct 16452 TCTTTTACAATTTGCGAATTGAATAGCGCCAATGAACACACGACTTTGAGGCATAACTTC 16393 Query 4980 AACGAGACC--ACTTTTCTTTTCCCGATGCTTTAGGGTCCATCTTGAGTCATTCGGATCG 5037 | | || | | || || |||| || | ||||||||||||| || |||| | Sbjct 16392 GATAATTCCTGGCGATGCTCTT--TGATGTTTCAATGTCCATCTTGAGTTTTTTGGATTG 16335 Query 5038 TATTCTGGTGGAAAAA 5053 ||||| ||||| |||| Sbjct 16334 TATTCCGGTGGCAAAA 16319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51198931895104