Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_006646.1 Length=31972 Score E Sequences producing significant alignments: (Bits) Value SEQ97884 316 4e-82 SEQ43882 156 9e-34 >SEQ97884 Length=35033 Score = 316 bits (350), Expect = 4e-82 Identities = 651/951 (68%), Gaps = 44/951 (5%) Strand=Plus/Minus Query 15579 TTTCATCATTTTAACCTTATAAGTCTGTGGAGGAGAGTAAATCAGCCGAATTTTGCGAGC 15638 |||| || | |||||| | | |||| ||| |||| || |||||| |||||| ||| | Sbjct 31900 TTTCGTCCTCTTAACCCAAAAGCTCTGAGGATAAGAGCAAGTCAGCCAAATTTTCCGAAC 31841 Query 15639 GTCGCTTGGGCAGAACATATTTGGATCATGTCCCTCGAAGAGTCAGGTTCTTGGGAAGTT 15698 | |||| || |||| || | | |||||| | ||||||||| | ||| ||| | Sbjct 31840 TTTGCTTTGGAAGAATATCTCCGAATCATGGAAGTTCGAGAGTCAGGCACCTGGAAAGCT 31781 Query 15699 TTTGCAAAGCTAGAAAATAAGGaaaaaaaCCGAAACAGCTTAGTCCCATGTTGGGATCAC 15758 | ||| | |||||| ||| |||||||||| || || |||| |||||||||||| Sbjct 31780 TCCGCACGACCAGAAAACTGGGATAAAAACCGAATCAA--TA-TCCCTTGTTGGGATCAC 31724 Query 15759 ACTAGGGTTAAGCTGACTGCCGATGATT--CTG-CGTCAGACTACATCCATGCCAATTAT 15815 | | ||| | || | | |||| ||| | |||||| |||| | || ||||| Sbjct 31723 AGCCGCGTTGTGTTGTTTTTGAACGATTTCCTGACATCAGACCACATTTACGCGAATTAC 31664 Query 15816 GTCGGTGGATTTGAAGAAAAGAAGAAGTTCATCTGCACCCAAGCACCGAAAATCAACACA 15875 | ||| || ||||| |||||||| |||||| |||| || ||||||| |||||| Sbjct 31663 GCGAATGGCTTCGAAGACAAGAAGAAATTCATCAGCACGCAGTTTCCGAAAAAGAACACA 31604 Query 15876 TTGGTCGACTTCTACCGGA----TGGTCTGGAATGAAAATAGCCGCATCATCGTCATGCT 15931 || || ||||| ||| |||||| |||||||| ||||| || ||| ||| ||| Sbjct 31603 TTAGTTTCCTTCT---GGACTTCTGGTCTTCAATGAAAACAGCCGTATAATCATCACGCT 31547 Query 15932 AGTGAATGTGAGTT-------CCAGTT--GCTG----TCAGTATTGGCCTTCCAAAAACG 15978 | || | || | | ||| ||| ||| ||||||||| ||| ||| Sbjct 31546 ACTGGACGTTATACAAAATAACAAGTACGGCTACTACTCA-TATTGGCCTGTAAAAGACG 31488 Query 15979 ATGAGACTCTGCAAGCTGGTCAGTTCACGATAAAGAGAA---CGAACGAAGAAACCTTCT 16035 || | ||| || | ||||||||| |||||||| | || | || | || | || || Sbjct 31487 ATCTCATTCTACAGGTTGGTCAGTTTACGATAAAAAAAAAAACTAAAGTAGCATTCTCCT 31428 Query 16036 TTAACTATGTTGCGACGGACTTGACTATAAGTGTT-GGATCTGAAGTATCTCGTAAAATC 16094 ||||| || || |||||| | |||||| | ||| | || ||||| || |||| Sbjct 31427 CTAACTGCATTAAAACAGACTTGGATTTAAGTGATCGGAACGGA-GTATCACGAGAAATT 31369 Query 16095 CGCCACTTTATGTTTACTGGCTGGAGAGAAAATGACGTTCCTGATGACGTAGCTCAGTTT 16154 |||||||||||| | ||||||| |||||| | |||||| |||| || | ||||| Sbjct 31368 TGCCACTTTATGTACCCCGGCTGGACAGAAAACAATGTTCCTAATGATGTTACCGAGTTT 31309 Query 16155 TACCGGTTTGTGCGAAGAACCAATCAAAGTCGCGCAGCAACCGTACGA---TCAACGAAG 16211 || |||||||| ||| ||| |||| || | ||| | ||| | ||| |||| Sbjct 31308 TATAAGTTTGTGCAAAGGGTCAACCAAATGCGTACGGCAGTCATACAAGTATCACTGAAG 31249 Query 16212 CTGAATCAAGG---TCGACCAGGGCCTATCATTGTACACTGTGACACGGGGATTGGCCGA 16268 | | |||| || || || ||||||||||| ||||| || | || ||||| ||| Sbjct 31248 ---AGTAAAGGAAATCTGCCTGGACCTATCATTGTGCACTGCGATATCGGAATTGGGCGA 31192 Query 16269 ACTGGGACCTTTTGCACCGCAGACATCGCGGTCTTGAAGATGATGAAGACCGCAACGATA 16328 || || | || |||||| | |||| |||| | || | | ||||| || || || Sbjct 31191 ACCGGCATCTATTGCACAGTAGACTACGCGATTTTTCAACTAATGAATACTCAAATGACT 31132 Query 16329 TCAATACCAGAAATTGTTGCTCGTGTCCGACAACAAAGACATTCCAGTGTGATCACGTTT 16388 || |||| |||| ||| ||||| |||||||||||||||| || | |||||| Sbjct 31131 TCTTTACCTCAAATCGTTAGAAAGATCCGAAAACAAAGACATTCCAGCGTAACTACGTTT 31072 Query 16389 GAACAATACtttttttGCTATCGTGTTTTAATACACTTTTTGTCGCTTATGTTTCAGAAA 16448 ||||||||||| || ||||||||||| || |||| ||||||||| ||| |||| |||| Sbjct 31071 GAACAATACTTCTTCTGCTATCGTGTGTTGTTACA-TTTTTGTCGGTTAGGTTTAAGAAG 31013 Query 16449 TTAACTGGTAC-GAAAATCAAAATACCTAGATTATAAATTAGAtttttttA 16498 ||| |||||| || || | | || |||||| || ||| ||| || || Sbjct 31012 CTAATTGGTACACAATATGATATTA-CTAGATAATTGATTTTATTGTTATA 30963 Score = 129 bits (142), Expect = 1e-25 Identities = 212/306 (69%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 16766 GGAAGTACTAACGGAAAGGAATAGTGAAGGTGAAAAtttttttCATGAAGCAGCCAGATG 16825 |||| | ||||||||| | || | |||| |||||||| | ||||||||||| || | || Sbjct 30695 GGAAATCCTAACGGAACGAAACAATGAAAGTGAAAATATCTTTCATGAAGCTACCCGGTG 30636 Query 16826 TGGAAGTTTCTCAATTATAGCAAGATTCACGCCATTCATCAGGGGTAATTGTGTAGCAGC 16885 | | |||| || | ||||||||||||||||| ||| | | | | || || || Sbjct 30635 TTGTGGTTTGGCACTCATAGCAAGATTCACGCCGTTCCTTCGTAGAACCGATGCAGTAGA 30576 Query 16886 AGCTCTGAACACAACTAACATTGCCGGACAAATGAGTATCCACGTAGCAGCAGTGACTCA 16945 ||||||||| || |||| | || || ||||| || || || ||||| || | Sbjct 30575 AGCTCTGAATGCATGGAACAATATGGGCCAGATGAGCATTCATGTGGCAGCGACTACATA 30516 Query 16946 TGAAAAATGGTACGCAGCAAAGTTGATTGACATCTTGGTCGAATTGGGAGCTGATATTAA 17005 | | || || || || | ||||| | ||||||| | |||||||||| | |||| Sbjct 30515 TTCAGGATTGTGTGCGATAACGCTGATTAAAGTCTTGGTGAAGTTGGGAGCTGTTGTTAA 30456 Query 17006 TGGACAAGAAAGTGTTGAAGGTAACACCGCTCTTCATCTAGCAGTAAATCGACGTGATTA 17065 ||| | |||| | | ||||| ||||||| |||| |||| || || || | || || || Sbjct 30455 TGGGCCAGAAGGCATAGAAGGCAACACCGTTCTTGATCTGGCCGTTAAGCAACAAGACTA 30396 Query 17066 CCAGCT 17071 |||| Sbjct 30395 TGAGCT 30390 Score = 127 bits (140), Expect = 4e-25 Identities = 235/343 (69%), Gaps = 5/343 (1%) Strand=Plus/Minus Query 25226 AGTCTGTGGAAAAAAGCGAGTCAACCGAATTTTGCAAGTCTTATTTTAGAAGAATATTGT 25285 ||||| | || || ||| | ||| ||||||||| |||| ||| ||| |||||| || Sbjct 24086 AGTCTATTGACAAGAGCAAATCAGCCGAATTTTTCAAGCCTTGTTTGGGAAGAACATCAG 24027 Query 25286 GGGATCATCAACGCACAAGTGTCAGGAACTTGGGAAGCTTTTGCGAAGCCAGAAAATAAG 25345 |||| | | || | ||| | |||| || ||| | ||||| | | ||| |||| | Sbjct 24026 CGGATTGTGAGCGAAGAAGAGCCAGGTACCTGGAATGCTTTCGAAATGCCGAGGAATAGG 23967 Query 25346 GAAAAGAACCGAAACAACTTAGTTCCATGTTGGGATCACACTAGGGTTAAGCTAGCTGCC 25405 || || || | | || ||| ||||||||| |||| ||| || || | ||| || Sbjct 23966 GATAAAAATAGGAGCAGCTTCATTCCATGTTTGGATTCCACGAGAGTGATCTTAGAA-CC 23908 Query 25406 TATGAATCTGCAT----CAGACTACATTCACGCTAATTATGTTGACGGTTTTCAAGATAA 25461 || | | ||| | ||||| || || || || ||||||||||| ||| |||| || Sbjct 23907 TAGCAGCCCTCATAGTTCGGACTATATCCATGCGAACTATGTTGACGGCTTTGAAGACAA 23848 Query 25462 GAAGAAGTTCATCTGTACTCAAGCACCGAAAACCAACACATTGGTCGACTTCTATCAGAT 25521 || |||||||||||||| || || || | | || ||||| | ||||||| | || Sbjct 23847 GAGAAAGTTCATCTGTACACAGGCTCCTATGTCTAATACATTTGAGAGCTTCTATAATAT 23788 Query 25522 AGTCTGGAATCAAAACAGCTGCATCATTATCATGCTGGTGAAT 25564 | ||| || || | | |||||||| |||||||| ||||| Sbjct 23787 GATGTGGTATGAATCCTGTTGCATCATAGTCATGCTGATGAAT 23745 >SEQ43882 Length=4490 Score = 156 bits (172), Expect = 9e-34 Identities = 279/407 (69%), Gaps = 13/407 (3%) Strand=Plus/Minus Query 5380 CACTAGTAACAGGATCGTCACAAACGGCTCCATTGGATTTGAGAATCTCCATCATTCTTT 5439 |||||| | ||||| ||||| | |||||||||| |||||| || ||||||||||| Sbjct 2050 CACTAGCGATGGGATCATCACATGCAGCTCCATTGGTTTTGAGGATATCCATCATTCTGA 1991 Query 5440 GGTCACGGAAAAAGTACGCCAGGTGATACGGAGTCAGATGAGCATAATTGATAGCGATCA 5499 ||| ||| || |||||||||||| |||||||| ||| |||| | | | | || Sbjct 1990 AGTCTCGGGCAAGGTACGCCAGGTGGTACGGAGTTCGATAGGCATCCTGGCTGACACTCG 1931 Query 5500 AATTAGCTTTCAAGTCTCGGCACAGCCACTCAGCTAGTTCATAGTTTTTTGAGCTAACAG 5559 | ||| || ||||||||| ||| | | || || ||| | |||||| Sbjct 1930 GTTC--CTTACA----------CAGCCACTCCGCTGGCTGGTAATTATTTTTGATAACAG 1883 Query 5560 CGATGTGCAGCAACGAATCTCCAGTTAAAGACTCTCTTGCGGAGACATCTGCGCC-CATA 5618 ||||||| ||||| | || || || | |||||| ||||| | | || || || | | Sbjct 1882 CGATGTGGAGCAAGGTATTGCCGGTCACAGACTCCCTTGCATTGGCGTCCGCACCTCGCA 1823 Query 5619 TTCAGAAGCAGCTCGATTTTCATTACTGCATTGTTGAGGTCAAATCTCGCCACCATGTGG 5678 |||| ||||| || || ||||||| ||| | || ||||| | | || |||| Sbjct 1822 TTCAAAAGCACTTCTATCTTCATTAGCGCACTTTTCTGGTCATACCATATTACGTTGTGA 1763 Query 5679 GTGCATAATCTTCCATGATGGTCGTACTCATGAACCAAATGTCCAACATTGCTAAGAAAG 5738 ||||||| |||||| ||| ||| || ||| | | || | || | || || || || Sbjct 1762 GTGCATAGTCTTCCTCGATAGTCATATTCACGTAGCAGACGTTGATTATCGCCAACTAAC 1703 Query 5739 GGTACGGATTCCATGAACTCGAATATATTTCCCGAACGACAAATTGA 5785 ||| | | ||||| || || | |||||||||||||| |||||||| Sbjct 1702 GGTGCTAACTCCATCAATGCGTAGATATTTCCCGAACGGCAAATTGA 1656 Score = 107 bits (118), Expect = 4e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 7553 TTTCGATTGCCACCGAGGACGAACCAACAAAATGGAAGTCAAATACGTAGCTATTCATCA 7612 ||||| ||||| |||| || | ||| |||||||| || | || | ||||| || | Sbjct 362 TTTCGTCCGCCACAGAGGTCGTATCAATAAAATGGACGTTGATTATATTGCTAT-CAACC 304 Query 7613 TCGTGAA-TTAGACACCTATATATTGGTACCGAAGCAATGGCCTAAGCGTGCTAATAGCC 7671 || | || || || || |||||||| | || || | ||||| ||| | | | ||| Sbjct 303 TCTTAAAGTTTGATACTTATATATTACTTCCAAAAGAGTGGCCGCCGCGCGTTTACAGCA 244 Query 7672 TATTTTTGACTTTGGCAGATCAAATAATCGCTCAGTTTAATGAAGTGAGTCCGGTAGTGA 7731 | |||||| ||| || || |||||||| ||| || | | || ||||| | ||| Sbjct 243 TCCTTTTGATTTTAGCGGAACAAATAATAAATCAATTCCAGCATGTTAGTCCCATTGTGC 184 Query 7732 GAATGTGCGACATACCAACTCGGTTAATTTGTCGAGTGGATGATAGTGGGTTCTACTATA 7791 | | ||||||||| |||||||| |||| || || |||| | |||||| || Sbjct 183 AAGTTCATAGCATACCAACCCGGTTAATCTGTCACGTTGAGGATACCGTGTTCTATTACG 124 Query 7792 TATTCAACAAAGTGTCAATAGAGTGAGT 7819 | |||||||||||||| |||||||||| Sbjct 123 TGTTCAACAAAGTGTCTTTAGAGTGAGT 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101755476568704