Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_006648.1 Length=15158 Score E Sequences producing significant alignments: (Bits) Value seq107553 273 2e-69 seq331287 123 2e-24 seq233203 123 2e-24 >seq107553 Length=2914 Score = 273 bits (302), Expect = 2e-69 Identities = 437/627 (70%), Gaps = 3/627 (0%) Strand=Plus/Minus Query 3888 TTCCTTAACATAGACTGCAAGTAATTGGTAACACAAGACATAGTCATCTAAACAATTCAT 3947 ||| || | |||||| | | || ||||||||||| |||||| | ||| || | | Sbjct 1795 TTCTTTGATATAGACATCGACTAGTTGGTAACACAGAACATAGCTACTTAAGCACATTAC 1736 Query 3948 AAATCCGTATTTTTGCTGGCGAACTTTTTTAAGAACACTGGGCAGTGACAGGGTTCCAGT 4007 |||| ||| || || | || || ||||| | | | | |||||||| || ||| || Sbjct 1735 GAATCGGTAATTCTGTTTCCGCACGTTTTTGAAAGTATTTGGCAGTGATAGCAGTCCCGT 1676 Query 4008 TTTGTCAAATTGCGTGGCACATATATCAAATACGCAAAACACCGCAGAGCTACTAATCCC 4067 ||| |||||||| || |||| ||||| || | ||| | || ||||||||| | | || Sbjct 1675 TTTTTCAAATTGAGTTACACAGATATCGAACATGCACTAGACTGCAGAGCTATTGACACC 1616 Query 4068 GTCGAGGCATTGAACAATTATAGGAGCGATTTTCTTATCAGCCGTTTGTCTCTCTAACTG 4127 || || | || | ||| || ||||| |||||| |||| |||| |||| || | Sbjct 1615 TTCAAGACTGTGCAGAATCATGGGAGCAGGTTTCTTGCCAGC---TTGTTTCTCCAAGTT 1559 Query 4128 AAGGCACATGTCTTTGACATTGCAATAAAAATCTATGAATGCATCCGGCTTGTGAGAAAA 4187 || | |||| |||||||| | |||||||| |||||||||||||| |||| || Sbjct 1558 AACATATGTGTCGTTGACATTATGAAGGAAATCTATCAATGCATCCGGCTTATGAGCGAA 1499 Query 4188 GTTATCCCCCGGCCAAGCGGTGTATTGATAATGCGATATTTTTTGCTCCTGGCCAAACTT 4247 ||||||| |||||||||||| ||||| || || |||||||| | ||| | || ||| Sbjct 1498 CTTATCCCTCGGCCAAGCGGTATATTGGTAGTGTGATATTTTGCGTTCCCGTCCTGACTG 1439 Query 4248 GTCGGTCAGACTTAACAAAGTTAAATTAAAATGTGGCTTGATAATAATTTTCAGGGTCTT 4307 ||| || |||||||| ||| || | |||| |||||||| | || | ||| ||||| Sbjct 1438 GTCAGTTAGACTTAAAGCCGTTGAAATGTAATGCGGCTTGATTTTGATCTCCAGAGTCTT 1379 Query 4308 AATTCTGAACTTATCACTAACTTTCACACAGCCCTCCTTTGAGGACCAGTATTGGTAACA 4367 ||| | || || | | ||| || |||||| || || | ||||| |||||||||| Sbjct 1378 AATCTTAAATTTGTTCCAAACCATCGCACAGCTTTCTTTAGGCGACCAATATTGGTAACT 1319 Query 4368 CTTCTTATCACTTAATCGACTGATCAACACTATAATTTGCACTTTGTAATTCGACACCGC 4427 || || || |||| | || ||| |||||| |||| ||| || | | | | || | Sbjct 1318 TTTATTGCCATTTAACCAACGCGTCATCACTATGATTTTCACATTATGGTCCCATACTGT 1259 Query 4428 TTGCCAAAATTTGTCACAGGCATCTTCTTGCAAACGTTTAATGCAAATGTACTTCCGCTC 4487 |||||||| ||||||| | || ||||| | | | | || ||||| ||||||| Sbjct 1258 CTGCCAAAACCTGTCACACCCTTCCTCTTGTGGGCTGTCAGTTCAGATGTATTTCCGCTT 1199 Query 4488 GAAATCATAACCATCGACGAAACTTGC 4514 | | |||||||| || |||||||| Sbjct 1198 GGTGTGGTAACCATCCACAAAACTTGC 1172 >seq331287 Length=19190 Score = 123 bits (136), Expect = 2e-24 Identities = 482/761 (63%), Gaps = 60/761 (8%) Strand=Plus/Minus Query 1866 AAACACAAGGAACGTTTGATGTTTGCACGTCTGAAGAAAACTTCAGGAAAA--ACAGATA 1923 |||| | |||| |||| || | || |||| ||||| || || ||| | ||||| Sbjct 2436 AAACTCCAGGATCGTTCATTGCATCTACATCTGCTGAAAA--TCTGGGAAAGGATAGATA 2379 Query 1924 TCCAGATAAGCCGTGCTTTGATCACAGCAGAGTGATTCTAAGTGAAGGAAACTGTAGCGA 1983 ||| || | || || || |||||| | ||||||||| ||| | || || || Sbjct 2378 CGGAGACAAACTATGTTTCGACCACAGCCGCGTGATTCTATCAGAAAATAGCTCCAGAGA 2319 Query 1984 TTACATCAATGCAAGTCACGTGGATGGCTTTAAGCACCCTAATAAGTTTATAGTGAGTCA 2043 ||||| ||||| ||| || | |||||||| | ||||||| | ||||| || | || Sbjct 2318 CTACATTAATGCCAGTTACATCGATGGCTTCACGCACCCTGAGAAGTTCATCTGCACGCA 2259 Query 2044 GGCACCGCTAGAAGAGACCG-TGTCGGATTGGTGGAAGATGATTTGGGAACAGAAATGTG 2102 || || | || ||| ||||| || |||| ||| | ||||| || || ||| Sbjct 2258 AGCGCCTATGGACACGACAACTGTCGACTTC-TGGAGAATGGTGTGGGAGCACAAGAGTG 2200 Query 2103 AGCTTATTGTCATGTTGTGCAAGCTTGTTGAAAGTGGAAGGAGCCAGT--GCTACCGCTA 2160 || | || || ||| |||||||| ||| ||| || |||| | || | | | || Sbjct 2199 AGATCATCGTTATGCTGTGCAAGAGTGTCCAAAACGG--GGAGACCGTATGTTCTCAATA 2142 Query 2161 TTGGAGCCCAGTTGAAGGAACAACTCTAGAAATTGGAAGTCTAATGGTGAAAACGATCGA 2220 ||||||||||| ||||||| || || || |||||| | | ||| |||| || | Sbjct 2141 TTGGAGCCCAGAAGAAGGAATGACGCTGAAATTTGGAAAACCGAAGGTACAAACAATTAA 2082 Query 2221 AGTTAGTTCGGTCTTTAGGAATTTTCAAATCACGAGGATTGATGTGACGCACAAAGAAAG 2280 |||| | || || | |||| Sbjct 2081 AGTTGATACGATC--------TATTCA--------------------------------- 2063 Query 2281 AGGTAGCTTGAGACTCACTCACTTTTTGTACGAAAAATGGCAAGAGGATTATACTTTTCC 2340 |||| | ||| | |||| ||| | ||||||||| ||| | | || || Sbjct 2062 -------TTGACAGTCAATTACTTCGCGTATGGGGCATGGCAAGAAGATAACATTTCACC 2010 Query 2341 AGAAGAGACAGACTTTCTTCACTTGGTACTGATGATAAAGACACATT-ATCGATGGCTGG 2399 || | ||||||| | |||||| ||||| | | ||| || ||| ||| | | Sbjct 2009 CTTGGAATCTAGCTTTCTTGATTTGGTATTGATG-TCACGACTGTTTAATCATTGGGTAG 1951 Query 2400 TCAACCGAAAATTGGATAATGGCTACCGTACGCATTCCAAAGGTCCGATAGTGGTTCATT 2459 || | | ||| || | ||| |||| ||| | | | ||| ||||| ||||| | Sbjct 1950 ACATACAAGAATCTGAAGACGGCCGCCGTCTGCACCCAAGACCTCCAATAGTAGTTCACT 1891 Query 2460 GCAACAGTGGGCTCGAAAGAGCTATGACATTTTGTGCTGTTGATATTGCGCTGTCTAGTT 2519 ||||| |||||| | |||| | ||| | ||||| ||||| |||||| | | ||||||| Sbjct 1890 GCAACGATGGGCTAGGAAGAACAATGGCGTTTTGAGCTGTAGATATTTCTTTATCTAGTT 1831 Query 2520 TTGTTAAAACATGTAAATTTAACCTTTATTCAATTGTTACGAATCTTAGAAAGCAAAGGT 2579 || |||||||| | ||| ||||| | | ||| | ||||| |||| ||| || |||| | Sbjct 1830 TTTTTAAAACAGGCAAAGTTAACTTGTTTTCTACTGTTAAATATCTCAGACAGAAAAGAT 1771 Query 2580 ACAACTGTCTGTCTGATGTCAATCAGTATGTTTTTTGTTAT 2620 ||||||| || ||| | || ||||| ||| | || || ||| Sbjct 1770 ACAACTGCCTTTCTAACGTTAATCATTATTTATTCTGCTAT 1730 Score = 102 bits (112), Expect = 8e-18 Identities = 209/302 (69%), Gaps = 9/302 (3%) Strand=Plus/Minus Query 13778 TTTGTTCACAATCTTCCAAAAAGATATCAGCTGCGCAGAGTAGAAGGGCGTTTGTT--GA 13835 |||||| || ||| || |||| |||| || || ||||||| ||| || |||||| | Sbjct 5252 TTTGTTGACCATCCTCAGAAAAAATATGAGTTGGGCAGAGTCGAATGG--TTTGTTACGC 5195 Query 13836 TCAGGAAACTCGTGGTATTGGTAATGCGTTATCTTTCTTGACTTATTTTCTTTGTTGTTT 13895 || | || | | ||| ||||| ||||| ||||| |||||||| | | |||||| Sbjct 5194 TCTGTGAAGCCATAGTACTGGTAGTGCGTGATCTTCCTTGACTTTCTAACCGCTTTGTTT 5135 Query 13896 CTTACAGTCAAGGTTATCTGAGTGTAATATTTGTCGGTTATAGTCTTCTTCCATA-GAGT 13954 | || ||||| | | ||| ||||||||||| || | |||||| | ||||| | ||| Sbjct 5134 TTCACTGTCAATATCAGCTGTGTGTAATATTTATCTATGATAGTCCTTTTCCAAATGAGG 5075 Query 13955 AAATTGTCTGACATCGTACGCCAGGGA-TGAATCGCTATTCAGCTATTTTTGTCTTACGG 14013 || | | || ||| |||| ||| || | ||| |||||||| | | || || | Sbjct 5074 AATTCGCCT-ACAGTGTAC-TCAGAGATTTTTTCGTTATTCAGCCAATGATGCTTTGTCG 5017 Query 14014 ATTTACCCTTGTCAAATCGCACTATCACTCTGCTATCAGTCTTCCATA-TCAAGTCCCAA 14072 | | | |||||||| || ||| |||||| || || | | ||||| | |||||| || Sbjct 5016 AGTGATTCTTGTCAAGTCTCACGATCACTTGGCAATTGCTTTCCCATATTGAAGTCCAAA 4957 Query 14073 AA 14074 || Sbjct 4956 AA 4955 >seq233203 Length=13878 Score = 123 bits (136), Expect = 2e-24 Identities = 153/206 (74%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 8413 TTTCGTCTAGATATTTTTGGCTGAGCCCCATTTCCCCTAACACATACATATGAATGGCTT 8472 |||| ||||||| ||||||| | ||||||||||| || ||||| ||||||| ||| Sbjct 2401 TTTCTTCTAGATGCCTTTGGCTCATTCCCATTTCCCCCAAAACATAAATATGAAGTACTT 2460 Query 8473 GATAGCAGAAACTATAGTCATCTGCGTTATAATTCAAGCAGTTGTGCTCTCGCTGTCTTA 8532 |||| || ||| | |||||| | | | || ||||| | || | |||||| | Sbjct 2461 GATAACAAAAAGTGTAGTCAGATAAG---TGGTTTAAGCAACAATACTTTTGCTGTCGCA 2517 Query 8533 -TTTTCCGAGAAGCGTTTGCCACTGAAAGCGCACCTGTGTATTTGAATTCGGTTACACAA 8591 |||| |||| || ||| |||||||| |||||||| |||| |||||| || |||||||| Sbjct 2518 TTTTTTCGAG-AGTGTTAGCCACTGACAGCGCACCAGTGTTTTTGAACTCTGTTACACAG 2576 Query 8592 ATATCGAGGATACAATATATCGCCGA 8617 ||||||| | ||||| | |||||| Sbjct 2577 CTATCGAGAAGGCAATACACCGCCGA 2602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48187417477024