Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_007029.1 Length=6307 Score E Sequences producing significant alignments: (Bits) Value seq273009 187 1e-43 seq341212 183 1e-42 seq183154 143 1e-30 >seq273009 Length=39064 Score = 187 bits (206), Expect = 1e-43 Identities = 284/402 (71%), Gaps = 5/402 (1%) Strand=Plus/Plus Query 1497 TTATCCATATTTAAATCTAAACTCTTGCATTTTATTACGAATACTGTTCTGAATAGATTG 1556 ||||||||| ||| |||| | ||||| ||| ||||||||| ||| || ||||||||| Sbjct 7279 TTATCCATACTTACATCTCATGTCTTGTATTATATTACGAAGACTATTTAAAATAGATTG 7338 Query 1557 AGTGTCTAATGTAATCCAACCTTTCTCACGGCCGTACTCTTCAACATATGTGAGCAACAC 1616 | |||||| || ||| || | | | | ||||||||| | | | | || Sbjct 7339 TATATCTAATTGAACCCATTTATTTTTAATTGCATCGTCTTCAACAAAGTTCAATAGAAC 7398 Query 1617 TGTTCTTGCAGTTTCATCTAATCCTGGTCTGATAGTTGCTCCTTCGACATCGTAA--GCT 1674 ||||||||| | ||||||||||| ||||| | | ||| ||| || | |||| | Sbjct 7399 AGTTCTTGCATTGTCATCTAATCCAGGTCTAACATTTGATCCATCAGTA--GTAAATGAA 7456 Query 1675 CKAGCTCTTGAC-CCGGTTAATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGAC 1733 ||| || || ||||||||||| | |||||||||| | ||| |||||||| || Sbjct 7457 TTGGCTTTTTCTACCAGTTAATGAACATGTACTCAATGCACTTTCAGTAAAAATTTCTAC 7516 Query 1734 CAATAACAATCGAGCCAATGATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTT 1793 ||||||||||| || | || ||| | ||||||||| || || || ||||| ||||| | Sbjct 7517 TAATAACAATCGTGCAAGTGTTTTACTATCTTTTGATAACCTTTTACAATTGCTAAGTCT 7576 Query 1794 TATGGCATTGATGTAGACATTGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTG 1853 |||||||||| || | ||| | ||| |||| ||||| || || || | ||| Sbjct 7577 GATGGCATTGACATATATATTTGAATGCGGCAGAAGTTCAACGAGACCTTCTGTTTTTTC 7636 Query 1854 ACGATGCTTTAAGGTCCATCTTGAGTCATTTTCATCGTATTC 1895 | ||| | || ||| || ||||||||||||||||||| || Sbjct 7637 ATGATATCTCAAAGTCTATTTTGAGTCATTTTCATCGTAATC 7678 >seq341212 Length=34660 Score = 183 bits (202), Expect = 1e-42 Identities = 290/416 (70%), Gaps = 3/416 (1%) Strand=Plus/Minus Query 1497 TTATCCATATTTAAATCTAAACTCTTGCATTTTATTACGAATACTGTTCTGAATAGATTG 1556 ||||||||||||| | |||| |||||| ||||||||||| | ||| || |||||| || Sbjct 23862 TTATCCATATTTACAACTAATCTCTTGTATTTTATTACGGAGACTATTTAAAATAGACTG 23803 Query 1557 AGTGTCTAATGTAATCCAACCTTTCTCACGGCCGTACTCTTCAACATATGTGAGCAACAC 1616 ||||||||| ||| |||| || | | | || ||||||||||| | | ||| || Sbjct 23802 TGTGTCTAATTTAACCCAATGATTTTTAATTGCATAGTCTTCAACATAATTTAACAAAAC 23743 Query 1617 TGTTCTTGCAGTTTCATCTAATCCTGGTCTGATAGTTGCTCCTTCGACATCGTAAGCTCK 1676 ||||||||| | ||||||||||| |||| || | | ||| || | | | || Sbjct 23742 AGTTCTTGCATTGTCATCTAATCCAGGTC---TAATCGATCCATCAGTAACAAATGCATT 23686 Query 1677 AGCTCTTGACCCGGTTAATGAACAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAA 1736 |||| || || ||||| || || | | | ||||| | || |||||||| | ||| Sbjct 23685 AGCTTTTTTACCTGTTAAGGAGCACGTACTTAGAGCACTTTCAGGAAAAATTTCCAACAA 23626 Query 1737 TAACAATCGAGCCAATGATTTGCAATCTTTTGACAATCTCTTGCAATTACTAAGCTTTAT 1796 || || || || | || ||| | |||||| || |||| || ||||||||||| || Sbjct 23625 CAATAAACGTGCAAGTGTTTTACTATCTTTAGATAATCGTTTACAATTACTAAGACGTAA 23566 Query 1797 GGCATTGATGTAGACATTGGTATGGGGCATGAGTTCTACAAGTCCCGGAGCCATTTGACG 1856 ||||||| ||| || || | ||| || || || || ||||| | | ||| | Sbjct 23565 AGCATTGACGTAAACTTTAGAATGTGGTATAAGCTCAACAAGATCACTTTCTTTTTCCTG 23506 Query 1857 ATGCTTTAAGGTCCATCTTGAGTCATTTTCATCGTATTCTGGAGGTAAAACAAATT 1912 || | | | |||||||| |||||||||| ||| || | || |||||| ||||| Sbjct 23505 ATACCTCGACGTCCATCTGGAGTCATTTTTATCATAATTCGGTGGTAAAGTAAATT 23450 >seq183154 Length=21981 Score = 143 bits (158), Expect = 1e-30 Identities = 290/424 (68%), Gaps = 15/424 (4%) Strand=Plus/Minus Query 1519 TCTTGCATTTTATTACGAATACTGTTCTGAATAGATTGAGTGTCTAATGTAATCCAACCT 1578 ||||| |||||| |||| | ||| || || ||||| || || | | ||| | Sbjct 6802 TCTTGAATTTTACTACGTACACTATTTAAAACGGATTGCGTATCATACACCACTCAATCA 6743 Query 1579 TTCTCACGGCCGTACTCTTCAACATATGTGAGCAACACTGTTCTTGCAGTTTCATCTAAT 1638 || | | || ||||||||||| |||| | ||| || |||||||| |||||||||| Sbjct 6742 TTTTGTCTTCCATACTCTTCAACGAATGTCAACAATACCATTCTTGCATGTTCATCTAAT 6683 Query 1639 CCTGGTCTGATAGTTGCTCCTTCGACATCGTAAGCTCKAGCTCTTGACCCGGTTAATGAA 1698 || |||| ||||| | | ||| | ||| | ||||||| || ||||||||| Sbjct 6682 CCAGGTCG--TAGTT----CGGTGCCATTGAAAGTTTAGGCTCTTGCACCAGTTAATGAA 6629 Query 1699 CAGATGGTCAATGCACTCTTAGTGAAAATTTCGACCAATAACAATCGAGCCAATGATTTG 1758 || | ||||| | ||| |||||||||||| |||||||| ||| || |||| ||| Sbjct 6628 CATACACACAATGTATTCTCAGTGAAAATTTCCGTCAATAACATTCGTGCTAATGTTTTA 6569 Query 1759 CAATCTTTTGACAATCTCTTGCAATTAC-TAAGCTTTATGGCATTGATGTAGACATTGGT 1817 |||||| | | | | ||| |||| | || ||||| |||| ||||| ||| | Sbjct 6568 CAATCTCTCGCCTTACGCTT-AAATTGCGCAAATTTTATAGCATCAATGTACACACGACT 6510 Query 1818 ATGGGGCATGAGTTCTACAAGTCC---CGGAGCCATTTGACGATGCTTTAAGGTCCATCT 1874 | ||||| | ||| |||| ||| || ||| | || ||||||| || |||||||| Sbjct 6509 TCGAGGCATAACTTCGACAATTCCCGTCGAAGCTACTT---GATGCTTCAAAGTCCATCT 6453 Query 1875 TGAGTCATTTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTTT-GAGAACGTTTTT 1933 || || ||| || |||||| || | |||||||| | ||||| | | | ||||| Sbjct 6452 TGTGTTTTTTGGATTGTATTCCGGCAGCAAAACAAACGAGCACTTTTGGCTACCCTTTTT 6393 Query 1934 TCTT 1937 |||| Sbjct 6392 TCTT 6389 Score = 122 bits (134), Expect = 3e-24 Identities = 272/405 (67%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 1582 TCACGGCCGTACTCTTCAACATATGTGAGCAACACTGTTCTTGCAGTTTCATCTAATCCT 1641 ||||| || ||||||||||| || || | ||||| ||||||||| || |||||||| Sbjct 16644 TCACGTCCATACTCTTCAACGTAAGTCAATAACACAGTTCTTGCATGCTCGTCTAATCCG 16585 Query 1642 GGTCTGATAGTTGCTCCTTCGACATCGTAAGCTCKAGCTCTTGACCCGGTTAATGAACAG 1701 ||||| ||| | | | ||| || | |||| ||| | | || |||||||| || Sbjct 16584 GGTCTTATATTAGTGACGTCGGCAATGAAAGCGTTGGCTTTCGCACCCGTTAATGAGCAT 16525 Query 1702 ATGGTCAATGCACTCTTAG-TGAAAATTTCGACCAATAACAATCGAGCCAATGATTTGCA 1760 | |||| || | | || |||||||| | |||||||| ||| || |||| ||| Sbjct 16524 ACACTCAAAGCGCGCCGAGAAAAAAATTTCCATCAATAACATTCGTGCGAATGTTTTATG 16465 Query 1761 ATCTTTTGACAATCTCTTGCAATTACTAAGCTTTATGGCATTGATGTAGACATTGGTATG 1820 |||| |||||| ||| || ||||| | | || || ||| | ||| | || Sbjct 16464 ATCTCTTGACATTCTTTTACAATTTGCGAATTGAATAGCGCCAATGAACACACGACTTTG 16405 Query 1821 GGGCATGAGTTCTACAAGTCC---CGGAGCCATTTGACGATGCTTTAAGGTCCATCTTGA 1877 ||||| | ||| | || ||| || || ||| |||| || || ||||||||||| Sbjct 16404 AGGCATAACTTCGATAATTCCTGGCGATGCTCTTT---GATGTTTCAATGTCCATCTTGA 16348 Query 1878 GTCATTTTCATCGTATTCTGGAGGTAAAACAAATTTTCGCTTTTGAGAACGTTTTTTCTT 1937 || ||| || |||||| || || ||||| || | | || || ||||||| Sbjct 16347 GTTTTTTGGATTGTATTCCGGTGGCAAAACGAACGAATGTCTCTGGCCTCGCTTTTTCTC 16288 Query 1938 AGGAACTTCATCAGT---CTCATTATCACTATGGTCATTGCATTC 1979 ||| |||||||| | ||||||||| |||| | || ||||| Sbjct 16287 CGGAGCTTCATCATTTTCATCATTATCATTATGATTAT--CATTC 16245 Lambda K H 0.635 0.408 0.914 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19986585241472