Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_007031.1 Length=7228 Score E Sequences producing significant alignments: (Bits) Value seq156906 273 1e-69 seq190624 120 1e-23 SEQ43882 86.0 3e-13 SEQ43881 78.8 4e-11 >seq156906 Length=48909 Score = 273 bits (302), Expect = 1e-69 Identities = 305/404 (75%), Gaps = 3/404 (1%) Strand=Plus/Minus Query 865 ACATGTGGTCACTGCAAGATTCTATCTTCACTTGTGAACGAAATCATGAAGGTGAGAACA 924 |||||||| ||| |||| | | | || ||||||||| ||||||||||| ||||||| | Sbjct 20167 ACATGTGGCCACCAAAAGAATTTGTTTTTACTTGTGAAAGAAATCATGAATGTGAGAATA 20108 Query 925 TAATTCACTATCTTTGCCGCAATGGAGGAGTCATTGATTTGCT-GACTTTCCGAAATGCT 983 | ||||||||| || | ||||||||||| |||||| |||| | |||| ||| |||| Sbjct 20107 TTCTTCACTATCGCTGTCATAATGGAGGAGTTATTGATCTGCTAGCCTTTAAGAA-TGCT 20049 Query 984 ATTAATGATGAAAATAGGTATCTGCTGTCGGAATACAATCGTGATGGAAAACRGTGTATG 1043 ||| ||||||||||| || |||||||||||||||||||||| || |||| | | | Sbjct 20048 ATTGTTGATGAAAATATATACTTGCTGTCGGAATACAATCGTGAAGGTAAACAATATGTT 19989 Query 1044 CATATTGTCGTAAGCCAGGATAAAGTTGATCCCATAAATAAACTCATGCTTTTGATGAAG 1103 || || || || |||||||||||||||||||| || ||| ||||| |||| ||||||| Sbjct 19988 CACATAGTTGTGAGCCAGGATAAAGTTGATCCTATTCATACACTCAAGCTTCTGATGAAC 19929 Query 1104 TGGGGCGCGGATATCAATAGTAAGGATCAAAAAGATGGCAATACGGTTCTTCATATTGCA 1163 ||||||| |||| | ||||| || || |||| | || ||| || |||||||| Sbjct 19928 TGGGGCGTGGATTTAAATAGCAAAGA-AAAAATTACGGTGATATGGCATCACATATTGCG 19870 Query 1164 GTGCTTACAAACAACTACGAAGTGGCTAAATGGCTGTGCCAGCAGCCGGGAGTTGACATG 1223 || | ||| || || |||| ||| ||||| ||||||||||||| | ||| || ||| Sbjct 19869 GTATGTGAAAATAATTATAAAGTTGCTGAATGGTTGTGCCAGCAGCCTGAAGTGGATATG 19810 Query 1224 GAGATTATCAACTTTGCTCGTAAGACTCCGTATCAGATTGCCTG 1267 ||| || | | || || | | |||| |||||| |||| ||| Sbjct 19809 GAGGCTAAAGATTGTGATCATCAAACTCTGTATCACATTGTCTG 19766 Score = 174 bits (192), Expect = 7e-40 Identities = 255/358 (71%), Gaps = 6/358 (2%) Strand=Plus/Minus Query 171 ACATCTGCTGCATAAATACGACCATCGTGGGAGACAGTGTATTCACATGGTGGCATTGTA 230 |||| || | ||||||||||| |||| ||| |||| ||||||| || |||| ||| | Sbjct 20801 ACATTTGTTACATAAATACGATCATCATGGACGACAAGGTATTCATATAGTGGTGTTGGA 20742 Query 231 CGACAGAAAAAATGCTATTATGAAAATAGAAATACTTGTAAACATGGGTGCAGACATTAA 290 || | | |||||||||| |||||| | | || || || |||| || | || || Sbjct 20741 TGATA---AGAATGCTATTAAGAAAATCGGTTTGCTGGTGAAGCTGGGAGCTGGAATCAA 20685 Query 291 TGCAAGGGAACGAAATACTGGTAATTCATTACTTCATATTGCTGTGAAGACAAAAAATTA 350 || | ||| || |||||||||||| |||||||||||| |||||| | ||||||||| Sbjct 20684 CACATGTGAATTGAAAACTGGTAATTCAGTACTTCATATTGTTGTGAACAGAAAAAATTA 20625 Query 351 CGAATTGGCTGAGTGGCTGTGCCGAGAGCCAACCGTTAATCTAGGAGCTATTAATTATGA 410 | |||||||||||||| | |||||||||| | |||| ||| || |||||| Sbjct 20624 CTAATTGGCTGAGTGGATATGCCGAGAGCTTGGTGATAATGGCCAAGCAATCAATTATAT 20565 Query 411 GCATCATACTGCTTACCACATGGCCTACTACCTTCATGATGAGAAGATGAAGGAGCTTTT 470 ||| || || |||||| | || |||| | | ||||| | ||||| | || |||| Sbjct 20564 GCACCAGACACATTACCATCTTGCTTACTGAGCTAAAGATGAAATGATGATGAAGATTTT 20505 Query 471 GATAACCAACAGAGCTGTCTGTGACAATCCTGAAGGCATCAAAATGTCTGAAGATGAT 528 || ||| ||| ||| ||||| |||||| | || || | |||||| |||||| Sbjct 20504 GAAAACTGGTGGAGTTGTTTGTGATGATCCTG--TGGATGAAGA-GTCTGATGATGAT 20450 Score = 107 bits (118), Expect = 9e-20 Identities = 157/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 5433 TTAAAGTACTTACTCTTGAGATACTTTCTCGAAAATGTAATAAAATCCAGTAGTA-TCAG 5491 || |||||||||||||| || ||||| | ||||| ||||| || ||||| | | ||| Sbjct 22784 TTCAAGTACTTACTCTTTCGACACTTTTTGAAAAATATAATAGAAACCAGTTGGACTCAC 22725 Query 5492 TGCGACGAGTTAATCTGGTTGGTACATCGTTTATCTGTAGAATGGGACTCACATAGTTAA 5551 |||| |||| | || || || |||||||||| ||| |||||| || || | Sbjct 22724 A-CGACTGATTAAACGTGTATATATATTATTTATCTGTACAATAGGACTCGTGTAATTTA 22666 Query 5552 AATGTTCAATTATTCTCTCTGTTAAGGCCAGCAATAATAT-TTCTATGCGAAAAGGCCAT 5610 | | | | |||||| |||||| ||||| || ||| | ||| ||||| || |||||| Sbjct 22665 ACTCTCCGATTATTTTCTCTGCTAAGGTCAACAAGA-TATGTTCTACACGTGCTGGCCAT 22607 Query 5611 TCATTGGGTACCCAAACGAAGGTGCCCAATTTTTCGT 5647 ||||||||||| | | | || ||||||||||||| Sbjct 22606 TCATTGGGTACTAATATAAGTGTACCCAATTTTTCGT 22570 >seq190624 Length=45313 Score = 120 bits (132), Expect = 1e-23 Identities = 140/188 (74%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 187 TACGACCATCGTGGGAGACAGTGTATTCACATGGTGGCATTGTACGACAGAAAAAATGCT 246 ||||||| || ||| |||||| || ||||| || || || | || | |||||| || Sbjct 24122 TACGACCGTCATGGTCAACAGTGCATCCACATCGTTGCGATGCATGATA-AAAAAACACT 24180 Query 247 ATTATGAAAATAGAAATACTTGTAAACATGGGTGCAGACATTAATGCAAGGGAACGAAAT 306 |||||||||||||||| ||||| | | || || |||| ||||| ||||||| | Sbjct 24181 GTTATGAAAATAGAAATCCTTGTGCAGAATGGCGCCAACATGAATGCCAGGGAACTCAGG 24240 Query 307 ACTGGTAATTCATTACTTCATATTGCTGTGAAGACAAAAAATTACGAATTGGCTGAGTGG 366 || || || | ||||| ||||| || | || ||| |||||||| |||| ||||||||| Sbjct 24241 ACCGGCAACACCTTACTCCATATAGCGGCGAGGACTCAAAATTACCAATTAGCTGAGTGG 24300 Query 367 CTGTGCCG 374 ||||| || Sbjct 24301 CTGTGTCG 24308 >SEQ43882 Length=4490 Score = 86.0 bits (94), Expect = 3e-13 Identities = 178/264 (67%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 109 ATTTGCCGTAAGGGTAACGTTTATGAGCTAATGGAATTGGCACCATTCATTAGCGTTGAT 168 ||||||||| ||| || | || | | ||||| || ||||| || || ||| | || Sbjct 1659 ATTTGCCGTTCGGGAAATATCTACGCATTGATGGAGTTAGCACCGTTAGTTGGCGATAAT 1718 Query 169 GGACATCTGCTGCATAAATACGACCATCGTGGGAGACAGTGTATTCACATGGTGGCATTG 228 || |||||| | | |||| ||| |||| || |||| || | ||||| || || | Sbjct 1719 CAACGTCTGCTACGTGAATATGACTATCGAGGAAGACTATGCACTCACAACGTAATATGG 1778 Query 229 TACGACAGAAAAAATGCTATTATGAAAATAGAAATACTTGTAAACATG-GGTGCAGACAT 287 || ||| |||| ||| | ||||| |||||| | ||| | || | ||||| ||| Sbjct 1779 TATGACCAGAAAAGTGCGCTAATGAAGATAGAAGTGCTTTTGAATGCGAGGTGCGGACGC 1838 Query 288 TAATGCAAGGGAACGAAATACTGGTAATTCATTACTTCATATTGCTGTGAAGACAAAAAA 347 ||||||||||| || || ||| | || || || || ||||| | | ||| || Sbjct 1839 CAATGCAAGGGAGTCTGTGACCGGCAATACCTTGCTCCACATCGCTGTTATCAAAAATAA 1898 Query 348 TTACGAATTGGCTGAGTGGCTGTG 371 |||| | || ||||||||||| Sbjct 1899 TTACCAGCCAGCGGAGTGGCTGTG 1922 >SEQ43881 Length=4967 Score = 78.8 bits (86), Expect = 4e-11 Identities = 135/197 (69%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 912 GAAGGTGAGAACATAATTCACTATCTTTGCCGCAATGGAGGAGTCATTGATTTGCTGACT 971 || ||||| || || |||| || |||| |||||||||||| |||| ||| || | Sbjct 4769 GATGGTGAAAATATTCTTCATTAGTTTTGTCGCAATGGAGGAATCATCGATATGGTAGTC 4828 Query 972 TTCCGAAATGCTATTAATGATGAAAATAGGTATCTGCTGTCGGAATACAATCGTGATGGA 1031 ||| ||| |||| ||||| || |||||| || |||||||| || | ||| Sbjct 4829 TTCAAAAACCCTATCGTAGATGAGAACCAGTATCTAGTGAGTGAATACAACCGCCAGGGA 4888 Query 1032 AAACRGTGTATGCATATTGTCGTAAGCCAGGATAAAGTTGATCCCATAAATAAACTCATG 1091 |||| ||| |||||||||| | | | ||| | ||| ||||||| ||||| | Sbjct 4889 AAACAGTGCGTGCATATTGTTGCGATGGATGATTATACTGACCCCATAAGGAAACTTGAG 4948 Query 1092 CTTTTGATGAAGTGGGG 1108 | ||| ||| | ||||| Sbjct 4949 CGTTTAATGGAATGGGG 4965 Lambda K H 0.634 0.408 0.913 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22921945631744