Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_008201.1 Length=34525 Score E Sequences producing significant alignments: (Bits) Value seq124960 154 3e-33 seq341450 96.9 8e-16 >seq124960 Length=3535 Score = 154 bits (170), Expect = 3e-33 Identities = 340/500 (68%), Gaps = 10/500 (2%) Strand=Plus/Plus Query 485 CCACTGATTAAACTCTTTCAATCGCTCTTGCAATGGC-TCAATCTCGGTGATAAAAAACA 543 ||||||||| | ||||||| || |||||||| |||| ||||| || | | ||| | Sbjct 2689 CCACTGATTGATTTCTTTCATTCTCTCTTGCAGTGGCATCAAT-TCATTCCGCACAAAAA 2747 Query 544 CCTCGGCAGCATCAGCCACGTTGCCAAAACCGCCGGTGTTATTTGGGATAATCCCCATCA 603 ||| ||| | | || | ||||| || ||||| || || || || |||||||||| Sbjct 2748 CCTGACTAGCCTTCTCTACATCCCCAAATCCCCCGGTATTGTTCGGAATTATCCCCATCA 2807 Query 604 GTTGTGGTGGCACACGGTGAGCAGCTAACACATCATCACGGCTCACGTTCTTGATATTAA 663 || |||||||| ||||| ||| || || ||| || | | | ||||||||||| | Sbjct 2808 TCTGCGGTGGCACGCGGTGTGCACTTAGCAAATCGTCTCTAGTAGCATTCTTGATATTGA 2867 Query 664 AAAACTCATCTTTTGCCGACACATCAGCAATCGGAATAATCTGTATTCCATCTTTCTTGC 723 | || |||||||| | | || || | || | ||| | ||| |||||| || | Sbjct 2868 AGAAATCATCTTTGGTAGCGACTTCGCTCAGTGGCAAAATTTTTATGCCATCTGGTTTAC 2927 Query 724 CGTTTGGTGCGTGGACGAACAAGTTTTTAAAATTCCCCACCCCTTT--TGACT-GCTTGA 780 |||| ||||||| | || || || || || || | ||||| || || || | | Sbjct 2928 CGTTCGGTGCGTACATAAATAAATTGCGGAAGTTGCCTAGTCCTTTAGTGTCTCGCAT-A 2986 Query 781 GCTGCTGGCGAATATTTTCAACATCTTCTTGT-TTTTGTGACGCATCGCTCATATAAAAC 839 || |||||| || | || || || || || | || | ||| ||| ||||||| || Sbjct 2987 GC--CTGGCGCATCCTGTCGACGTC-GCTGGTGCTCTGCGCCGCGTCGGTCATATACAAA 3043 Query 840 ACAAAGCCGGCGTGAGCTCCATTTAAAAAATACTTACGGCGAAACAGAGTAGCACTCTCA 899 | | || || || || || ||| | ||||||| ||||| ||||| || ||| ||| Sbjct 3044 ATGTAACCCGCATGTGCGCCGTTTTGATAATACTTGCGGCGGAACAGCGTCGCAGCTTCA 3103 Query 900 TTTAACCACGCAGATTGCAGGGCCGAAAGATATTGTGGCAAGCCGTAAATATCTTGATTA 959 || | ||| ||||| | || || ||||| | |||| |||||| | ||||| ||| Sbjct 3104 TTCAGCCAGGCAGAATTCAATGCACTGAGATACTCCGGCAGGCCGTACAGTTCTTGGTTA 3163 Query 960 ATATCAGGCTCAAGCAAGTG 979 ||||| || |||| || ||| Sbjct 3164 ATATCTGGTTCAATCAGGTG 3183 >seq341450 Length=2593 Score = 96.9 bits (106), Expect = 8e-16 Identities = 174/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 4873 GAGTATGCCAATCTTGACGCACTCGTAATGGACGCCACCGAAGAACTTATTGATGAATGG 4932 || || ||||| || ||||| || || ||||| |||||| | || |||| ||| Sbjct 265 GATTACGCCAACCTCGACGCGCTGGTGATGGATGCCACCAATACCCTGATTGCACCGTGG 324 Query 4933 CATCGTGATGACACCGATTTAGTGGTGATTACCGGTCGCAAGTTGCTTGCGGATAAATAT 4992 ||| || ||| | || | |||||||| ||||||| | |||| || || || ||| Sbjct 325 TATCAGGAAGACCCGGAACTGGTGGTGATCTGCGGTCGCCAACTGCTGGCCGACAAGTAT 384 Query 4993 TTCCCGATTGTGAATCAGCAAAACGCACCA-ACCGAAGAACTTGCCGCTGATATTGTGAT 5051 |||||| | || |||||| || | || | | ||||||| | ||||| ||| | | || Sbjct 385 TTCCCGCTGGTCAATCAGGAACA-GCCCAACACCGAAGCGATGGCCGCCGATCTGATTAT 443 Query 5052 CTCACAAAAACGCATTGGGGGCTTAAAAGCGGTGCGTGTGCCGTTCTTCCCGGCGAATGC 5111 | || || ||||| || | || ||||||||||||| ||||||||| |||| Sbjct 444 CAGCCAGAAGCGCATCGGCAATCTGCCCGCCGTGCGTGTGCCGTACTTCCCGGCAGATGC 503 Query 5112 GATTTTAATCAC 5123 | | || ||||| Sbjct 504 GCTGTTGATCAC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109890434033472