Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value SEQ30190 114 2e-20 seq356527 105 8e-18 seq315787 84.2 3e-11 seq112643 82.4 1e-10 >SEQ30190 Length=43192 Score = 114 bits (126), Expect = 2e-20 Identities = 142/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| | ||||||||| || ||||| || || || ||||| || Sbjct 6916 AAAGTGAGACCTGGCATAATGCCACGCTTCTTGAGCCAGAAGATAGAAGCAAAGCTGCCG 6857 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 |||||||| || || || ||||| ||||| |||| | || ||| ||| | ||| | Sbjct 6856 GAAAAGAAGATGCCCTCCACTGCTGCAAATGCAACTATTCGCTCACCAAACGTGGCAGTC 6797 Query 32832 TCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 ||||| ||||||| | ||||| || |||||||| || ||||| ||||||||||| Sbjct 6796 TCATGGGAAATCCACTGCAGTGCCCAGTCTGCCTTCTTCTTCACACATGGCATTGTCTCC 6737 Query 32889 ATAGCATTAAAGAG 32902 | ||||| || || Sbjct 6736 ACCGCATTGAACAG 6723 >seq356527 Length=1012 Score = 105 bits (116), Expect = 8e-18 Identities = 286/438 (65%), Gaps = 0/438 (0%) Strand=Plus/Minus Query 62994 CGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACC 63053 |||||||||| || | || | | ||||| || || || | ||| ||||||| | || Sbjct 443 CGAACTCGTCGCCGTAGACGTCGGAGAGTCCCGGGCACTCGTGCGGGCACATCAGGGTCC 384 Query 63054 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63113 || | |||| |||||||| || ||||| ||||| || || |||| || || | || | Sbjct 383 ACACGCCGTTCTCCTTCACGCGCTTCATGAAGAGGTCCGGGGTCCAGAGGGCGACGAAGA 324 Query 63114 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63173 | || | || | ||||| || || ||||| | |||| ||| | | | Sbjct 323 GGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGGACGTCGATGAAGTCAAAGA 264 Query 63174 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63233 || | ||||| || |||| ||| | || || | || || || ||||| || |||| Sbjct 263 CGTCGTAGTGCCAGGGCTCCAGGTACACCGCGATGGCGCCCGGGCGCTTGTTGCCGCCCT 204 Query 63234 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 63293 | || | ||| | |||||||| || | || | || ||| || | || || ||||| | Sbjct 203 GGTCGACGTAGCGCGCGGTGTTGTTGAAGACGCGCATCATCGGCAGGATCCCGTTGGAGG 144 Query 63294 TACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTA 63353 | || |||||||| | ||| ||| || | || || || || || || || | Sbjct 143 TGCCGTTGGTCCCCGCGATGTAGGAGCCGGTCGCCCGGATGTTGTGGATGTTGAGCCCGA 84 Query 63354 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 63413 | || || ||| || ||||| | ||||| || | ||| || ||||||||||| | Sbjct 83 TGCCGCCGGCCGACTTGGAGATCAGCGCGCAGGTCTTCAGCGTGTCGTAGATGCCCTCGA 24 Query 63414 TACTATCATCCATCATGT 63431 | || ||| |||||| Sbjct 23 TGGAGTCCTCCTTCATGT 6 >seq315787 Length=5980 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 32918 ACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 32977 |||||| || || || || || || | || || ||||| || || || || || || || Sbjct 1382 ACTATCCTTGACGTAAGTGTCGATGAGCAGGCTGTACATCTCTGAGTGTATATTCTCGAT 1441 Query 32978 GGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCG 33037 || || || || ||||||||||| | |||||| || | ||| || || | ||||| Sbjct 1442 AGCAATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGTTACCTGCACCTCCTGGCTGAATCG 1501 Query 33038 TTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTT 33097 || | || ||||||||||| || || || ||||| || || |||| || || || Sbjct 1502 CTCCACCAAGTTTTCATTCACAATGCCATCTGATGCTGCGAAGAATGCCAGCACGTGCTT 1561 Query 33098 TATAAA 33103 ||||| Sbjct 1562 GATAAA 1567 >seq112643 Length=20659 Score = 82.4 bits (90), Expect = 1e-10 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 ||||||||||| || || || || |||||||| || | ||| || || || ||| | Sbjct 6511 ATCTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTGGACTTGCGG 6570 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 || ||||||||||| ||||| ||| | || || || || || | ||| || ||||| || Sbjct 6571 TTGCACGCATCCTTGTAAAGCATGTAGGGGGTGCCCGTCTCCACCTGCGACTCTATGATG 6630 Query 62921 GCTTTCCAGA 62930 || | ||||| Sbjct 6631 GCGTACCAGA 6640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 630803720204800