Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value SEQ22875 159 2e-34 seq126606 91.5 1e-13 >SEQ22875 Length=3501 Score = 159 bits (176), Expect = 2e-34 Identities = 289/418 (69%), Gaps = 11/418 (3%) Strand=Plus/Minus Query 84456 CCTTTATACGGTTCGTTCCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCAC 84515 || || || || || | ||| |||| |||||||| || | ||||| | ||||| || Sbjct 3501 CCCTTGTAGGGGTCATCCCAGGCGGTGACGCCCTTCTGCGCTTTTTGCAGCGCGGCGAAC 3442 Query 84516 GGATCGTGGATGGCAATTTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCG 84575 ||||||||||||| | ||| |||||| | || ||| ||| || || ||||| | | | Sbjct 3441 GGATCGTGGATGGAGACTTTGAAATCCTCGCGGCCCTGGCAGGAGCGCTGCAGCGCCTGG 3382 Query 84576 AAACTACCGGGTATCACTTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGGTATG 84635 || || || ||| |||| || ||||| || || || |||||||| || || || Sbjct 3381 AAGCTGCCTTCAATCTCTTTCAGGCTGTCGTTGATGCCGTTGCCGCCGCAGATCGGGATA 3322 Query 84636 AAACCGTACAACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGC 84695 || ||||||| || ||| | | || || || | ||||| |||| ||||||||| Sbjct 3321 AAGCCGTACAGCAGGTGAGTCAGGTTCTGCGCCGGGATCTTGTCGACGGTGAAATTGCGC 3262 Query 84696 CCGTACACTCCCCATTCAACAAAATACGCAGCAACCGTTTTATCG----TCTCTTCTGCC 84751 ||||| || ||||| || || ||||| | | | ||| ||| || ||| || | Sbjct 3261 CCGTAAACGCCCCACTCGACGAAATAAGAACCGACCACTTTGCCGGAATTCTGTT-TATA 3203 Query 84752 CGGTTTGTTGTTTTCCCGCCATGTATATTCCAGCGGAGCCAAATGACCGCCGTCGGTGTC 84811 |||||| || |||||| || | | || || ||| |||||||| | |||||||||||| Sbjct 3202 CGGTTTATTCTTTTCCAGCAGCGGCTCTTTCAACGGCGCCAAATGGCTGCCGTCGGTGTC 3143 Query 84812 TGCCACTTTGACCA--ACA-CGGAATCGCTCACGGAACAGCCGTCCTCATTGCACAAT 84866 | ||| || | || || ||||| ||| |||||||| ||||||||||| Sbjct 3142 GGACAC---CACAATTTCAGTGGCGTCGCTGGCGGTGCAGCCGTCGGCATTGCACAAT 3088 >seq126606 Length=1303 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||||| ||||| |||||||||||||| |||||| ||| || | ||||| Sbjct 1302 CAGCAGAGACTGATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACTTTGTCAGATTAT 1243 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAAT 22068 || || ||||| ||||| ||||| ||| |||| |||| ||| | ||||| | ||||| Sbjct 1242 AACATCCAGAAAGAATCCACTCTGCATTTGGTCCTACGCTTAAGGGGAGGTTGTTAAT 1185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356566237289152