Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_008947.1 Length=2755 Score E Sequences producing significant alignments: (Bits) Value seq153422 176 8e-41 seq170462 170 3e-39 seq223503 159 6e-36 SEQ29241 156 7e-35 seq133456 118 2e-23 >seq153422 Length=21447 Score = 176 bits (194), Expect = 8e-41 Identities = 308/440 (70%), Gaps = 14/440 (3%) Strand=Plus/Plus Query 2193 ACTCTCGACAAAATCACCATGTGGGGAAACAATAGCGGAAATTCTGGAGAAGCCGCACGT 2252 || ||| ||| | ||| |||||| || |||| ||| |||| || | ||| || | | Sbjct 2682 ACCCTCAACACATTCAAGATGTGGCAGAAGAATACTGGAGATTCCGGTGCAGCAGCTCCT 2741 Query 2253 CGGGACGCCGAGGAAAGACGTCGCAAAGAGCAAAAGTGCG---CAGAAGAGGAAGAGAGG 2309 || |||||||||||| | || | || |||||| | || ||||||| ||||||||| Sbjct 2742 CGAGACGCCGAGGAACGTCGCCAAAAGGAGCAAGACCGCTTAACAGAAGAAGAAGAGAGG 2801 Query 2310 CGCATACAAGACAGGGAGCGCGAGCAGAGGAAGCGTCAGCGAGAAGAACAGCGGCGCAAT 2369 | | | |||||| |||||| || | |||||||| || | | |||| ||||||| Sbjct 2802 CAGAGATAAGACAAGGAGCGAGAAGACAGGAAGCGGCAACAAAAAGAGCAGCGGCAACTC 2861 Query 2370 GAGGAGCGCCTGGTGCAGTATGCAATAGCTTTGCAAAAGCAGGCATCGTGGCG--CGGAA 2427 || ||| | || ||||||||||| |||| || |||||||| | |||| | || Sbjct 2862 GAACAGCACTTGATGCAGTATGCACTAGCGCTGTGTCAGCAGGCAGAGGGGCGTACACAA 2921 Query 2428 C-ACTTAACCGACCATGATGCATC-CTAGTCGTATGTA--AAAATCTGTAAAAGTATTCG 2483 | | | ||| ||||| ||| ||| || ||| || | || ||| || ||||| Sbjct 2922 CAAAATTGGCGAAAGTGATG-ATCTCTATTCTTATATATCATGATTTGTTAATGTATTAC 2980 Query 2484 ATCTCaaaaataaaaaaCTTGTTCCTAGCTCATACATATTTATTTTATTTCAAAGTGCAT 2543 || || ||||||| ||||| | || | || |||||| |||| |||||||||||||| Sbjct 2981 ATATCTAAAATAACAAACTCGAACCACG---ATTCATATTCATTTCATTTCAAAGTGCAT 3037 Query 2544 GTTAGCTTAGCAACGACTGCCAAGCTTGCGTGTACCTTCTTACAAATGTCACGACACACC 2603 ||||||||| | | | | ||||| |||||| || |||||| |||||| ||||| Sbjct 3038 AATAGCTTAGCGATTAATTCTGAGCTTATGTGTACTTTTCTACAAACATCACGAAACACC 3097 Query 2604 GGTTTCT-TTCACAATACTA 2622 |||| | | || |||||| Sbjct 3098 TGTTTTTCTACATGATACTA 3117 Score = 163 bits (180), Expect = 5e-37 Identities = 195/261 (75%), Gaps = 13/261 (5%) Strand=Plus/Plus Query 1026 TGTTGAAAAAATAACTTGGATTCTAGCACTAGTGGGTCTTGTATGAATGCCCGCTATGAA 1085 ||||||||||||||| | ||||||||| |||||| | |||| || ||||||||||| | Sbjct 6864 TGTTGAAAAAATAACATTTATTCTAGCAGTAGTGGCTGTTGT--GAGTGCCCGCTATGGA 6921 Query 1086 TGCTGCGCCGTAGTCCAGCGTCATGCTCACATAATGCAAACGCAGATAAAGCGCTGTATA 1145 ||||| || | |||| ||||| ||| | |||| ||||||| | | |||| | || | Sbjct 6922 TGCTGTGCTGCAGTCAAGCGTTATGATTACATTATGCAAAAGTGGC-AAAGTGGCGTGT- 6979 Query 1146 TGGCCTACGAGATGCGGGTGACCGCTGCATGTCAACGATAAGCAGATGATTCTACAAGAA 1205 | ||||||| | | |||||||||| | || | |||| || |||| | || |||||| Sbjct 6980 -GCCCTACGAAACGTGGGTGACCGCAGGATTTGAACGG--AGGAGATAAATCGGCAAGAA 7036 Query 1206 GTATGTTTGCTCTAACCGTTTCAAATGTCATTCTCTTTCTGTGAGAACGTGAGCTGTAGG 1265 ||||||||| || | | || | | | || |||||||| |||||||||||||| Sbjct 7037 GTATGTTTGTTCGAGGCATTC------TTACTTTCGTTCTGTGAAAACGTGAGCTGTAGT 7090 Query 1266 TTTCTGATCATTCGGTCCCAG 1286 ||||||| ||||| | ||||| Sbjct 7091 TTTCTGAACATTCAGCCCCAG 7111 Score = 93.3 bits (102), Expect = 7e-16 Identities = 69/80 (86%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 537 CATAATAGGAATGCTGGACACTCATCGTGAAAAACAGTTCAAAAGTTTGTACATTCAGTA 596 |||||||| | ||||||||||||||||| ||| ||||| | ||||||||||||| || Sbjct 6712 CATAATAGTACTGCTGGACACTCATCGTTAAAGCCAGTTAAGAAGTTTGTACATTTAG-- 6769 Query 597 TACAGGTAAAACATATCTAT 616 ||||||||||| |||||||| Sbjct 6770 TACAGGTAAAAAATATCTAT 6789 >seq170462 Length=77886 Score = 170 bits (188), Expect = 3e-39 Identities = 198/263 (75%), Gaps = 13/263 (5%) Strand=Plus/Plus Query 1026 TGTTGAAAAAATAACTTGGATTCTAGCACTAGTGGGTCTTGTATGAATGCCCGCTATGAA 1085 ||||||||||||||||| |||| |||| |||||| | |||| | || ||| |||| | Sbjct 34264 TGTTGAAAAAATAACTTTTATTCCAGCAGTAGTGGCTGTTGTGAGTAT--CCGATATGGA 34321 Query 1086 TGCTGCGCCGTAGTCCAGCGTCATGCTCACATAATGCAAACGCAGATAAAGCGCTGTATA 1145 | ||| || | |||| ||||| ||||| |||| ||||||| | | ||||| | ||||| Sbjct 34322 TTCTGTGCTGCAGTCAAGCGTTATGCTTACATTATGCAAAAGTGG-TAAAGTGGTGTAT- 34379 Query 1146 TGGCCTACGAGATGCGGGTGACCGCTGCATGTCAACGATAAGCAGATGATTCTACAAGAA 1205 | ||||||| | |||||||||| | |||| |||| || |||| | || ||||||| Sbjct 34380 -GCCCTACGAAACATGGGTGACCGCAGGATGTGAACGG--AGGAGATAAATCGACAAGAA 34436 Query 1206 GTATGTTTGCTCTAACCGTTTCAAATGTCATTCTCTTTCTGTGAGAACGTGAGCTGTAGG 1265 ||||||||| |||| | || | | | || |||||||| ||||||||||||| Sbjct 34437 GTATGTTTGTTCTAGGCATTC------TTACTTTCGTTCTGTGAAAACGTGAGCTGTAAT 34490 Query 1266 TTTCTGATCATTCGGTCCCAGCT 1288 || ||||| |||||| ||||||| Sbjct 34491 TTCCTGATAATTCGGCCCCAGCT 34513 Score = 78.8 bits (86), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 537 CATAATAGGAATGCTGGACACTCATCGTGAAAAACAGTTCAAAAGTTTGTACATTCAGTA 596 ||| |||| | |||||||||||||||| ||| ||||| | ||||||||||||| | Sbjct 34112 CATTATAGTACTGCTGGACACTCATCGATAAAGCCAGTTAAGAAGTTTGTACATTTA--T 34169 Query 597 TACAGGTAAAACATATCTAT 616 ||||||||||| |||||||| Sbjct 34170 TACAGGTAAAAAATATCTAT 34189 >seq223503 Length=34411 Score = 159 bits (176), Expect = 6e-36 Identities = 201/269 (75%), Gaps = 14/269 (5%) Strand=Plus/Minus Query 1026 TGTTGAAAAAATAACTTGGATTCTAGCACTAGTGGGTCTTGTATGAATGCCCGCTATGAA 1085 ||||||||||||||||| |||| | || |||||| |||| || |||||||| || | Sbjct 8135 TGTTGAAAAAATAACTTTTATTCCATCAGTAGTGGCCGTTGT--GAGTGCCCGCTGTGTA 8078 Query 1086 TGCTGCGCCGTAGTCCAGCGTCATGCTCACATAATGCAAACGCAGATAAAGCGCTGTATA 1145 ||||| || | |||| ||| | ||||| |||| ||||||| | | ||| | ||||| Sbjct 8077 TGCTGTGCTGCAGTCAAGCATTATGCTTACATTATGCAAAAGTGGC-AAATTGGTGTAT- 8020 Query 1146 TGGCCTACGAGATGCGGGTGACCGCTGCATGTCAACGATAAGCAGATGATTCTACAAGAA 1205 |||| |||| |||||| | ||||||| | | ||||| || |||| | || | ||||| Sbjct 8019 -GGCCGACGAAATGCGGTT-ACCGCTGGGTTTGAACGA--AGGAGATAAATCGATAAGAA 7964 Query 1206 GTATGTTTGCTCTAACCGTTTCAAATGTCATTCTCTTTCTGTGAGAACGTGAGCTGTAGG 1265 ||||||||| |||| || | | | || |||| || || |||||||||||||| Sbjct 7963 GTATGTTTGTTCTAGGCGCTCTTACTTTCGTTCTGTT-----GA-AACGTGAGCTGTAGT 7910 Query 1266 TTTCTGATCATTCGGTCCCAGCTCGGATG 1294 ||||||||||||||| ||||| | | ||| Sbjct 7909 TTTCTGATCATTCGGCCCCAGATTGTATG 7881 Score = 122 bits (134), Expect = 2e-24 Identities = 294/435 (68%), Gaps = 25/435 (6%) Strand=Plus/Minus Query 2206 TCACCATGTGGGGAAACAATAGCGGAAATTCTGGAGAAGCCGCACGTCGGGACGCCGAGG 2265 |||| |||||| || |||| || | || || | |||||| ||||| |||||||||| Sbjct 12161 TCACAATGTGGCAGAAGAATACTAGAGAATCCGGTGCAGCCGCTCGTCGTGACGCCGAGG 12102 Query 2266 AAAGACGTCGCAAAGAGCAA-AAGTGCGC--------AGAAGAGGAAGAGAGGCGCATAC 2316 || | |||| || || | ||| | | |||||| |||||||||| | || Sbjct 12101 AA---CCTCGCCAAAAGAATCAAGACCACTTAAAAGAAGAAGAAGAAGAGAGGCAGAGAC 12045 Query 2317 AAGACAGGGAGCGCGAGCAGA--GGAAGCGTCAGCGAGAAGAACAGCGGCGCAATGAGGA 2374 ||||| |||||| |||||| ||||||| || ||| |||| ||||||| || | Sbjct 12044 AAGACGAGGAGCG--AGCAGACAGGAAGCGGCAACGAAAAGAGCAGCGGCAACTCGAACA 11987 Query 2375 GCGCCTGGTGCAGTATGCAATAGCTTTGCAAAAGCAGGCATCGTGGCGCGGAACACTTAA 2434 || | || ||||||||||| |||| ||| ||||||| ||| | || || Sbjct 11986 GCACTTGTTGCAGTATGCACTAGCGCTGCGTCTGCAGGCAGACATGCGTTCACAACAAAA 11927 Query 2435 -CCGACCATG-ATGCATC-CTAGTCGTATGTA--AAAATCTGTAAAAGTATTCGATCTCa 2489 || | | | ||| ||| || ||| || | || | | || ||||| || || Sbjct 11926 TTCGTTAAAGTAGTGATCTCTATTCTTATATATTATGATTTCTTAATGTATTAAATATCT 11867 Query 2490 aaaataaaaaaCTTGTTCCTAGCTCATACATATTTATTTTATTTCAAAGTGCATGTTAGC 2549 |||||||||||| | ||| | || | |||| |||| ||||||||||||||| |||| Sbjct 11866 AAAATAAAAAACCGGAACCTCG---ATTCGTATTCATTTCATTTCAAAGTGCATGATAGC 11810 Query 2550 TTAGCAACGACTGCCAAGCTTGCGTGTACCTTCTTACAAATGTCACGACACACCGGTTTC 2609 ||||| | || | |||| | ||||| || ||| || |||||| ||| | |||| Sbjct 11809 TTAGCGATGAAATCTGAGCTGACATGTACTTTTCTACTAACATCACGAAACATCTGTTTT 11750 Query 2610 T-TTCACAATACTAT 2623 | | || ||||||| Sbjct 11749 TCTACATGATACTAT 11735 Score = 78.8 bits (86), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 537 CATAATAGGAATGCTGGACACTCATCGTGAAAAACAGTTCAAAAGTTTGTACATTCAGTA 596 |||||||| | ||||||||||||| || ||| ||||| | ||||||||||||| | Sbjct 8284 CATAATAGTACCGCTGGACACTCATTGTTAAAGCCAGTTAAGAAGTTTGTACATTTA--T 8227 Query 597 TACAGGTAAAACATATCTAT 616 ||||||||||| |||||||| Sbjct 8226 TACAGGTAAAAAATATCTAT 8207 >SEQ29241 Length=21834 Score = 156 bits (172), Expect = 7e-35 Identities = 201/271 (74%), Gaps = 15/271 (6%) Strand=Plus/Minus Query 1026 TGTTGAAAAAA-TAACTTGGATTCTAGCACTAGTGGGTCTTGTATGAATGCCCGCTATGA 1084 ||||||||||| |||||| |||| |||| |||||| | |||| ||| ||||||||| Sbjct 17472 TGTTGAAAAAAATAACTTTTATTCAAGCATTAGTGGCTGTTGTGAGAA--CCCGCTATGT 17415 Query 1085 ATGCTGCGCCGTAGTCCAGCGTCATGCTCACATAATGCAAACGCAGATAAAGCGCTGTAT 1144 |||||| || | |||| |||| | ||| |||| | ||||| | | ||||| | ||||| Sbjct 17414 ATGCTGTGCTGCAGTCATGCGTTACGCTTACATTACGCAAAA-CTGGTAAAGTGGTGTAT 17356 Query 1145 ATGGCCTACGAGATGCGGGTGACCGCTGCATGTCAACGATAAGCAGATGATTCTACAAGA 1204 |||| |||| | ||| || || |||| | | |||| || || | | || |||||| Sbjct 17355 --GGCCGACGAAACGCGAGTTACTGCTGGGTTTGAACGG--AGGAGGTAAATCGACAAGA 17300 Query 1205 AGTATGTTTGCTCTAACCGTTTCAAATGTCATTCTCTTTCTGTG-AGAACGTGAGCTGTA 1263 |||||||| | |||| | || | | | || ||||||| | ||||||||||||| Sbjct 17299 AGTATGTTGGTTCTAGGCATTC------TTACTTTCGTTCTGTGTAAAACGTGAGCTGTA 17246 Query 1264 GGTTTCTGATCATTCGGTCCCAGCTCGGATG 1294 | ||||||||||||||| ||||||| | ||| Sbjct 17245 GTTTTCTGATCATTCGGCCCCAGCTTGTATG 17215 >seq133456 Length=17300 Score = 118 bits (130), Expect = 2e-23 Identities = 145/192 (76%), Gaps = 7/192 (4%) Strand=Plus/Plus Query 1026 TGTTGAAAAAATAACTTGGATTCTAGCACTAGTGGGTCTTGTATGAATGCCCGCTATGAA 1085 ||||||||||||||| | |||| | | |||||| | || |||| | | |||||| | Sbjct 13630 TGTTGAAAAAATAACATTTATTCCCGTAGTAGTGGCTGTT--ATGACTACGTGCTATGTA 13687 Query 1086 TGCTGCGCCGTAGTCCAGCGTCATGCTCACATAATGCAAACGCAGATAAAGCGCTGTATA 1145 |||| || | |||| |||||||||||||||| ||||||| | | ||||| | || || Sbjct 13688 TGCTATGCTGCAGTCGAGCGTCATGCTCACATTATGCAAAAG-TGGTAAAGTG--GTGTA 13744 Query 1146 TGGCCTACGAGATGCGGGTGACCGCTGCATGTCAACGATAAGCAGATGATTCTACAAGAA 1205 || |||||| | ||| ||||||||||| | | ||| ||| |||| | || || |||| Sbjct 13745 TGACCTACGGAACGCGCACGACCGCTGCATATGACCGA-AAG-AGATAAATCGACCAGAA 13802 Query 1206 GTATGTTTGCTC 1217 ||||||||| || Sbjct 13803 GTATGTTTGTTC 13814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8674164360768