Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_008952.1 Length=4063 Score E Sequences producing significant alignments: (Bits) Value SEQ16539 336 6e-89 >SEQ16539 Length=34362 Score = 336 bits (372), Expect = 6e-89 Identities = 461/637 (72%), Gaps = 23/637 (4%) Strand=Plus/Minus Query 1052 GTACGTTGCGACGTGTTCTCTGATCGGCTCGAGGCGCTGGTGATAAGCCTGAGTAGAATA 1111 ||| |||||||| |||||||||| ||| || ||| | |||||||| || |||||||| Sbjct 16820 GTATGTTGCGACATGTTCTCTGACGGGCCGAAGCCGCCGATGATAAGCTTGGGTAGAATA 16761 Query 1112 CATGGTTTTTTCTTCAAAG--ATAGCACCGTCGCTGCATCTCGCTCTATTGTGTGACCGC 1169 |||||||||||||||| || ||||||| |||| || ||| |||||||||||||| | Sbjct 16760 CATGGTTTTTTCTTCATAGCGATAGCACAGTCGTCACACCTCATTCTATTGTGTGACCAC 16701 Query 1170 GAGCTCCATGCGGCGTTGGAGAGTCACGTGCGTCGCTGTCTCATCGGTAGCTCGATGGTG 1229 ||||||| ||| |||| | ||||| || | || || | |||| ||||||||||||| Sbjct 16700 GAGCTCCGTGCAGCGTCGAGTAGTCATATGTGCAGCGGTTTTATCGATAGCTCGATGGTG 16641 Query 1230 CGGCCGAGATACGGAGCACCTGGTTGTCGTGGACGTTAATCTTGTACGGAGTTGGAAAAA 1289 || || || |||||| ||| |||| | |||| | |||||||||| ||||| | ||| Sbjct 16640 CGTCCACGACACGGAGTCCCTAGTTGGCCTGGAAATAAATCTTGTACAGAGTTCAAGAAA 16581 Query 1290 GTTAGCATGTCAAGAGGTATGCACTTTGTACGCTTCGAGCATTGACAACATTGGGTACAA 1349 ||||||||||||| | |||||||||| || || ||| || || ||| | ||||||| Sbjct 16580 GTTAGCATGTCAAAACGTATGCACTTATTATTTTTTGAGTATGAACCACACTAGGTACAA 16521 Query 1350 ACTCTACTCCAGTTTGTAAACAAACCGCATTACAACATCTATTTCAGTATGGCATAAACT 1409 | |||| ||| || ||| ||| | || |||| ||||| |||| ||| | | Sbjct 16520 CCACTACGCCAATT--AAAAAAAAAAGTATGGTAACA--TATTTAGGTATCGCAAATATG 16465 Query 1410 TGCA----CAAATTACTTTGACGTCAGGATTTAAGGACGAGGATAAAAATAGTTGCCTAT 1465 || | | ||||| |||||||||||||||||||| | || ||| | | |||| Sbjct 16464 TGTAATGGGATATTACATTGACGTCAGGATTTAAGGAAAACAATTGCAATCGGTACCTAA 16405 Query 1466 TATTACAGTATTATTACTATTATTTCTAATGGGTGATGCAATAATATTAACCGCAATTG- 1524 ||| || |||||| | |||||||| ||||| | ||||||||||| | || |||| Sbjct 16404 CATTGCAATATTATCATCATTATTTCAAATGGTAGCCGCAATAATATTTATCG--ATTGG 16347 Query 1525 -------ACATTTTGCCATTGTTCATTACATCTAATTCAGGACTTTTGCCTAACATTTTT 1577 ||||| |||| |||| ||| | || ||||||| | |||||||| | || Sbjct 16346 GATTCTACCATTTGGCCACCGTTCGTTAATTATATTTCAGGATTATTGCCTAATTATCTT 16287 Query 1578 TCCTTA-AATTGCGTCATGGGATTTCAATCCAATTGTTCATTGTATGGCAATTGTTATCA 1636 |||| | ||||||||||| | | | ||| ||| |||||||| | || |||||| Sbjct 16286 TCCTCATAATTGCGTCATTCGGTATTAATTTCATTATTCATTGTGT-AAAACGCTTATCA 16228 Query 1637 GCTGGCTGAGTATATAACGTCTCTAAATGCCTCATGA 1673 || |||| | ||||||| ||| | | |||||||| Sbjct 16227 GCAGGCT-ACTATATAAAGTCCCCCGTTCCCTCATGA 16192 Score = 185 bits (204), Expect = 2e-43 Identities = 446/666 (67%), Gaps = 42/666 (6%) Strand=Plus/Minus Query 2106 AAAGCTTCAACGAAATTAATGTTAATTTTTCTATTTTCAGCTCACCGATCCCACGAAGTC 2165 |||||||||||||||| ||||||||||||| ||||||||| ||| |||||||| | | Sbjct 15708 AAAGCTTCAACGAAATAAATGTTAATTTTTATATTTTCAGGACACGGATCCCACCAGGAA 15649 Query 2166 CCGCTGCACAGAAGACCTACCGAAGCCAG--ACCATCACGTCG------TTAAGAAATCA 2217 |||| || || |||| ||| | | |||| || | | | |||||| Sbjct 15648 CCGCCGC-CACGAGAC------AAGACTGGAACCACCAATTGGAGCCACTGAAGAAAAAC 15596 Query 2218 GGCAGAA--TAGGGACCCGAATTGGAAATCCTGGAGGCGACGT--TGACTACA-ATGTCT 2272 | | | || ||| |||||||||||||| | || || | | ||| || ||| Sbjct 15595 GCGTGTCGTTCGGTACCAGAATTGGAAATCCTAGTAGCCCCGACCTAAATACTTATTTCT 15536 Query 2273 ACTGGGAAAT----TTAATCTTCATAATCAACCTGAGACTGTTTA-AGATGTCGGTTGTT 2327 | | || | || ||||| |||| ||| | ||||| || || | | |||||| Sbjct 15535 ATT---AATTCTTTTTTATCTTTATAAATAACTCAATACTGTCTACAGTTATGGGTTGTA 15479 Query 2328 TTTACTCTGTAAACCGTGCGGTTTATAATATTTCTTATTGTAATGCTTCTTTTTCTTCAC 2387 |||||| | ||||| | |||||||||| || |||||||||||| | | || | Sbjct 15478 TTTACTTTATAAACTGCTCGGTTTATAAGTTTGAGTATTGTAATGCTCTATGATTATCGC 15419 Query 2388 TATTTTAAATAAATATTATTATAAAATATTTCTTGGTATCATTGACGTAGAATAAGCTGA 2447 | ||| ||||||| || || ||| ||||| | ||||| || || |||| |||||||| | Sbjct 15418 TTTTTCAAATAAAAATAATAATACAATATATTTTGGTTTCGCTGGCGTAAAATAAGCTCA 15359 Query 2448 CGCGA-GACCGCGTCCAGTAGGTATCCCTTATGAACTCACTTATGAACATGGCTGAGCTT 2506 |||| | | |||||||| ||| ||| | | || || ||| || |||| Sbjct 15358 TGCGACAATAGTAAAGAGTAGGTAACCC-----AACCCGCAGGTGTACCTGGTTGCGCTT 15304 Query 2507 AAGCCACGATCGGTCCGCTAGGCTGCATGCGCATTGAATGTGCATCGGACCGACGTGCAG 2566 | | || | ||||||||||||||||| | | || ||| |||||||||| |||| ||||| Sbjct 15303 AGGTCATGTTCGGTCCGCTAGGCTGCGTACACAAGGAAAGTGCATCGGAGCGACTTGCAG 15244 Query 2567 ATGTAGGCGTCATGCTGCAACTTGTGCAAC------TGCACTCTAACGGGTCGAGCGTAA 2620 || || | || ||||||| | | || ||||||| || ||| ||||||| Sbjct 15243 ATACAGCAATTATATTGCAACTCATCCGACTGTTATTGCACTCGAATTAGTCCAGCGTAA 15184 Query 2621 CGGCCTAGCCGTTAGCATGGTTTCATGGCAGAGCTTTGTCGCCTGATTTCAAGAACACCA 2680 ||| | |||| | | || ||| | || | || ||||| ||||| | || | Sbjct 15183 CGGGCACAGCGTTGACGTCATTGCATCATGCATCTGTTTCCCCTGAATTCAAAGATACTA 15124 Query 2681 ACCCCCGCTACCCCTGAGCCTTAACTTTTGAGTTATAGTAGTAGTGCGTGCTTGTGTCAC 2740 || | |||||| ||| |||||||| |||||||| | | | | ||||| ||| Sbjct 15123 CCCTCGACTACCCTCGAGGTTTAACTTTGAAGTTATAG--CCAATACTTTCTTGTACCAC 15066 Query 2741 TGACTG 2746 |||||| Sbjct 15065 TGACTG 15060 Score = 140 bits (154), Expect = 8e-30 Identities = 229/329 (70%), Gaps = 7/329 (2%) Strand=Plus/Minus Query 3714 AAATAAAAATACTTATGCAGTACTTGTTGGTATCATTGATGTAAGATAAGTTTACGCGAC 3773 ||||||||||| | || || || | ||||| || || |||| ||||| | | ||||| Sbjct 15412 AAATAAAAATAATAATACAATATATTTTGGTTTCGCTGGCGTAAAATAAGCTCATGCGAC 15353 Query 3774 AGC-GCGTCCCGTGGGTATCCCAATTCACATATACACCCGGCTCAGCTTAGGTCACGATC 3832 | | || |||| ||||| | || | ||| || | |||||||||| | || Sbjct 15352 AATAGTAAAGAGTAGGTAACCCAACCCGCAGGTGTACCTGGTTGCGCTTAGGTCATGTTC 15293 Query 3833 GGTTCGCTAGGCTGCATGTGCATGGAATGTGCATCGGACCGACGTGCAGATATAAGCGTC 3892 ||| ||||||||||| | || |||| |||||||||| |||| |||||||| | | Sbjct 15292 GGTCCGCTAGGCTGCGTACACAAGGAAAGTGCATCGGAGCGACTTGCAGATACAGCAATT 15233 Query 3893 ACGCTGCAACTGGTGCAACTG------CACTCTAATGGGTCGAGCAAAACGGCCTAGGAG 3946 | ||||||| | | |||| ||||| ||| ||| ||| ||||| | | | Sbjct 15232 ATATTGCAACTCATCCGACTGTTATTGCACTCGAATTAGTCCAGCGTAACGGGCACAGCG 15173 Query 3947 TTAACACCATTGCATGATAGAGTTTTGTCTCCTGATTTCAAAAATACCACCCTCCGCTAC 4006 || || |||||||| || | | | || ||||| |||||| |||| |||||| |||| Sbjct 15172 TTGACGTCATTGCATCATGCATCTGTTTCCCCTGAATTCAAAGATACTACCCTCGACTAC 15113 Query 4007 CCCCGAGCCTTAACTTTGAAGATACAGCC 4035 || |||| |||||||||||| || |||| Sbjct 15112 CCTCGAGGTTTAACTTTGAAGTTATAGCC 15084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12839257733760