Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_008996.1 Length=5404 Score E Sequences producing significant alignments: (Bits) Value seq308529 156 1e-34 seq294754 147 7e-32 seq308101 129 2e-26 seq346467 93.3 1e-15 seq117018 82.4 3e-12 >seq308529 Length=9443 Score = 156 bits (172), Expect = 1e-34 Identities = 197/264 (75%), Gaps = 10/264 (4%) Strand=Plus/Minus Query 2149 CTTCTTGTTCCTCATGATCACGTTTGCTCCTCACTTCTTGTATCC--ACAGCGCGCGTTC 2206 ||||| | |||| | | |||||||||| |||| ||||| || ||| ||| | ||||| Sbjct 4609 CTTCTGGATCCTTACGCTCACGTTTGCGCCTCTCTTCTGGT-TCCTTACATT-CACGTTC 4552 Query 2207 GCGCTTGTCTCCTCGTTGCTTACCGTTCCAGCCGAATGACTTTAACATATTGAAAGATCT 2266 |||||| ||| || || |||| | || || |||||| || |||||||||||| | | Sbjct 4551 GCGCTTCTCTTCTTGTCGCTTTTCATTGTTGCTGAATGATTTCCACATATTGAAAGGT-T 4493 Query 2267 TTGCCTTTTTAGTGGTCACTCCAGAGTAAGCACGACGGGGCTAGTCGAATCGTCGTAGAA 2326 || ||||||| |||||| | | || |||||| |||||||| |||| | || | | || Sbjct 4492 TTTACTTTTTACTGGTCATTTCGGAATAAGCAAAACGGGGCTGGTCGCAATGTAGCAAAA 4433 Query 2327 CTAGTAGTTTGTCTATATTTAGGCACA----GAG-GGCCTGCAAGTTCTGAAGCAAAACT 2381 |||| ||||||||| | || |||||| | | ||||| |||| ||||||||| ||| Sbjct 4432 CTAGAGGTTTGTCTAGAGTTGGGCACAATATGTGTTGCCTGAAAGTGCTGAAGCAAGACT 4373 Query 2382 GGTACCGCTCATCACCGCCGATTC 2405 |||| ||||| |||| | ||||| Sbjct 4372 GGTATCGCTCTTCACTGTTGATTC 4349 Score = 140 bits (154), Expect = 1e-29 Identities = 185/252 (73%), Gaps = 16/252 (6%) Strand=Plus/Minus Query 4195 GATAATGGTCGCACACATACGTACCTAACAATTTGCATTGTTA---ATTAAAAATAAAAT 4251 || |||| | ||| || |||||| || ||| ||| ||||||| | |||||||||| | Sbjct 3640 GACAATGATTGCATACCTACGTATATAGCAAATTGTATTGTTATGAAATAAAAATAAATT 3581 Query 4252 AATGATGGATGACGTCAGTTATGG----GTTTTC------CAGAATTCAGGAAAAACATA 4301 |||||| |||||| | | | | || |||||| | ||| | || ||||| | Sbjct 3580 AATGATCGATGACCTAATTCAAGGTATGGTTTTCACAGAACTGAAATAAGAAAAAATTCA 3521 Query 4302 ACAATCATACCTTCAGCT-TTCGTACTCTTCGCTCGAGTCCAATAATAGAAAGAATTGGC 4360 ||| |||| | | |||| |||||||| |||||| |||||| ||||||||| ||||||| Sbjct 3520 ACATTCATTCTTCCAGCCCTTCGTACTTTTCGCTAGAGTCCGATAATAGAAGAAATTGGC 3461 Query 4361 TTTGTCGCCCATACGTAACTTCGTCACTAAAATGTAACG-TGATAAGA-ACATTGTTGCA 4418 || ||||||||||||| || | | |||||| || || | | | || | ||||||||| Sbjct 3460 TTCGTCGCCCATACGTGACGTTGCCACTAAGATATATTGCAGGAATGACATATTGTTGCA 3401 Query 4419 CATAATTCATAA 4430 || |||| |||| Sbjct 3400 CAGAATTTATAA 3389 Score = 96.9 bits (106), Expect = 1e-16 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1782 TGTTACCTACTGCTGTACAGAAGTACATGTAAGCTGGACACACATGTCAAATAAAAGTAT 1841 |||| |||| || |||| | ||||||||||||||||| || ||||||||||| |||| | Sbjct 5073 TGTTCCCTAATGATGTAGAAAAGTACATGTAAGCTGGGCATACATGTCAAATGAAAGAAA 5014 Query 1842 CACTTATACAATTAACAGTTTATTTTCAGTTAGCTTATACaaaataaaaaagtaaaaTAC 1901 || ||| | || |||| ||||||||||| ||||| |||||||| | | |||| Sbjct 5013 TACGAATAGAGGCAAGTTTTTAATTTCAGTTAGCGAATACATAATAAAAAGGCGATATAC 4954 Query 1902 ACCAATAC 1909 | ||||| Sbjct 4953 AAGAATAC 4946 Score = 91.5 bits (100), Expect = 5e-15 Identities = 103/138 (75%), Gaps = 10/138 (7%) Strand=Plus/Minus Query 1167 GCTCAACCAATCTTTGTACCACGTCAGCGT----AGCATGGCTACTTGCGTCTGTAGGTG 1222 ||| ||||||||||||||| |||||| ||| ||| | ||| || | || || ||||| Sbjct 7171 GCTTAACCAATCTTTGTACGACGTCACCGTAGGAAGCCTAGCTGCTCGTGTTTGCAGGTG 7112 Query 1223 GACAGCTCCAACCTCTGGCTGCTTGTTTCAG------CTAAGTTAACTCTGGCTACTTTA 1276 |||| ||||||| |||| |||| | ||| |||||||| ||||||||| |||| Sbjct 7111 GACAACTCCAACATCTGCTTGCTCATGCCAGCTGAATCTAAGTTACCTCTGGCTATTTTA 7052 Query 1277 CAGCATATGACATACGCG 1294 | || ||||| ||| || Sbjct 7051 CGACACATGACGTACTCG 7034 >seq294754 Length=8303 Score = 147 bits (162), Expect = 7e-32 Identities = 180/244 (74%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 3860 ACATATCGAAAGATCTTCATTTTTCACTGGTCACTTTGAAATTAGCAAGACAAGGTTTGT 3919 |||||| || || | || |||| |||||| |||||| ||| ||||| || || | || Sbjct 439 ACATATTGAGAGGTTTTTGCTTTTTACTGGTGACTTTGGAATAAGCAAAACGGGGCTGGT 498 Query 3920 CGAACCGTAGCAAAACAAGCGGTCTGTTTAGATTCGGGCACAATGTGTGTTGCCTATAAG 3979 |||| |||| ||||| || ||| ||| ||||||||||||||||||||||||||| ||| Sbjct 499 CGAAATGTAGTAAAACTAGAGGTTTGTCTAGATTCGGGCACAATGTGTGTTGCCTGAAAG 558 Query 3980 TGCTGCTGCAAAACTGGTGCCGCTCCGCACTCGT--TTAACTTATTTAAAGAGTTCAAGA 4037 ||||| |||| |||||| ||||| |||| | || |||| |||| ||| | Sbjct 559 TGCTGAAGCAAGACTGGTATCGCTCTTCACTGCTTATTCCGTTATATAAACGTTTCTCCA 618 Query 4038 AAAGTCGGACCTGATA---AGCACGTATGTGTGACTAACTTGAATTATATATTATTAATA 4094 | | ||||| ||||| || ||||| |||||||| || || | |||||| | ||| Sbjct 619 ACGGCCGGACGTGATACACAGGGCGTATACGTGACTAAGTTCAACCAAATATTAATCATA 678 Query 4095 AATT 4098 |||| Sbjct 679 AATT 682 Score = 125 bits (138), Expect = 2e-25 Identities = 181/251 (72%), Gaps = 17/251 (7%) Strand=Plus/Plus Query 4198 AATGGTCGCACACATACGTACCTAACAATTTGCATTGTT---AATTAAAAATAAAATAAT 4254 |||| | ||| || ||||||| || ||| || |||||| || ||||||||||||||| Sbjct 1282 AATGATTGCATACCTACGTACATAGCAACTTATATTGTTTTGAAATAAAAATAAAATAAT 1341 Query 4255 GATGGATGACGT------CAGTTATGGGTTTTCCA-----GAATTCAGGAAAAACATAAC 4303 || |||||| | || ||||| ||| || ||| | || ||||| ||| Sbjct 1342 TATCGATGACCTAATGCAAAGGTATGGTTTTCACAGAACTGAAGTAAGAAAAAATTCAAC 1401 Query 4304 AATCATACCTTCAG-CTTTCGTACTCTTCGCTCGAGTCCAATAATAGAAAGAATTGGCTT 4362 ||||||| | ||| | | ||| || |||| | |||||| ||||||||| |||||||||| Sbjct 1402 GATCATACTTCCAGTCCTCCGTGCTTTTCGTTAGAGTCCGATAATAGAAGGAATTGGCTT 1461 Query 4363 TGTCGCCCATACGTAACTTCGTCACTAAAATGTAACG-TGATAAGA-ACATTGTTGCACA 4420 |||| |||||||| |||| | |||||| || || | | | || | ||||||| ||| Sbjct 1462 CGTCGTCCATACGTGACTTTGCCACTAAGATATACTGCAGGAATGACAGATTGTTGTACA 1521 Query 4421 TAATTCATAAC 4431 || | ||||| Sbjct 1522 GAACTTATAAC 1532 >seq308101 Length=9007 Score = 129 bits (142), Expect = 2e-26 Identities = 162/218 (74%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 2202 CGTTCGCGCTTGTCTCCTCGTTGCTTACCGTTCCAGCCGAATGACTTTAACATATTGAAA 2261 ||||||||||||||| || |||||| | || ||||||| || |||||||| | Sbjct 8053 CGTTCGCGCTTGTCTTCTTCTTGCTTTGCATTGTTTCCGAATGGTTTCCCCATATTGAGA 7994 Query 2262 GATCTTTGCCTTTTTAGTGGTCACTCCAGAGTAAGCACGACGGGGCTAGTCGAATCGTCG 2321 | | |||| ||| ||| |||| ||| || ||||| ||| ||| ||||| || | Sbjct 7993 GGTTTTTG-CTTCTTACTGGTGACTTTGGAACAAGCAAAACGAAGCTGGTCGAGATGTAG 7935 Query 2322 TAGAACTAGTAGTTTGTCTATATTTAGGCACA----GAGG-GCCTGCAAGTTCTGAAGCA 2376 | |||||| ||||||||| |||| |||||| | || ||||| |||| |||||||| Sbjct 7934 CAAAACTAGAGGTTTGTCTAGATTTTGGCACAATGTGTGGTGCCTGAAAGTGCTGAAGCA 7875 Query 2377 AAACTGGTACCGCTCATCACCGCCGATTCC-TTATATA 2413 | ||||||| ||||| |||| || |||||| ||||||| Sbjct 7874 AGACTGGTAGCGCTCTTCACTGCTGATTCCGTTATATA 7837 Score = 125 bits (138), Expect = 2e-25 Identities = 181/251 (72%), Gaps = 16/251 (6%) Strand=Plus/Minus Query 4198 AATGGTCGCACACATACGTACCTAACAATTTGCATTGTT---AATTAAAAATAAAATAAT 4254 |||| | ||| || ||||||| || ||| || |||||| || ||| ||||||||||| Sbjct 7145 AATGTTTGCATACCTACGTACATAGCAAATTCTATTGTTTTGAAATAATAATAAAATAAT 7086 Query 4255 GATGGATGACGTCAGTTATG----GGTTTTC------CAGAATTCAGGAAAAACATAACA 4304 ||| |||||| | | | | ||||||| | ||| | || ||||| ||| Sbjct 7085 GATCGATGACCTAATGCAAGGCATGGTTTTCACAGAACCGAAGTAAGAAAAAATGCAACG 7026 Query 4305 ATCATACCTTCAG-CTTTCGTACTCTTCGCTCGAGTCCAATAATAGAAAGAATTGGCTTT 4363 |||||| | ||| | | ||| || |||||| |||||| ||||||||| ||||||||| Sbjct 7025 ATCATAGTTGCAGCCCTCCGTGCTTTTCGCTAGAGTCCGATAATAGAAGAAATTGGCTTC 6966 Query 4364 GTCGCCCATACGTAACTTCGTCACTAAAATGTA-ACGTGATAAGA-ACATTGTTGCACAT 4421 |||| |||||||| |||| | |||||| | || | | | || | ||||||||||| Sbjct 6965 GTCGTCCATACGTGACTTTGCCACTAAGAAATACTCAAGGAATGACAGATTGTTGCACAG 6906 Query 4422 AATTCATAACT 4432 |||| |||||| Sbjct 6905 AATTTATAACT 6895 Score = 104 bits (114), Expect = 8e-19 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 3861 CATATCGAAAGATCTTCATTTTTCACTGGTCACTTTGAAATTAGCAAGACAAGGTTTGTC 3920 ||||| || || | || || | |||||| |||||| || ||||| || | | | ||| Sbjct 8003 CATATTGAGAGGTTTTTGCTTCTTACTGGTGACTTTGGAACAAGCAAAACGAAGCTGGTC 7944 Query 3921 GAACCGTAGCAAAACAAGCGGTCTGTTTAGATTCGGGCACAATGTGTGTTGCCTATAAGT 3980 || |||||||||| || ||| ||| |||||| ||||||||||||| ||||| |||| Sbjct 7943 GAGATGTAGCAAAACTAGAGGTTTGTCTAGATTTTGGCACAATGTGTGGTGCCTGAAAGT 7884 Query 3981 GCTGCTGCAAAACTGGTGCCGCTCCGCACT 4010 |||| |||| |||||| ||||| |||| Sbjct 7883 GCTGAAGCAAGACTGGTAGCGCTCTTCACT 7854 Score = 87.8 bits (96), Expect = 6e-14 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1782 TGTTACCTACTGCTGTACAGAAGTACATGTAAGCTGGACACACATGTCAAATAAAAGTAT 1841 |||| |||| ||||||| | ||||||||||||||| || ||||||||||| |||| | Sbjct 8699 TGTTTCCTAATGCTGTAGGAATGTACATGTAAGCTGGGCATACATGTCAAATGAAAGGAA 8640 Query 1842 CACTTATACAATTAACAGTTTATTTTCAGTTAGCTTATACaaaataaaaaagtaaaaTAC 1901 || ||| | || ||| ||||||||||| ||||| ||| |||| || | |||| Sbjct 8639 TACGAATAGAGGCAAGTTTTTTATTTCAGTTAGCAAATACATAATGAAAAGGTGATATAC 8580 Query 1902 ACCAATAC 1909 | ||||| Sbjct 8579 AAGAATAC 8572 >seq346467 Length=4730 Score = 93.3 bits (102), Expect = 1e-15 Identities = 101/134 (75%), Gaps = 10/134 (7%) Strand=Plus/Plus Query 1171 AACCAATCTTTGTACCACGTCAGCGT----AGCATGGCTACTTGCGTCTGTAGGTGGACA 1226 ||||||||||||||||| |||| ||| ||| | ||| || |||| || ||||||||| Sbjct 1128 AACCAATCTTTGTACCATGTCACCGTAGGAAGCCTAGCTGCTCGCGTTTGCAGGTGGACA 1187 Query 1227 GCTCCAACCTCTGGCTGCTTGTTTCAG------CTAAGTTAACTCTGGCTACTTTACAGC 1280 ||||||| |||| |||| | ||| |||||||| ||||||||| ||||| || Sbjct 1188 ACTCCAACTTCTGCTTGCTCATGCCAGCTGAATCTAAGTTACCTCTGGCTATTTTACGGC 1247 Query 1281 ATATGACATACGCG 1294 | |||| ||| || Sbjct 1248 ACTTGACGTACTCG 1261 >seq117018 Length=33803 Score = 82.4 bits (90), Expect = 3e-12 Identities = 101/138 (73%), Gaps = 10/138 (7%) Strand=Plus/Minus Query 1167 GCTCAACCAATCTTTGTACCACGTCAGCGTAGCATGGCTA----CTTGCGTCTGTAGGTG 1222 ||| ||||||||||||||||| |||| ||||| | | ||| || | | || ||||| Sbjct 33096 GCTTAACCAATCTTTGTACCATGTCACCGTAGGAAGCCTAACTGCTCGTGCTTGCAGGTG 33037 Query 1223 GACAGCTCCAACCTCTGGCTGCTTGTTTCAG------CTAAGTTAACTCTGGCTACTTTA 1276 |||| | ||||| |||| |||| | ||| |||||||| ||||||||| |||| Sbjct 33036 GACAACGCCAACTTCTGTTTGCTCATGCCAGCTGAATCTAAGTTACCTCTGGCTATTTTA 32977 Query 1277 CAGCATATGACATACGCG 1294 | ||| |||| ||| || Sbjct 32976 CGGCACATGATGTACTCG 32959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17113697808480