Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value SEQ22875 152 5e-32 seq271924 104 2e-17 seq141579 93.3 4e-14 seq337017 87.8 2e-12 >SEQ22875 Length=3501 Score = 152 bits (168), Expect = 5e-32 Identities = 268/385 (70%), Gaps = 4/385 (1%) Strand=Plus/Plus Query 27332 TGCAACGCCGACGGCTGCGCCACCAGCG-CGCCTGTGTCCGTCGTCGTGGCCGACACCGA 27390 ||||| |||||||||||| || |||||| |||| || | || ||| |||||||||| Sbjct 3092 TGCAATGCCGACGGCTGCACCGCCAGCGACGCCACTGAAATT-GTGGTGTCCGACACCGA 3150 Query 27391 CGGTTCGCATTTGGCGCCGCTGCCTTA-CGTTTGGTCCGAAAACAACAAACCGTACGAAT 27449 ||| |||||||||||| || | | || | ||||| || |||||||| || Sbjct 3151 CGGCAGCCATTTGGCGCCGTTGAAAGAGCCGCTGCTG-GAAAAGAATAAACCGTATAAAC 3209 Query 27450 CGGGCACGGATCGCGTCGTCGCCGCGTACTTTGTCGAATGGGGTGTGTACGGCCGTAATT 27509 | | | || |||| | || || ||||| ||||| || ||||| || |||| Sbjct 3210 AGAATTCCGGCAAAGTGGTCGGTTCTTATTTCGTCGAGTGGGGCGTTTACGGGCGCAATT 3269 Query 27510 TTGCCGCGGACCGCGTACCGGCGCCCAACCTGTCACATTTACTATACGGGTTCGTGCCGA 27569 | ||| ||| | ||||||| |||||| | || | || ||||| || | |||| Sbjct 3270 TCACCGTCGACAAGATCCCGGCGCAGAACCTGACTCACCTGCTGTACGGCTTTATCCCGA 3329 Query 27570 TATGCGGCGGCGACGGCATCAACGACAGCCTTAAAACTATTCCGGGTAGTTTCGAAGCGT 27629 | ||||||||| ||||||||||||||||||| ||| ||| || || ||| | ||| Sbjct 3330 TCTGCGGCGGCAACGGCATCAACGACAGCCTGAAAGAGATTGAAGGCAGCTTCCAGGCGC 3389 Query 27630 TGCAAAAGTCGTGCGCGGGTCGTGAAAACTTTAAAGTGGCCATTCACGATCCGTGGGCTG 27689 |||| || ||| ||| || || | || ||||| |||| |||||||||| || | Sbjct 3390 TGCAGCGCTCCTGCCAGGGCCGCGAGGATTTCAAAGTCTCCATCCACGATCCGTTCGCCG 3449 Query 27690 CATTGCAAAAACCACAAAAAGGCGT 27714 | |||||||| | || || ||||| Sbjct 3450 CGCTGCAAAAAGCGCAGAAGGGCGT 3474 >seq271924 Length=17277 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||| || |||||||||| | || | | ||||| | |||||| || ||| | | Sbjct 10568 CTTTTTGGATATTGTAATCTGAAAGCGTTCTGCCATCTTCCAACTGCTTCCCAGCAAAGA 10627 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372 | | |||||||| |||||||| || ||||| || ||||| || ||| ||||| ||| Sbjct 10628 TTAAGCGCTGCTGATCGGGAGGTATACCTTCCTTGTCTTGAATCTTT-GCTTTGACATTT 10686 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | |||||| || || ||||||| || | ||| || || |||| || || || Sbjct 10687 TCTATTGTATCTGATGCTTCTACTTCTAATGTGATGGTTTTCCCCGTCAGGGTCTTCACA 10746 Query 64433 AAAATTTGCATTTT 64446 ||||||||||| || Sbjct 10747 AAAATTTGCATCTT 10760 >seq141579 Length=1399 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | ||| || || || || |||||||| || | Sbjct 1036 ACCACCACGCAGACGGAGCACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGA 1095 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || |||| || ||||||||||| || | ||||| ||||||||||| ||||| Sbjct 1096 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGG 1155 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || || | ||||| Sbjct 1156 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 1215 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | ||||| || || || || || ||||| || |||||| Sbjct 1216 CTCGAGGGTGATAGTCTTCCCTGTTAAGGTCTTGACGAAGATCTGCATT 1264 >seq337017 Length=19082 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || |||||||| |||| | ||||| | || || |||||||| || || | | Sbjct 18020 CTTTCTGTATGTTGTAGTCTGACAAAGTGCGACCATCCTCCAGCTGCTTCCCAGCGAAGA 18079 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | || ||||||||||| || || || ||||| || || ||||| || |||||| || Sbjct 18080 TAAGTCGCTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGTATCTTGGCTTTTACATTCT 18139 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || || || ||||| || | || | ||||| || || || || || || | Sbjct 18140 CTATAGTGTCTGAAGCCTCCACCTCAAGGGTGATTGTCTTACCAGTTAATGTCTTAACAA 18199 Query 64434 AAATTTGCATTTT 64446 | || |||||||| Sbjct 18200 ATATCTGCATTTT 18212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497414585470720