Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_011216.1 Length=37635 Score E Sequences producing significant alignments: (Bits) Value seq219735 123 6e-24 seq121209 109 1e-19 >seq219735 Length=5934 Score = 123 bits (136), Expect = 6e-24 Identities = 610/950 (64%), Gaps = 42/950 (4%) Strand=Plus/Plus Query 3677 ATCTTCGCTTCCACCACATCGAGCACACCGGTCTTGCGGTTGAGGCCACCGACCAGGCAC 3736 |||| ||| || ||||| || ||||| || ||| ||||||||| ||| |||||||| | Sbjct 2620 ATCTGCGCCTCTACCACGTCTAGCACGCCCGTCATGCGGTTGAAGCCGCCGACCAGCAGC 2679 Query 3737 GCACACGGGTCACGGCCCTTGTTGTGCTTGCCCATCGACGGATCGTGTGCACCGAAGAAA 3796 || | |||||||||| ||| || || || | || || | |||||||||||| Sbjct 2680 GCCGAGGGGTCACGGCTGTTGCCGTTTTTACCGAGGCTTGGGTCCAGCGCACCGAAGAAA 2739 Query 3797 ATCCAGGCGT-CGGACGGATGCACCCAGTACACCA-GCTTCTGG--AACGGCGCGTTCTC 3852 |||| || | | ||| || |||||| | | || ||| |||||||| | ||| Sbjct 2740 CTCCACTCGCGCAGGCGGTTG-ACCCAGAAGGTGATGCAGGTGGCGAACGGCGCATCCTC 2798 Query 3853 GCTATTGGTCGGATCGTTCTGATATTCGCAATCGAACGCGTGGTGATCGTT---CGCGCG 3909 | || ||| || ||||||||||||| || |||| | || ||| |||||| Sbjct 2799 ACCGCTGACCGGGTCATTCTGATATTCGCTGTCAAACGTGGAATGGCCGTCACGCGCGCG 2858 Query 3910 AATCTTCATCAGGCGCA-ACAGCGGGCGCATGGCCGGCCACGATACGACAGCGCCATCGT 3968 || |||||| |||| | || |||||| || | ||| || || || | || | | Sbjct 2859 GATGAGCATCAG-CGCATAGAGTGGGCGC---GCAGACCAGGACACCACGGACCCTGCTT 2914 Query 3969 CCATTTCAGCCTTGCGCTGCGCATAGAACGCGT-CGC-AT-GCTTCCTCGCCTTCAT--- 4022 |||| ||| | ||||| | || || ||| ||| || ||||| | |||||| Sbjct 2915 CCATCTCATCACGATGCTGCTCGTAAAAGGCGCGCGCCATCGCTTCGCCATCTTCATCGT 2974 Query 4023 ---TCAGGAATACTTCTTCCCACTTTTCCCACAGATCCAGCCGCTTCGGCCACTCGATGA 4079 | | | || |||||||| |||||||| || | ||||||||| | | Sbjct 2975 GATTTCGCAGGACCTCTTCCCAGCGGTCCCACAGCGTCATATCCGACGGCCACTCAACCA 3034 Query 4080 TGGCGCGGAA----TTTATGCGACTCCCATAGCGGGCTGCGATGCACGCGGTTGGCCACG 4135 || ||| ||| |||| ||| ||||| | | |||| |||| Sbjct 3035 GCGCCTTGAAGCGTTTTCTGCG----CCACAGCGGATTTTTGAGGGTGCGGGACAGCACG 3090 Query 4136 CCGTCGTAATGCAGAATCGTGTTGAGGTAGATGATGTCCATCGAGCCGTCCGGCGGACCG 4195 ||| || ||||| || || || |||||| | ||| | | | | ||||| |||| Sbjct 3091 GAGTCATAGTGCAGGATGGTACCGATGTAGATCACGTCGAACTTGGCA-CCGGC--ACCG 3147 Query 4196 ---AGCGGCATCACGACCTTTTTGACCCAGCGTTCAAGCTTGTCGCGCTGGGTCTTCTGC 4252 ||||| | |||| |||||| | |||| || ||||||||||||||| | | Sbjct 3148 CCCAGCGGTAGCACGGTCTTTTTCAGCCAGTTATCCAGCTTGTCGCGCTGGTCCGGGTTA 3207 Query 4253 TGCACGTTCTCGTCGTTCTCGATGTCGTCGAGCAACACCAGGTCAGGCCGAAACGGGCCA 4312 | || ||| || || || || ||||| || | | ||||| || || | || || Sbjct 3208 CGTACCAGCTCATCATTTTCAATATCGTCCAGGATGGCGAGGTCCGGGCGGTAAGGACCG 3267 Query 4313 TGCCGAATACCGCGCATCCGCTTGCCCGAGCCGAACGCCTGCAGCTTGATGTCGGTTGCC 4372 || || | ||||||| | ||| || ||| |||||| |||||| ||||| || Sbjct 3268 TGACGCAGGCCGCGCAGCTTCTTACCGCTGCCTGCTACCTGCACCTTGATATCGGTGGCA 3327 Query 4373 GTTAGCGCAACGCCGACGTTCCAAACGCGCCCCTTGCCG-ACGTGTTCGGGAAAGTCCAT 4431 || || || | | ||| ||||||||| ||| | | || |||||| ||||| Sbjct 3328 GTGAGGATGGTACCCATCTGCCAGACGCGCCCCGGCCCGCAGGCGTCAGGGAAA-TCCAT 3386 Query 4432 CGCGAGCCGCGGATTGTCGGTCAGCTCGACCTTGATCGCCTCCAGCATCATCTGCGCCTG 4491 || || ||||| | ||||||| ||||||| || || |||||| | ||||| Sbjct 3387 TTTCAGGCGGGGATTCCAGCACAGCTCGGCCTTGATGGCTTCGAGCATCGGATAGGCCTG 3446 Query 4492 GTCGCTGCTGTCCATCACGAT--CGGGATGAATTTCTTCGCCTGGCGGATGATGCAAAGC 4549 ||| | |||||| | ||| | |||| | || ||| || | || ||||| Sbjct 3447 GTCAATAGAGTCCATAATGATGACCGGAT--ACTTTTTCAGCTCCAGAATAATGCACCAG 3504 Query 4550 AACGTAAAAACCTGCGTAACCAACGTTGATTTCGCTTCGCCGCGCGGTGC 4599 | |||||| | |||||| || | || || || || || || ||||| || Sbjct 3505 ATCGTAAACAGCTGCGTGACAATGGTGGACTTGGCCTCACCACGCGGCGC 3554 >seq121209 Length=3652 Score = 109 bits (120), Expect = 1e-19 Identities = 200/288 (69%), Gaps = 14/288 (5%) Strand=Plus/Plus Query 14681 CGTTCGACGAGCGCCTGCAGGCGGCGAAGACCCTCATCGACGAGTGCATCAACGAATGGG 14740 ||||||| ||||||||||||||||| || | || || || |||||| | ||| ||| Sbjct 3258 CGTTCGATGAGCGCCTGCAGGCGGCAAAATCGCTGATTGATGAGTGCCTGTCCGACTGGA 3317 Query 14741 CGCGCGGCAGCGA-TCCGAAGATCCAGGTGCTGGTTCAGCAGGCGTTCGAGACGGACAAG 14799 | || | ||| |||| ||||||| | | || | | || ||| |||| || ||| Sbjct 3318 C-CGAAGGTGCGCGTCCGGAGATCCACGCCATCATTAACCGCGCCTTCCAGACTGAGAAG 3376 Query 14800 GAAGGCAAGATCAACGTCGGCCGCGTACTTGCGCTGCGCCGCTTGGAGATCACGGACGAC 14859 |||||| | | ||| || | ||| || || ||||||||| |||| || ||||| Sbjct 3377 GAAGGCGAAGTAAACACCGCCGCCGTGCTGGCACTGCGCCGCCTGGAAATTGATGACGAG 3436 Query 14860 AAGTGG--CAACGCGCCATGCAGGCGATCGGCGAGTCGGTGCAGGTCGTCGGCACGAAGA 14917 ||| ||| || |||||||||||| ||||| |||| ||||| |||| |||| Sbjct 3437 CGCTGGAGCAAGGC--CATGCAGGCGATTGGCGAAGCGGTTCAGGTGGTCG----GAAGT 3490 Query 14918 CG----TATATGCGCTTCTACGAGCGCGTCGAGGGCAGCGAACAATAC 14961 || || || ||| | || |||||||| | | |||||| || ||| Sbjct 3491 CGTTCCTACATCCGCGTTTATGAGCGCGTGGGCGACAGCGATCAGTAC 3538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119800233373632