Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value SEQ22875 116 2e-21 seq271924 89.7 3e-13 >SEQ22875 Length=3501 Score = 116 bits (128), Expect = 2e-21 Identities = 181/254 (71%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 6290 ACGCCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTCACCTTGAAGTCA 6349 ||||| ||||| | |||||||| |||||| | ||||| || || ||||| || Sbjct 3474 ACGCCCTTCTGCGCTTTTTGCAGCGCGGCGAACGGATCGTGGATGGAGACTTTGAAATCC 3415 Query 6350 TCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCTTGAGGG 6407 ||||| || |||||| ||| ||||||| ||| | || ||||| || ||| Sbjct 3414 TCGCGGCCCTGGCAGGAGCGCTGCAGCGCCTGGAAGCTGCCTTC--AATCTCTTTCAGGC 3357 Query 6408 CGTCGTTTATGCCGTTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGAT 6467 |||||| |||||||| || || || || || || || |||||||||||||| ||||| | Sbjct 3356 TGTCGTTGATGCCGTTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGAGTCAGGT 3297 Query 6468 TAGGTATTGGTACCTTGTCAATGG-GAAACTGTCTGCCATACACTCCCCACTCCACGAAA 6526 | | || | |||||| | || |||| || | || || || |||||||| |||||| Sbjct 3296 TCTGCGCCGGGATCTTGTCGACGGTGAAATTG-CGCCCGTAAACGCCCCACTCGACGAAA 3238 Query 6527 TACGCACCGACGAC 6540 || | |||||| || Sbjct 3237 TAAGAACCGACCAC 3224 >seq271924 Length=17277 Score = 89.7 bits (98), Expect = 3e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 |||| || || || || || ||||| ||| |||| |||| ||| || || ||||| | Sbjct 10568 CTTTTTGGATATTGTAATCTGAAAGCGTTCTGCCATCTTCCAACTGCTTCCCAGCAAAGA 10627 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 ||| || ||||| || | || | || |||||||| |||||| |||||| | Sbjct 10628 TTAAGCGCTGCTGATCGGGAGGTATACCTTCCTTGTCTTGAATCTTTGCTTTGACATTTT 10687 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 |||| | || || || || || | || |||||||| ||||| || |||||||||| Sbjct 10688 CTATTGTATCTGATGCTTCTACTTCTAATGTGATGGTTTTCCCCGTCAGGGTCTTCACAA 10747 Query 34972 AGATCTGCATATTCGTAGACTTGT 34995 | || ||||| || || |||||| Sbjct 10748 AAATTTGCATCTT-GTGAACTTGT 10770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323220791326464