Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq259863 109 4e-18 seq328299 105 5e-17 seq271924 86.0 5e-11 >seq259863 Length=6443 Score = 109 bits (120), Expect = 4e-18 Identities = 373/573 (65%), Gaps = 20/573 (3%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 |||||| | ||||| ||||| |||||||| || || || |||| | || | ||| Sbjct 1928 GGAGATACACATCTGGGTGGTGAAGATTTCGACAACAGGATGGTGAACCAC--TTTGTCC 1985 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAA---GCTCTTCGTC 551904 |||| || || || ||| |||| ||||| ||||| |||| ||| |||| | Sbjct 1986 AAGAGTTCAAGCGCAAATACAAGAAGGATCTG---ACATCAAACAAACGTGCTGTTCGGC 2042 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | | |||| || || ||| | || || || | || || ||| ||| || | | | Sbjct 2043 GCTTGCGAACCGCATGTGAACGGGCGAAGCGTACACTGTCCTCTTCTACCCAGGCAAGCA 2102 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 | || |||| || || ||||| |||||||| | | || | || || |||| | | Sbjct 2103 TAGAGATAGACTCTTTGTTTGAAGGAATTGACTTCTACACATCGATCACGCGGGCAAGGT 2162 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAA 552084 |||| || | | | ||||| || ||| ||||| |||||||| || ||| || Sbjct 2163 TTGAGGAGCTGAATGCAGATCTGTTCAGAGGCACAATGGAACCAGTGGAGAAAGCGTTGC 2222 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 | ||| ||||||| || || | | | || || |||||||| || || ||||| || Sbjct 2223 GTGATGCAAAGATGGACAAGGCTCAGATCCACGATATTGTGCTAGTCGGAGGATCCACTC 2282 Query 552145 GAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | || || || | | || || | ||| | | ||||||||||| | | || | Sbjct 2283 GCATCCCCAAGGTGCAGAAACTGCTGCAAGATTTC--TTCAATGGTAAGGAGCTGAACAA 2340 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | ||||| ||||||||||| || ||||| || || | || || || || | | Sbjct 2341 GTCTATCAATCCCGATGAGGCTGTGGCATATGGCGCGGCTGTCCAGGCGGCCATCTTGGC 2400 Query 552263 TG--GACAA-ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATC 552319 || ||||| |||| | || | ||| || | | ||| | ||||| ||||| || || Sbjct 2401 TGGCGACAAGTCTGAGG---AAGTGCAAGATCTGCTGCTTTTGGATGTAACTCCACTTTC 2457 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGAC 552352 || ||| | || || | ||||| | ||||| Sbjct 2458 GCTGGGTATCGAGACTGCAGGAGGAGTAATGAC 2490 >seq328299 Length=1126 Score = 105 bits (116), Expect = 5e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 ||| || ||||||| | ||||| || |||||||| || || |||||||| |||||||| Sbjct 856 GGTGAAAAAGTTACAAACGCAGTTATTACTGTACCTGCGTACTTTAATGATGCACAACGT 915 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 ||||| ||||||||||| || || ||||| | | ||| |||||| | || ||| Sbjct 916 CAAGCAACTAAAGATGCCGGTAAAATCGCTGGTTTAGAAGTTGACCGTATTGTGAACGAA 975 Query 550502 CCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || || || |||||| | || ||||| | |||||| Sbjct 976 CCAACAGCCGCTGCATTAGCGTATGGTTTAGATAAA 1011 Score = 104 bits (114), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||| ||||||| ||| |||||||||||||| | || ||| | | || || Sbjct 1002 ACCATACGCTAATGCAGCGGCTGTTGGTTCGTTCACAATACGGTCAACTTCTAAACCAGC 943 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| |||||| ||| ||||||||||||||||||||||| || ||||| ||||| Sbjct 942 GATTTTACCGGCATCTTTAGTTGCTTGACGTTGTGCATCATTAAAGTACGCAGGTACAGT 883 Query 361825 AATCACTGCTTTTTCAACTT 361844 ||| ||||| ||| ||||| Sbjct 882 AATAACTGCGTTTGTAACTT 863 >seq271924 Length=17277 Score = 86.0 bits (94), Expect = 5e-11 Identities = 135/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||||||||| | || ||||| |||||| | || || || ||||| || Sbjct 10571 TTTGG--ATATTGTAATCTGAAAGCGTTCTGCCATCTTCCAACTGCTTCCCAGCAAAGAT 10628 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | | |||||||| ||||| || ||||| || |||||||| ||| ||| || || Sbjct 10629 TAAGCGCTGCTGATCGGGAGGTATACCTTCCTTGTCTTGAATCTTTGCTTTGACATTTTC 10688 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 |||||||| | || ||| ||| | || | ||||| || || || || || || | Sbjct 10689 TATTGTATCTGATGCTTCTAC-TTCTAATGTGATGGTTTTCCCCGTCAGGGTCTTCACAA 10747 Query 563465 AAATTTGCAT 563474 |||||||||| Sbjct 10748 AAATTTGCAT 10757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4010411576093120