Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_016652.1 Length=49330 Score E Sequences producing significant alignments: (Bits) Value seq216857 242 1e-59 seq311842 181 3e-41 seq234526 96.9 1e-15 >seq216857 Length=94037 Score = 242 bits (268), Expect = 1e-59 Identities = 718/1094 (66%), Gaps = 75/1094 (7%) Strand=Plus/Plus Query 2068 CGCATGGCCCGCGGGGACGGCCGCGCGTCGTCGGTGCTTCGTGCGATCGGGCTTCCGATC 2127 ||||||| ||||| ||||| ||| | ||||| || | || | ||||| |||||| Sbjct 32038 CGCATGGTCCGCGAGGACGCCCGAATTGCATCGGTACTCAGAGCTGTTGGGCTGCCGATC 32097 Query 2128 CGCCGCACCACGTGGCGTCTCGACCAGAACGGCGCCCGCGACGAGGTGACCGAGTTCGTC 2187 |||||||||||||||||| || | ||||| ||| | |||||||| ||| |||||| Sbjct 32098 CGCCGCACCACGTGGCGTATCCGGCGCAACGGTGCCAGTGACGAGGTTGTCGAATTCGTC 32157 Query 2188 GCTCGCAACCTCAGGTTGGGGATCGCGGGCTCGGACT-----------ATGTACCCA--- 2233 || || |||||| | | |||| |||| | || | | |||| Sbjct 32158 GCGCGAAACCTCGGACTTCCCATCGAGGGCGCCGAGGGCACCGAAGACAAGAACCCGAAA 32217 Query 2234 -CGACCCGCACCCGGGGGCGCTTCTCGTGGCGGAGTCACCTGCAGCCCGCGCTGCTATCG 2292 | || || || || || || ||||| ||| | ||||| |||| || || | || Sbjct 32218 TCCACGCGTACTCGCGGCCGATTCTCATGGGACAAGCACCTACAGCAGGCACTCATGTCC 32277 Query 2293 CTGCAATACGGGCACGCGTTCTTCGAGCAGATCTACCAGCTCGAA---------CCGGAT 2343 |||| ||||||||||||| | ||||||||| | || ||| |||| ||||| Sbjct 32278 CTGCGATACGGGCACGCGGTGTTCGAGCAGGTGTATCAGATCGAGGGCGAGGGCCCGGAA 32337 Query 2344 GGCAAACTGGGGCTGCGCAAACTAGCACCACGTCCGCAGCGCACGATCTCGAAGATCACC 2403 | | | || ||||||||| || || |||||||| || |||||||||||| | Sbjct 32338 GCCCGAGCGGTGCTGCGCAAGCTTGCTCCACGTCCCCAAGCCACGATCTCGAAATGGAAT 32397 Query 2404 GTCGCGCTGGATGGCGGGCTGGAGTCGATCACCCAGGAGCCGCCCGTCGGCAAGCTCACG 2463 || || | || |||||||| | |||||| || ||| ||||| | || |||| Sbjct 32398 GTGGCCCGCGACGGCGGGCTCGTATCGATCG---AGCAGCAGCCCGCCAGCGCCTTCACC 32454 Query 2464 GCTGCCTC---TGCGAT-------CC------CGGAC----GGGTTCACCA-TCCCGGTC 2502 | ||| || || ||| || ||| | || ||| | || ||| Sbjct 32455 GTTGCATCCAATGGGATGACCATTCCTTATGGCGGCCCATTGGATTCGGTGCTGCCCGTC 32514 Query 2503 AACCGGCTCGTGGCGTACGTGCACGAGCCAGAGCCCGGCCAATGGCAGGGAAACTCGATC 2562 | || || || | || |||||||||| || || ||| ||| || ||| | Sbjct 32515 GAGCGTCTGGTCGTCTATTTGCACGAGCCCGATCCAGGCGTGTGGATCGGCAACAGCCTG 32574 Query 2563 CTCCGTCCGGCCTACAAGCACTGGATCATGAAGGACGAGCTCATGCGGATCCAGGCTGCG 2622 || ||||| || ||||||||||||| | || |||||||| ||||| ||| |||| || Sbjct 32575 CTACGTCCCGCGTACAAGCACTGGAAGCTCAAAGACGAGCTGATGCGCATCGAGGCCGCC 32634 Query 2623 GCCGCCCGCCGCAACGGCATTGGCGTCCC---GGTC---GGCACCGCGTCGAAGTCC--- 2673 || || |||||| ||||||| || || || | || |||| || | | ||| Sbjct 32635 GCAGCACGCCGCCACGGCATCGGTGTGCCTTGGATCAGGGGCAACGAAACTGATTCCCAA 32694 Query 2674 GACGATCAGGCCGAGGTCGACCACATGCGGGACCTGGCGTCGAACTTCAAGGGCGGCATG 2733 ||||| || || || || ||| |||| | || || | || || || ||| | Sbjct 32695 GACGA--AGAACGTATGGGAGAAC-TGCTGGACATCGCATCCAGCTACAGCGGTGGCGAG 32751 Query 2734 AACTCCGGTGTCGGTCTCGCGAACGGCCA-GACGCTCGAGCTGCTCAGTGT----GCAGG 2788 | || | | ||| | | ||| | ||||| || || ||| ||| ||||| Sbjct 32752 TCGGCGGGCCTGGCCCTCACCGAAGGCGAAGACGC-CG-GCA--TCA-TGTCGCCGCAGG 32806 Query 2789 GTGTGCTTCTCGATATTCAGCAGGCGATCGACTACCAGGACAAGCAGATCGCGCTGGCTG 2848 | || | || || || |||||||| ||||| ||| | ||||| ||||||| || Sbjct 32807 GCACGCCGATGGACCCTCGGCGCGCGATCGAGTACCACGACCACCAGATGGCGCTGGTTG 32866 Query 2849 GTCTGGCGCACTTCCTCAACCTCGACCGT---GGAGGGTCGCACGCGCTGGCCACGGTCC 2905 ||||||||||||| || || ||| | || || || | |||||||| | |||| Sbjct 32867 CGTTGGCGCACTTCCTGAATCTGGACGGCAAGGGCGGTTCCTATGCGCTGGCGAGCGTCC 32926 Query 2906 TGGAGGACCCGTTCACGCAGTCGGTTCAGACGCTCGCTGAAACCATCGCCGACATCGGCA 2965 || ||| ||||| |||||| || || ||| |||| || |||| ||| | | || Sbjct 32927 AGGCCGACACGTTCGTGCAGTCCGTGCAAACGGTCGCCGATGACATCCGCGATA-CAGCG 32985 Query 2966 CAG-CTCACGTCGTCGAGGACCTCGTTGACCTGAACTGGGGCGAGGACGAACCCGCCCCG 3024 ||| | ||| |||| || |||||||||||| | || | || ||||| |||||||| || Sbjct 32986 CAGGCCCACATCGTTGAAGACCTCGTTGACATCAATTTCGGTGAGGATGAACCCGCGCCC 33045 Query 3025 AAGCTCGTGTTCGACGAGATCGGATCCCGACAGGACCTCACCGCGGCCGCCATGAAGATG 3084 ||| || | ||| || || || ||||| |||||| |||||| || || || | ||| Sbjct 33046 TTGCTGGTATGCGATGAAATTGGCTCCCGCCAGGACGCCACCGCAGCGGCGCTGCAAATG 33105 Query 3085 CTCATCGACGCCGG 3098 ||| || |||| || Sbjct 33106 CTCGTCAACGCAGG 33119 >seq311842 Length=41669 Score = 181 bits (200), Expect = 3e-41 Identities = 287/407 (71%), Gaps = 6/407 (1%) Strand=Plus/Plus Query 39189 GAAATGGTGGTCTGACGATGGATCTCACAGAATCGATTGCACCGAGGTCTGACCAGCTCA 39248 ||||||| |||||| ||||| ||| || | || || |||| |||||||||| | | Sbjct 4690 GAAATGGATATCTGAC-ATGGACATCAGCGAGACCATCGCCCCGAAGTCTGACCAGTTGA 4748 Query 39249 ACGCAGAAGACCTCCTCAGCGGCCCTCGCACCGTCACGGTCGAGAAGGTCACCAAAGGCT 39308 |||| || || || ||| ||||| || || || || || || | |||| Sbjct 4749 ACGCCGAGGATCTGCTCGTTGGCCCGAAAACGGTGACCATCAAGGGTGTTTCACGAGGCG 4808 Query 39309 CAGCCGAGCAGCCGGTGAACGTCCACCTCGTCGAGTTCCCCGGCAGGC---CGTTCCGCC 39365 ||||| ||||| ||||| || ||| || |||||| | ||| ||||| | Sbjct 4809 ATGCCGACCAGCCTGTGAAGGTGGCCCTTGTTGAGTTCGGGGATGGGCGCCCGTTCAAGC 4868 Query 39366 CCAGCAAGACAGTGCGGCGCATCCTCGTCGCAGCGTGGGGCGCGGACGCGTCGGGCTACG 39425 | ||||| || |||| ||| || | ||||| |||||||| | ||||| ||| || Sbjct 4869 CGTGCAAGTCAATGCGCCGCGTCATGGTCGCCGCGTGGGGACCAGACGCATCGAAGTATC 4928 Query 39426 CGGGCCGACGGATGACCCTGTTCCGCGACCCCGCGGTCAGGTTCGGTGGCCAGGACGTCG 39485 ||||||||| |||||||||| | |||||||| | ||||||||||| |||||||| ||| Sbjct 4929 AGGGCCGACGCATGACCCTGTACTGCGACCCCACCGTCAGGTTCGGCGGCCAGGAAATCG 4988 Query 39486 GCGGAATCCGCGTCAGCCACCTCTCCCACATCGACAAGCGCCT-CCAGTTGGCGCTCACC 39544 |||| |||||| || |||| | | |||||||| ||| | ||| | ||||||||| Sbjct 4989 GCGGCATCCGCATCTCCCACATGAGCGACATCGACGGGCGGATGACAG-TCGCGCTCACC 5047 Query 39545 GTCACCCGCGGGAAGCGTGCGCCGTACATCGTGGAGCCGCTTCCCGC 39591 || ||||| || | ||| || |||| ||| || || || || || || Sbjct 5048 GTGACCCGGGGCAGGCGCGCACCGTTCATTGTTGACCCACTGCCGGC 5094 >seq234526 Length=1326 Score = 96.9 bits (106), Expect = 1e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 33752 GATCGCCGAGCTCGCCCCGAAGGCCGCGTACGTGGACGAGTTTGTTACCGACTCGGACCT 33811 |||||||| ||||||||||| || |||| | ||| |||| || ||||| |||||| Sbjct 177 GATCGCCGCCGACGCCCCGAAGGTCGGGTACATCGACCAGTTCGTCGCCGACGAGGACCT 118 Query 33812 TCTCAGCTTCCGCACCGTCGCCTCGACTCTCGGCGTTGCGGAGAATGAGCTGCGGAAGCT 33871 || | ||||||||||||| |||| |||||||| |||||| ||| || |||| Sbjct 117 ACTGAAACTCCGCACCGTCGCGTCGAACCTCGGCGTGCAGGAGAAGTGGCTCCGTGAGCT 58 Query 33872 GCTGATCACGAACAACTGGATCTACGTCGAGAC 33904 | ||||| || ||||||||||| ||||| Sbjct 57 GTTGATCGGCAAGCGGTGGATCTACGTGGAGAC 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157065539895552