Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_017973.1 Length=52474 Score E Sequences producing significant alignments: (Bits) Value seq103768 450 5e-122 seq311842 226 9e-55 seq353213 82.4 3e-11 >seq103768 Length=2474 Score = 450 bits (498), Expect = 5e-122 Identities = 411/515 (80%), Gaps = 14/515 (3%) Strand=Plus/Plus Query 4575 TGACCTTCACAGTCACCCGCGAGAGAGCGCAGTGGGTCCACGACATGGCCCGCGCTCGCG 4634 |||| ||||| |||||||| || | |||||| ||||||||| |||||||||| ||| Sbjct 1389 TGACGTTCACGGTCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCA 1448 Query 4635 ACGGTCTCCCCTACGCGTACGGCGGGGCGTTCACCAACAACCCGAGGGTGTCGACTGACT 4694 | || || |||||||| ||||| || ||||||||| | ||||| | |||||||| || | Sbjct 1449 AGGGCCTGCCCTACGCCTACGGTGGCGCGTTCACCCGCGACCCGCGCGTGTCGACCGATT 1508 Query 4695 GCTCTGGCCTGGTGCTGCAGACCGGGGCTTGGTATGGAGGTCGCACCGACTGGGTCGGAA 4754 |||| ||||||||||||||||||| ||| ||||| | || |||||||||||| ||||| Sbjct 1509 GCTCCGGCCTGGTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAA 1568 Query 4755 ACCGTTACGGCTCAACCGAATCGTTCCGGCTCGATCACAAGATCGTCTACGACCTAGGGT 4814 |||| |||||| |||||||||||||| || || || |||||||||||||||| |||| Sbjct 1569 ACCGCTACGGCAGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGT 1628 Query 4815 TCAAGCGGATGCCCCGAGGCGGGCCGGCAGCCTTGCCGATCAAGCCGGTCATGCTCGTCG 4874 ||||||| |||| ||||||| ||| || ||||| |||||||||| |||||||||| Sbjct 1629 TCAAGCGCCTGCCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCG 1688 Query 4875 GGCTCCAGCACGGCGGCGGCGGGGTCTACTCGCACACCGCCTGCACGCTGATGACGATGG 4934 |||| ||||||||||||||||| ||| |||||||||| || |||||||| |||||||||| Sbjct 1689 GGCTGCAGCACGGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGG 1748 Query 4935 ACCGCCCCGGTGGTCCGGT-GAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGGC 4993 || ||||| || ||||| | || ||| | || ||||||||||||||||||| || Sbjct 1749 ACGTTCCCGGCGGGCCGGTCGTCGA-GTCGGTGCGCGGCGTCGACTGGGAGTCCCGCG-- 1805 Query 4994 AATCGGAACGGCGTAGGCGTCGAACTTTACGAGGGCGCACGGGCATGGAATGACCGTCTG 5053 | ||||||| || | || ||||| ||||| || || ||||| || | ||| Sbjct 1806 ----GTGACGGCGT----GT--ATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTG 1855 Query 5054 TTCCACGACTTTTGGTACCTGGACGCAGTCCTCGA 5088 ||||||||||| |||||||| ||||| || ||||| Sbjct 1856 TTCCACGACTTCTGGTACCTCGACGCGGTTCTCGA 1890 >seq311842 Length=41669 Score = 226 bits (250), Expect = 9e-55 Identities = 318/440 (72%), Gaps = 6/440 (1%) Strand=Plus/Plus Query 4643 CCCTACGCGTACGGCGGGGCGTTCACCAACAACCCGAGGGTGTCGACTGACTGCTCTGGC 4702 || ||||| | ||| || ||||||| | | |||||| | || || |||||||| || Sbjct 34349 CCGTACGCATTCGGTGGCGCGTTCAGTACCGACCCGAAGCGCTCCACCGACTGCTCCGGG 34408 Query 4703 CTGGTGCTGCAGACCGGGGCT-TGGT-ATGGAGGTCGCACCGACTGGGTCGGAAACCGTT 4760 ||||| |||||||||| || || | |||| | |||||||||||| |||||||| | Sbjct 34409 CTGGTCTTGCAGACCGGCGCGCTGCTGATGG--GCCGCACCGACTGGTCGGGAAACCGCT 34466 Query 4761 ACGGCTCAACCGAATCGTTCCGGCTCGATCACAAGATCGTCTACGACCTAGGGTTCAAGC 4820 |||||||||| ||||||||||| || | || ||| |||| |||| | || ||||||| Sbjct 34467 ACGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTTCGACATCGGATTCAAGC 34526 Query 4821 GGATGCCCCGAGGCGGGCCGGCAGCCTTGCCGATCAAGCCGGTCATGCTCGTCGGGCTCC 4880 | | ||| ||||| ||| || | |||| ||||||||||||| || | Sbjct 34527 GCCTTCCCGCCAGCGGGGTCCAAGCGCTGGGTTTTGCGCCGATCATGCTCGTCGGACTGC 34586 Query 4881 AGCACGGCGGCGGCGGGGTCTACTCGCACACCGCCTGCACGCTGATG-ACGATGGACCGC 4939 |||||||||||||||| | ||| |||||||| ||||| ||| | ||| | || Sbjct 34587 AGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCTGTTCTACGCCG-ACGTT 34645 Query 4940 CCCGGTGGTCCGGTGAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGGCAATCGG 4999 || || ||| | | || ||| | || || ||||||||||| |||||| || || Sbjct 34646 CCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGGAGAGCCACGGAAACCGC 34705 Query 5000 AACGGCGTAGGCGTCGAACTTTACGAGGGCGCACGGGCATGGAATGACCGTCTGTTCCAC 5059 |||||||| || ||||| ||||| ||| || || ||||| |||| |||||||| Sbjct 34706 AACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGAACGACCCGCTGTTCCAA 34765 Query 5060 GACTTTTGGTACCTGGACGC 5079 ||||| |||||||||||||| Sbjct 34766 GACTTCTGGTACCTGGACGC 34785 >seq353213 Length=1209 Score = 82.4 bits (90), Expect = 3e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 4349 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTG 4406 ||||||||||||| |||||||||||||||||| |||| |||| ||||||||| ||||| Sbjct 447 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167083677878016