Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq271924 136 3e-27 seq337017 109 4e-19 seq126025 86.0 5e-12 >seq271924 Length=17277 Score = 136 bits (150), Expect = 3e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 ||||||| ||||||||||| | | |||||| |||| ||||| ||||| || ||||| | Sbjct 10568 CTTTTTGGATATTGTAATCTGAAAGCGTTCTGCCATCTTCCAACTGCTTCCCAGCAAAGA 10627 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | || ||||| |||||||| || || ||||| || |||||||| ||| ||| ||| ||| Sbjct 10628 TTAAGCGCTGCTGATCGGGAGGTATACCTTCCTTGTCTTGAATCTTTGCTTTGACATTTT 10687 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 ||| || || || | ||| ||||| | |||| ||||| || || | || || |||| Sbjct 10688 CTATTGTATCTGATGCTTCTACTTCTAATGTGATGGTTTTCCCCGTCAGGGTCTTCACAA 10747 Query 101460 ATATCTGCAT 101469 | || ||||| Sbjct 10748 AAATTTGCAT 10757 >seq337017 Length=19082 Score = 109 bits (120), Expect = 4e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| ||||| ||||| || | | ||| | |||| |||| ||||| || || || | Sbjct 18020 CTTTCTGTATGTTGTAGTCTGACAAAGTGCGACCATCCTCCAGCTGCTTCCCAGCGAAGA 18079 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | | ||||| || || || || || ||||| || || || || || ||||||| | | Sbjct 18080 TAAGTCGCTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGTATCTTGGCTTTTACATTCT 18139 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 ||| |||||| || | ||||| ||||| |||| || || || ||||| || || |||| Sbjct 18140 CTATAGTGTCTGAAGCCTCCACCTCAAGGGTGATTGTCTTACCAGTTAATGTCTTAACAA 18199 Query 101460 ATATCTGCAT 101469 |||||||||| Sbjct 18200 ATATCTGCAT 18209 >seq126025 Length=21299 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425 |||||||||||||| || || ||||||| |||| | |||||| || | ||||| ||| Sbjct 8979 CCTTCTTTATCTTGTATCTTGGCTTTTACATTTTCAATAGTGTCTGAAGCCTCCACCTCA 9038 Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || |||| || || || |||| || || ||||||||||||||| Sbjct 9039 AGGGTGATGGTCTTCCCCGTTAGGGTCTTCACAAATATCTGCATG 9083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394553792440416