Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq271924 111 1e-19 seq337017 91.5 1e-13 SEQ84474 86.0 5e-12 >seq271924 Length=17277 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 ||||||| ||||||||||| || || ||| | || ||||||||||| || ||||| | Sbjct 10568 CTTTTTGGATATTGTAATCTGAAAGCGTTCTGCCATCTTCCAACTGCTTCCCAGCAAAGA 10627 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | | ||||| ||||| | || | || |||||||| ||||||| ||| ||| Sbjct 10628 TTAAGCGCTGCTGATCGGGAGGTATACCTTCCTTGTCTTGAATCTTTGCTTTGACATTTT 10687 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | ||||| || || || || | || || ||||| ||||||| || || |||| Sbjct 10688 CTATTGTATCTGATGCTTCTACTTCTAATGTGATGGTTTTCCCCGTCAGGGTCTTCACAA 10747 Query 48757 AAATCTGCATCGTGTGTACGTGTA 48780 |||| |||||| |||| || |||| Sbjct 10748 AAATTTGCATCTTGTGAACTTGTA 10771 >seq337017 Length=19082 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| || || ||||| || || | | | ||| | || |||| |||||| || || || | Sbjct 18020 CTTTCTGTATGTTGTAGTCTGACAAAGTGCGACCATCCTCCAGCTGCTTCCCAGCGAAGA 18079 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | |||||||| || || | || | || |||||||| ||||| ||||||| Sbjct 18080 TAAGTCGCTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGTATCTTGGCTTTTACATTCT 18139 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | || ||||| ||||||||||| | || || || || || || || || || |||| Sbjct 18140 CTATAGTGTCTGAAGCCTCCACCTCAAGGGTGATTGTCTTACCAGTTAATGTCTTAACAA 18199 Query 48757 AAATCTGCAT 48766 | |||||||| Sbjct 18200 ATATCTGCAT 18209 >SEQ84474 Length=27182 Score = 86.0 bits (94), Expect = 5e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 9052 ACCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCC 9111 || || |||||| ||||| |||| || |||||||||||| ||||| || || || Sbjct 22843 ACTTCAACCAGTTCTGGATAGTAGATCCTTTGACAAATTAATTGTGCAATTCTATCACCT 22784 Query 9112 TTATTCACGACAAA-GTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCT 9170 | ||||| | || | || | || ||||||||||||| | |||||||| || || || Sbjct 22783 CTCTTCACCATGAATGGCTTT-TCCGAATGATTGAACAATAATACTCCCACATTGCCTCT 22725 Query 9171 GTAATCCTCATCGATCACACCAGC 9194 ||| ||||| || |||||||| || Sbjct 22724 GTAGTCCTCGTCTATCACACCGGC 22701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379279755755424