Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq356527 226 5e-54 SEQ78411 221 2e-52 seq112643 95.1 2e-14 >seq356527 Length=1012 Score = 226 bits (250), Expect = 5e-54 Identities = 645/975 (66%), Gaps = 21/975 (2%) Strand=Plus/Minus Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGG 221486 |||||||||| ||||| |||||| ||| || | ||||||||| || |||| Sbjct 962 CGTGGTAGATCGTCTCGAAGATCTGGGCGTTCAGGATGCGGGCCTCGGGGGACTCAAAGG 903 Query 221487 GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGT 221546 ||| || ||||| ||| ||||||| || ||||| || || | ||| || | || Sbjct 902 GCAGGCGGAGCATGAAGAAGGCGTCGGCGAGCCCCTGGACGCCCAGGGCGACCGGGCGGT 843 Query 221547 GTCTCCTGTTGGAAGCGGCCG--CTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATT 221604 | | ||| || ||||| | || || | ||||| || ||||| ||| || | | Sbjct 842 GGCGGAAGTTTGA-GCGGCGGGCCTCCTCG-ACGGGGTAGTAGTTGTTGTCAATGACGTA 785 Query 221605 GTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA 221664 ||||||||| || | ||| || ||||| ||| ||||||||| | |||| Sbjct 784 GTTGAGGTTGTAGGTCACGACCTTCACCACGTCGTGGAGCTTCTGGAAGTCGAACCAGGT 725 Query 221665 CTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724 || | ||||| |||||| | || | | | ||||| | |||||||| || Sbjct 724 CTGGGAGCCGT--TGGAGGCG----ACGTAGGTGGGCAGGGCCATCGACGCCAGGTTGCA 671 Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784 ||||| |||||||| | || |||| | |||||| |||||||||||| |||| Sbjct 670 GACGGCGACCTCGTCGGGGGCGGAGTACTCCACGATCTCGCAGCAGAGGTTGCTGGACTT 611 Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTT-GCGATTGGCAGCGTCCTTGTAGAGCATAA 221843 ||||| ||||||| || || || ||| ||| ||| | |||||||||||| || | Sbjct 610 GATGGCGCCCAGGTTCTTCTGGTTGCTCTTTGCG-TTGCACGAGTCCTTGTAGAGGATGA 552 Query 221844 AGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCA 221903 |||| |||||| ||| ||||||| | || | || |||||| | ||||| || Sbjct 551 AGGGCACGCCAGACTCGGTCTGAGCCTCGAGGACGGAGTGCCAGAGCT-TCTGGGCCTGG 493 Query 221904 CCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTT 221962 | || | | || |||||| || | | || |||||| | | |||| Sbjct 492 ATGGTCTTGCGGCCGCGGCCCTCGCGCTCGTAGCGCTCG---TAGAGCTGGACGAACTCG 436 Query 221963 TCACCGTACGCCTCGTCCAGGCCTGGACACCTG-GCGGGACACATCAGACTCCAGTGCTT 222021 || ||||| | ||| || || || ||| | ||||| |||||||| |||| Sbjct 435 TCGCCGTAGACGTCGGAGAGTCCCGGGCACTCGTGCGGG-CACATCAGGGTCCACACGCC 377 Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081 ||| || || || | || |||||||||||||||| |||| || || ||||| || | Sbjct 376 GTTCTCCTTCACGCGCTTCATGAAGAGGTCCGGGGTCCAGAGGGCGACGAAGAGGTCGCG 317 Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141 || || ||||||| ||||| ||| || | | || | || ||||| | ||| Sbjct 316 GGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGGACGTCGATGAAGTCAAAGACGTCGTA 257 Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 |||||| |||||||| || || || | ||||| || ||||||||||| ||||| || || Sbjct 256 GTGCCAGGGCTCCAGGTACACCGCGATGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCGAC 197 Query 222202 CATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261 | | | |||||||| ||| | |||| | | |||||||| ||||| Sbjct 196 GTAGCGCGCGGTGTTGTTGAAGACGCGCATCATCGGCAGGATCCCGTTGGAGGTGCCGTT 137 Query 222262 GGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGATACCAC 222320 ||| ||| ||||| | ||| |||| | ||| ||| | | ||||| || | Sbjct 136 GGTCCCCGCGATGTAGGAGCCGGTCGCCCGGATGTT-GTGGATGTTGAGCCCGATGCCGC 78 Query 222321 CGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGT 222380 |||| || ||||||| |||||| |||| || ||||| ||||||||| || |||| Sbjct 77 CGGCCGACTTGGAGATCAGCGCGCAGGTCTTCAGCGTGTCGTAGATGCCCTCGATGGAGT 18 Query 222381 CCTCCTTGACGTTCA 222395 ||||||| | || || Sbjct 17 CCTCCTTCATGTGCA 3 >SEQ78411 Length=2203 Score = 221 bits (244), Expect = 2e-52 Identities = 530/798 (66%), Gaps = 24/798 (3%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATC-CA 25570 |||||| ||||| ||||| || || | ||||||| | ||| |||| | | | | | || Sbjct 1416 CTGGACGGCCGAGGAGATCGACCTCGGCAAGGACCAGCACGACTGGGA-GAACAAGCTCA 1474 Query 25571 AAGACGAGCAGCATTTTCTCAAGTAC---GTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627 | ||| | ||| || ||| | ||| |||| ||||| || |||||||| || | Sbjct 1475 ACGACAACGAGCGGTTCTTCATTTCGCGGGTGCTGGCGTTCTTCGCTGCCTCTGACGGGA 1534 Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687 | ||||||||||| ||| ||| | ||| | || |||||| | |||||||||| Sbjct 1535 TCGTGAACGAGAACCTGGTGGAGCGGTTCTCTGCCGAGGTGCAGATCCCCGAGGCCAAGT 1594 Query 25688 GTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC 25747 | |||||||| |||||||| || || || | ||| ||| || | ||| | Sbjct 1595 GCTTCTACGGGTTCCAGATCATGATGGAGAACATCCACAGCGAGACCTACTC---GCTGC 1651 Query 25748 TGATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804 |||| || ||||| | ||| | ||| || || || ||||||||| Sbjct 1652 TGATCGACACCTACATCAAGGACCCCAAGGAGTCCGAGTTTCTCTTCAACGCCATCGAGA 1711 Query 25805 ACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG 25864 ||| || ||||| || |||||||| |||||| || |||||| | | || Sbjct 1712 CCATCCCGTGCATCCAGCAGAAGGCGCAGTGGGCGCTGCGCTGGATCCAGGACGAGGAGT 1771 Query 25865 CTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTT 25924 | || |||| |||||||||||| |||||||| | || ||||||||||| ||| || | Sbjct 1772 CGACCTTTGCCGAGCGGCTGGTGGCCTTTGCCGTCGTCGAGGGCATCTTCTTCTCGGGGT 1831 Query 25925 CGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCA 25984 | ||||| ||||||||||||| ||| || ||| |||||||| ||| ||| |||| Sbjct 1832 CCTTTGCCTCCATCTTCTGGCTTAAGAAGCGGGGCCTGATGCCCGGTCTGACCTTCTCCA 1891 Query 25985 ACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGG 26044 ||||||| ||| | |||||||| | |||| || ||||||||| | |||| | || Sbjct 1892 ACGAGCTGATCTCGCGCGACGAGGGAATGCACACGGACTTTGCCTGCATCCTCTTCTCG- 1950 Query 26045 GCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGG 26104 ||| | | ||| || || | |||| | || | | ||| | | ||||| |||| Sbjct 1951 --CACCTCCAGCACCGGCCCTCCAAGGAGATCATCGAGCGGATCGTGACGGAGGCGGTGG 2008 Query 26105 AGATCGAGAAGGAGT--TTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAA 26162 |||||| ||| || ||| ||||||||||| Sbjct 2009 CCATCGAGCAGGTGTACTTC--ACGGACTCGCTGCCGGTGTCGCTGCTGGGCATGAACTG 2066 Query 26163 CAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGAC 26221 || |||||| |||| ||| | |||| || || |||| ||||| ||| | ||| || | Sbjct 2067 CAAGCTCATGTGCCAGTACGTGGAGTTCGTTGCGGACCGCCTGCTGGTGGC-GCTCGGGC 2125 Query 26222 TCGCCAGACTCTACA--GTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGA 26279 || | |||||| || || |||||||||||||||||||| ||||| ||| | Sbjct 2126 TCAAGAAGATCTACAACGTGAGC--AACCCGTTCGACTTTATGGAGAACATCTCGCTCAG 2183 Query 26280 AGGGAAGACCAACTTCTT 26297 || |||||||||||||| Sbjct 2184 CGGCAAGACCAACTTCTT 2201 >seq112643 Length=20659 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| ||||| || ||||| | | ||| | ||| | || |||||| | ||| ||||| Sbjct 17170 GGGGCACATGAGGCTCCAATCTTCGTTCCTCTCGACACGCTCCATGAACAAGTCTGGGAT 17229 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||||| || | || || || | | |||| ||||||| || |||| || |||| Sbjct 17230 CCACATGGCATAGAACAGGTCCCGTGCCCGCAGCTCCTCTTTCCCAGTGTTCTTTTTCAG 17289 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 ||||| |||||||| | ||| || |||||||||||||| |||| ||| | || || || Sbjct 17290 GTCCAATAACTCAAACACGTCCGCATGCCACGGCTCCAGGTAGATGGCAAATGCTCCCGG 17349 Query 222178 TCGCT 222182 |||| Sbjct 17350 ACGCT 17354 Score = 87.8 bits (96), Expect = 3e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 221750 TACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTA 221809 |||| || ||||| || |||||||||||||| |||||||| ||||| | | || || Sbjct 6502 TACTCTAAAATCTCAGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGATTCTGCTGGTTG 6561 Query 221810 GACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTG 221865 |||||||| ||| || |||||||| ||||| |||| ||| ||||||| ||| Sbjct 6562 GACTTGCGGTTGCACGCATCCTTGTAAAGCATGTAGGGGGTGCCCGTCTCCACCTG 6617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 924698808350720