Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_019709.1 Length=41567 Score E Sequences producing significant alignments: (Bits) Value seq242644 212 2e-50 SEQ43426 98.7 3e-16 seq294323 93.3 1e-14 >seq242644 Length=1344 Score = 212 bits (234), Expect = 2e-50 Identities = 511/760 (67%), Gaps = 24/760 (3%) Strand=Plus/Minus Query 4381 CGTGATCTGCTGTCTCAGGGCCGCACTTCCAGTAACGCTC-TGGAATATGTGCGTGAAGA 4439 |||||| || || | || |||||||| ||| |||| | | |||| || |||||||| Sbjct 1288 CGTGATTTGATGGCACAAGGCCGCACCTCCCA-AACGACCATTGAATTCGTTCGTGAAGA 1230 Query 4440 GGTGTTTACCAATAACGCCGACGTGGTGGCAGAGAAAGCACTGAAGCCAGAATCGGATAT 4499 ||||| ||||||| ||| | || ||| || ||||| ||| || |||||| |||| Sbjct 1229 CGTGTTCACCAATAGCGCTAAAGTCGTGAAGGAAGGAGCACAGAAACCGGAATCGAATAT 1170 Query 4500 CACCTTCAGCAAAC---AAACCGCGAACGTGAAGACCATCGCGCACTGGGTGCAGG-CAT 4555 ||||||| ||| | | ||| | ||| || ||||||||| | ||| || Sbjct 1169 CACCTTCTCCAAGGCTGATGTCTCGACC---AAGGTTATTGCGCACTGGATCCAGCTCAC 1113 Query 4556 CACGTCAGGTGATGGATGATGCGCCAATGCTTCAGTCCTACATTAACAACCGCCTCATGT 4615 || |||| ||||| || ||||| |||||||| || || | ||| Sbjct 1112 CAAA-CAGGCAGCTTCCGATGCACCTATGCTCCAGTCCTATATCGGTGGACGTTTGCTGT 1054 Query 4616 ACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCTGAACGGCGACGGTACCGGGGATAACC 4675 |||| |||| || || || | ||| | ||||| || ||||||||||| ||||||| Sbjct 1053 ACGGTCTGGGTCTCGTTGAGGATGAGCAGTTCCTGAATGGTGACGGTACCGGCGATAACC 994 Query 4676 TGGAAGGGCTGAACAAAGTGGCAACCGCCTATGACACCTCGCTGAATGCCACCGGCGACA 4735 | | || | |||| || || || ||||| |||||| ||||| ||| || || || | Sbjct 993 TCGTGGGTATCAACACCGTAGCCACTGCCTACGACACCACGCTGGATGTCAAGGGAGATA 934 Query 4736 CCCGCGCTGACATTATCGCTCACGCTATTTATCAGGTGACCGAGTCTGAGTTCAGCGCTT 4795 | | |||| ||||||||||||| | ||||| ||||| ||||||| | ||| Sbjct 933 CTGCAGTGGACAAGCTCGCTCACGCTATCTTCCAGGTTACCGAATCTGAGTACTACGCCA 874 Query 4796 CCGGTATCGTCCTGAACCCGCGCGACTGGCACAACATCGCGTTGCTGAAAGACAATGAAG 4855 | || ||||| || || || || |||||||||| | || | |||| ||| ||||| Sbjct 873 CTGGCATCGTGCTCAATCCTCGTGACTGGCACACATTGGCACTCATGAAGGACGGTGAAG 814 Query 4856 GCCGCTATATCTTCGGTGGTCCTCAGGC-AT--TCACCAGTAACATCATGTGGGGCTTGC 4912 ||||||| ||| | || || || || || || | || | || | |||||||| ||| Sbjct 813 GCCGCTACATCCTTGGCGGCCCGCAAGCGATCGTTTCCCG---CACCCTGTGGGGCCTGC 757 Query 4913 CAGTGGTTCCGACTAAGGCG---CAGGCCGTCGGCACCTTTACCGTAGGCGGTTTCGATA 4969 | || || ||||| || ||||| | || |||| || |||| ||| | Sbjct 756 CTGTTGT---GACTACCCCGCGTCAGGCGAAGGATACGTTTAGTGTGGGCGCGTTCTCTC 700 Query 4970 TGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGAAGTTAGCCG-TGAAGACCGC 5028 ||||||| ||||| ||||||| | ||| | | | | | ||| | | ||||| Sbjct 699 TGGCCTCTCAGGTTTGGGATCAGTGGTCTGCAAGCAT-CACCACATCCGATCAGGACCGT 641 Query 5029 GATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAGCGTCTGGCGCTGGCGCAT 5088 || ||||||||||| |||||||| || || || ||||| ||||| || | || || Sbjct 640 GACAACTTCGTGAAGAACATGCTCACGATTCTCGCGGAAGAACGTCTTGCAATTGCCCAC 581 Query 5089 TATCGCCCGACAGCAATCATCAAGGGCACCTTCTCTGCTG 5128 || ||||||| ||| | | || ||||| ||| ||||| Sbjct 580 TACCGCCCGAAAGCGCTGGTTAAAGGCACTTTCAGTGCTG 541 >SEQ43426 Length=1012 Score = 98.7 bits (108), Expect = 3e-16 Identities = 159/224 (71%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 25389 AATCTTATTTTGAATTACTGCTGCTCGTTCATTCAGTGACTTTGCCTC-TTCCTTGAGGC 25447 |||||| |||| | ||| | |||| ||| |||||||||| || ||||| | || Sbjct 8 AATCTTGTTTTCGACTACCGACGCTCTTTCCAGTAGTGACTTTGATTCATTCCTCAAAGC 67 Query 25448 GTTCAGCATAACCAGAT--TCATTTTTAATAATGGCAAGAAGTTGCTCTACTTTATCGGT 25505 | ||||||| || | || ||||| |||| ||| | ||||| || ||||| Sbjct 68 CT-CAGCATAG--AGTTGCTCGTTTTTGCAGATGGAAAGCAACTGCTCGACCTTATCAAC 124 Query 25506 AAATTCTCCTTCCATGCCTTCTATTGTGTCAGCAATCATCTCTGGTTCTAAATCTGAATC 25565 | || || || || ||||| || ||||| || ||||||||||| |||||| | ||||| Sbjct 125 CAGCTCGCCATCAATTCCTTCGATAGTGTCGGCGATCATCTCTGGATCTAAACCAGAATC 184 Query 25566 CATCAATTTTGCGTATTCATTGGCAATTTCATACAGTTTGCTCA 25609 ||| | || ||||| |||||||| || || || | ||||||| Sbjct 185 CATGAGCTTCGCGTAATCATTGGCGATGTCGTATATCTTGCTCA 228 >seq294323 Length=2603 Score = 93.3 bits (102), Expect = 1e-14 Identities = 120/153 (78%), Gaps = 12/153 (8%) Strand=Plus/Minus Query 38896 TTTTTTATGTCCGCAGTAAACCGCGCATTCTCGTGCGCATATCAACCAAGAGCTTTTCGG 38955 ||||||||| ||| | | |||||||||||| ||||| |||| |||||||| |||||| Sbjct 2213 TTTTTTATGCCCGTAACAC-CCGCGCATTCTCC-GCGCAAATCA-CCAAGAGCCTTTCGG 2157 Query 38956 GATATGAGACAGAGACAGGACGGTGGCTTACATCG-TG-CCGCTCTTGGGCTGTCCATGT 39013 | || ||| |||| ||| | |||| | |||| || |||||||||||||| | | | Sbjct 2156 GGTA-GAGCTTGAGATAGGGCAGTGGTT---ATCGCTGACCGCTCTTGGGCTGCCTACAT 2101 Query 39014 CTGCGAGAACTGGCTCATATCACCAAAAAGGTA 39046 ||| |||||| ||||| ||||||| |||||||| Sbjct 2100 CTG-GAGAACAGGCTC-TATCACC-AAAAGGTA 2071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132329278713024