Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq242644 212 2e-50 seq210807 98.7 3e-16 SEQ52670 98.7 3e-16 SEQ43426 89.7 1e-13 >seq242644 Length=1344 Score = 212 bits (234), Expect = 2e-50 Identities = 507/753 (67%), Gaps = 24/753 (3%) Strand=Plus/Minus Query 4474 CGTGATCTGCTGGCTCAGGGCCGCACTTCCAGTAACGCTC-TGGAATATGTGCGTGAAGA 4532 |||||| || |||| || |||||||| ||| |||| | | |||| || |||||||| Sbjct 1288 CGTGATTTGATGGCACAAGGCCGCACCTCCCA-AACGACCATTGAATTCGTTCGTGAAGA 1230 Query 4533 GGTGTTTACCAATAACGCCGACGTGGTGGCAGAGAAAGCACTGAAGCCAGAATCGGATAT 4592 ||||| ||||||| ||| | || ||| || ||||| ||| || |||||| |||| Sbjct 1229 CGTGTTCACCAATAGCGCTAAAGTCGTGAAGGAAGGAGCACAGAAACCGGAATCGAATAT 1170 Query 4593 CACCTTCAGCAAAC---AAACCGCGAACGTGAAGACCATCGCGCACTGGGTGCAGG-CAT 4648 ||||||| ||| | | ||| | ||| || ||||||||| | ||| || Sbjct 1169 CACCTTCTCCAAGGCTGATGTCTCGACC---AAGGTTATTGCGCACTGGATCCAGCTCAC 1113 Query 4649 CACGTCAGGTGATGGATGATGCGCCAATGCTTCAGTCCTACATTAACAACCGCCTCATGT 4708 || |||| ||||| || ||||| |||||||| || || | ||| Sbjct 1112 CAAA-CAGGCAGCTTCCGATGCACCTATGCTCCAGTCCTATATCGGTGGACGTTTGCTGT 1054 Query 4709 ACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCTGAACGGCGACGGTACCGGGGATAACC 4768 |||| |||| || || || | ||| | ||||| || ||||||||||| ||||||| Sbjct 1053 ACGGTCTGGGTCTCGTTGAGGATGAGCAGTTCCTGAATGGTGACGGTACCGGCGATAACC 994 Query 4769 TGGAAGGGCTGAACAAAGTGGCAACCGCCTATGACACCTCGCTGAATGCCACCGGCGACA 4828 | | || | |||| || || || ||||| |||||| ||||| ||| || || || | Sbjct 993 TCGTGGGTATCAACACCGTAGCCACTGCCTACGACACCACGCTGGATGTCAAGGGAGATA 934 Query 4829 CCCGCGCTGACATTATCGCTCACGCTATTTATCAGGTGACCGAGTCTGAGTTCAGCGCTT 4888 | | |||| ||||||||||||| | ||||| ||||| ||||||| | ||| Sbjct 933 CTGCAGTGGACAAGCTCGCTCACGCTATCTTCCAGGTTACCGAATCTGAGTACTACGCCA 874 Query 4889 CCGGTATCGTCCTGAACCCGCGCGACTGGCACAACATCGCGTTGCTGAAAGACAATGAAG 4948 | || ||||| || || || || |||||||||| | || | |||| ||| ||||| Sbjct 873 CTGGCATCGTGCTCAATCCTCGTGACTGGCACACATTGGCACTCATGAAGGACGGTGAAG 814 Query 4949 GCCGCTATATCTTCGGTGGTCCTCAGGC-AT--TCACCAGTAACATCATGTGGGGCTTGC 5005 ||||||| ||| | || || || || || || | || | || | |||||||| ||| Sbjct 813 GCCGCTACATCCTTGGCGGCCCGCAAGCGATCGTTTCCCG---CACCCTGTGGGGCCTGC 757 Query 5006 CAGTGGTTCCGACTAAGGCG---CAGGCCGCCGGCACCTTTACCGTAGGCGGTTTCGATA 5062 | || || ||||| || ||||| | || |||| || |||| ||| | Sbjct 756 CTGTTGT---GACTACCCCGCGTCAGGCGAAGGATACGTTTAGTGTGGGCGCGTTCTCTC 700 Query 5063 TGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGAAGTTAGCCG-TGAAGACCGC 5121 ||||||| ||||| ||||||| | ||| | | | | | ||| | | ||||| Sbjct 699 TGGCCTCTCAGGTTTGGGATCAGTGGTCTGCAAGCAT-CACCACATCCGATCAGGACCGT 641 Query 5122 GATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAGCGTCTGGCGCTGGCGCAT 5181 || ||||||||||| |||||||| || || || ||||| ||||| || | || || Sbjct 640 GACAACTTCGTGAAGAACATGCTCACGATTCTCGCGGAAGAACGTCTTGCAATTGCCCAC 581 Query 5182 TATCGCCCGACAGCAATCATCAAGGGCACCTTC 5214 || ||||||| ||| | | || ||||| ||| Sbjct 580 TACCGCCCGAAAGCGCTGGTTAAAGGCACTTTC 548 >seq210807 Length=3864 Score = 98.7 bits (108), Expect = 3e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 8021 GCAGGGCGTATCGCCGCATCCATCTGCGATGAACATGGTAAACCCATCTTCACCCCGGCT 8080 || ||||| || || | || ||||| ||||| | |||||| |||||||| || |||| Sbjct 3311 GCTGGGCGCATAGCATCGTCTATCTGTGATGACCGTGGTAATCCCATCTTTACTCCGGGA 3252 Query 8081 GACATTACTGGTGAGGCAGATCCTGAACGTGGTGCACTGGATGGCGGCCTGACGGTAGCA 8140 |||||||| || ||||||||||| |||||||| |||||||| | |||||| || | Sbjct 3251 GACATTACGGGCGAGGCAGATCCAGAACGTGGCGCACTGGACTACAACCTGACAGTTGAG 3192 Query 8141 CTGCTTC 8147 || |||| Sbjct 3191 CTCCTTC 3185 >SEQ52670 Length=2267 Score = 98.7 bits (108), Expect = 3e-16 Identities = 176/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 30876 TCGATTATCAGCTTCTTGAATGTTGCTTCGTTAGAGTCAGAAAGTTTTGCTATGACCAAG 30935 || || | |||||| |||||||| ||||| || | || | || || || | |||| | Sbjct 26 TCAATGACCAGCTTTTTGAATGTGGCTTCATTCGCATCTGTGAGCTTCGCCACTACCAGG 85 Query 30936 CTGCCGTTGACCGCCTCCCTTCCGGTATCGAAAAGAACGAATGTTCCCTCTGGAATGCTT 30995 ||||| || || ||| || |||||||||| |||| | | || || ||||| ||| Sbjct 86 CTGCCATTTTTCGGCTCTCTACCGGTATCGACCAGAATCATCATCCCTTCAGGAATACTT 145 Query 30996 AACCCAACCGGTGCCGTCATTGAATCACCTTCCACTTTAAGCCAGAACGCATTACCTTGA 31055 || || | ||||| ||||| |||| ||| ||||||||| |||| ||| | | Sbjct 146 TGGCCGTAGGGCGATGTCATGGAATCGCCTTTTACTCGAAGCCAGAAAGCATCACCCTCA 205 Query 31056 ATATGCGCGTCAGACTCAAGCCAAACATCTATGTCTTTAATGGTGTATGGTTCGCATGCT 31115 | ||| || | ||||||| || | | ||| || | | |||||||| || ||| Sbjct 206 ACATGAGCATTAGACTCATACCGATCTAGTATCTCGCTTAACGTGTATGGCTCTATGGCT 265 Query 31116 TCACACCACGAGCCAGC 31132 |||||||| | ||||| Sbjct 266 TCACACCAAGCTCCAGC 282 >SEQ43426 Length=1012 Score = 89.7 bits (98), Expect = 1e-13 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 26621 AATCTTATTTTGAATTACTGCTGCTCGTTCATTCAGTGACTTTGCCTC-TTCCTTGAGGC 26679 |||||| |||| | ||| | |||| ||| |||||||||| || ||||| | || Sbjct 8 AATCTTGTTTTCGACTACCGACGCTCTTTCCAGTAGTGACTTTGATTCATTCCTCAAAGC 67 Query 26680 GTTCAGCATAACCAGAT--TCATTTTTAATAATGGCGAGAAGTTGTTCTATTTTATCGGT 26737 | ||||||| || | || ||||| |||| || | || || | ||||| Sbjct 68 CT-CAGCATAG--AGTTGCTCGTTTTTGCAGATGGAAAGCAACTGCTCGACCTTATCAAC 124 Query 26738 AAATTCTCCTTCCATGCCTTCTATTGTGTCAGCAATCATCTCTGGCTCTAAATCTGAATC 26797 | || || || || ||||| || ||||| || ||||||||||| |||||| | ||||| Sbjct 125 CAGCTCGCCATCAATTCCTTCGATAGTGTCGGCGATCATCTCTGGATCTAAACCAGAATC 184 Query 26798 CATCAATTTTGCGTATTCATTGGCTATTTCATATAGTTTGCTCA 26841 ||| | || ||||| |||||||| || || |||| ||||||| Sbjct 185 CATGAGCTTCGCGTAATCATTGGCGATGTCGTATATCTTGCTCA 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129598507640832