Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq233602 275 2e-69 seq194631 230 7e-56 SEQ87507 147 7e-31 SEQ52670 104 7e-18 >seq233602 Length=4279 Score = 275 bits (304), Expect = 2e-69 Identities = 267/341 (78%), Gaps = 2/341 (1%) Strand=Plus/Plus Query 38871 CTTTACATCGACGACACGCCGGGATTATCTCTGGCTCAAATCGTCAGCGAAAGCCGTCGA 38930 || |||||||| ||||| || || ||||||||||||| |||||| || ||||| | Sbjct 570 CTCTACATCGATGACACCCCAGGGCTATCTCTGGCTCATATCGTCGCAGAGAGCCGCAGG 629 Query 38931 ATCAAGCGAGAAAAAGGATGTGTTGGCATGATTCTGGTCGATTACCTGACACTAATGACC 38990 || ||||| || ||| | || || |||||||| || || |||||||| || |||| Sbjct 630 ATTAAGCGTGAGCGCGGAAGCGTAGGGATGATTCTCGTTGACTACCTGACGCTGATGAAA 689 Query 38991 GCTGAAAAGGCCGATCGCAACGACCTTGCTTACGGCATGATCACCAAAGGACTGAAGAAC 39050 || || ||||| || || ||||| || || |||||||||||||||||||| || |||||| Sbjct 690 GCCGAGAAGGCAGAGCGTAACGATCTGGCATACGGCATGATCACCAAAGGGCTAAAGAAC 749 Query 39051 CTTGCCAAAGAGCTTGATTGCGTTGTTGTGCTTCTGACGCAGCTTAACCGCG-CATTGGA 39109 || || |||||||| | |||||||| || || || || ||||||||||||| | ||| Sbjct 750 CTCGCTAAAGAGCTGAACTGCGTTGTCGTTCTGCTTACCCAGCTTAACCGCGACCTTGAG 809 Query 39110 AAGCAGAACCAATAAACGCCCATTACCAAGTGACTCACGAGATACAGGGCAGATTGAACA 39169 |||| ||||||| |||||||| | ||||||||||| || ||||| ||||| || || || Sbjct 810 AAGC-GAACCAACAAACGCCCGCTGCCAAGTGACTCCCGCGATACCGGGCAAATCGAGCA 868 Query 39170 GGATTGCGATTATTGGGTGGGGATCCATCGTGAAGGCGCTT 39210 |||||||||||| ||| |||| || |||| || || |||| Sbjct 869 GGATTGCGATTACTGGCTGGGAATTTATCGAGAGGGAGCTT 909 Score = 102 bits (112), Expect = 2e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 38532 ACAGGGATCCCATCGCTGGACAGGATGCTGTCACCGAAAGGTCTGGTGAAAGGTTCTCTG 38591 |||||||| ||||||||||| |||| | ||||||||| ||||||| || || | Sbjct 261 ACAGGGATTCCATCGCTGGATGAATTGCTCGCTCCGAAAGGTTTGGTGAATGGATCGTTA 320 Query 38592 TTTGTCATTGGCGCTCGCCCTAAGATGGGGAAAACGACGCTATACAGCCAGATGGCAATC 38651 || || | ||||| || || |||||||| || || ||||| |||| | ||||| | Sbjct 321 TTCGTTGTCGGCGCGCGGCCAAAGATGGGCAAGACCACGCTTTACATGAAAATGGCCTTG 380 Query 38652 AACTGCGCAGTGCATGAGAAAAAGCCCGCTCTGATGTTCAGCCTTGAAATGCCA 38705 | |||||| || | ||||| ||||| || | || ||||||||||||||| Sbjct 381 CATTGCGCACTGGAAGAGAACAAGCCGGCAATCGCCTTTAGCCTTGAAATGCCA 434 >seq194631 Length=1002 Score = 230 bits (254), Expect = 7e-56 Identities = 270/365 (74%), Gaps = 0/365 (0%) Strand=Plus/Minus Query 37598 GAGAGTGCCACAGTAGACAAAAAGTCTGACAAGAAAAAACCTTCCGTTAGCTGTCAGGAT 37657 |||||||| ||| | |||| || || ||| |||||||| | | ||||| || Sbjct 367 GAGAGTGCATCAGCCAGCGAAAAATCAGAAAAGCAAAAACCTGCAATCTCATGTCAAGAC 308 Query 37658 GTTGTCGATGCTTACCACGAAATCCTTCCTGAAGCGCCAAAAATCCGCGCACTGAATGAC 37717 || |||| || || ||||||||||| || |||||| | || | ||||| | || Sbjct 307 GTCATCGACGCCTATCACGAAATCCTGCCAGAAGCGAAATCGGTCAGAGCACTAACCGAG 248 Query 37718 AAGCGTAAAAACCAGATCCGAACGTTCTGGCGCAAAGCCGGAGTGATAACCCGCCAGCTT 37777 |||||| | | ||| ||| |||||||| |||||||| ||| | || || ||||| Sbjct 247 AAGCGTCGCAGCTCGATTAAAACCTTCTGGCGAAAAGCCGGGGTGGTTACTCGTCAGCTG 188 Query 37778 GACGGGCATGGGTTCACGATGCAGGACTGGAGAAATTATTTGATCTACGTAGGCGAAAAT 37837 || || ||||||||||||||| | |||||| | || ||| || |||||| | || || Sbjct 187 GATGGTCATGGGTTCACGATGGAAGACTGGCGGAAATATCTGGGCTACGTTCGTGACAAC 128 Query 37838 TGCCGATGGATGTTCGAAGAACGCCCAAACCATCAACGCGGAACCGTCTGGCACAAAAAG 37897 ||||| |||||||||||||| || | |||| || ||||| || || |||||||| ||| Sbjct 127 TGCCGCTGGATGTTCGAAGAGCGTCAGAACCTGCAGCGCGGGACTGTTTGGCACAAGAAG 68 Query 37898 GGATTTGATTTCCTGCTTAACGACAATACCTACCTGAAAGTTCGTGAGGGTGAACACGAT 37957 ||||| || |||||||| ||||||||| || || |||||||||||||| || || || Sbjct 67 GGATTCGACTTCCTGCTGAACGACAATGTTTATCTCAAAGTTCGTGAGGGCGATCATGAC 8 Query 37958 GACCG 37962 ||||| Sbjct 7 GACCG 3 Score = 82.4 bits (90), Expect = 2e-11 Identities = 119/167 (71%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 37131 GCAGC-GGTAAGGGGTATGCCTTGCTGCACCGTAAAATTATGGATGTGCCGTTTTACAAG 37189 ||||| |||||||||| ||||||| | || ||| || | |||||| | | |||||| Sbjct 835 GCAGCCGGTAAGGGGTTTGCCTTGATTCATCGTCAATTCATGGATAGCAAGCTGTACAAG 776 Query 37190 GACGCAGAAGCAGCGCATCTGTGGGTTCACTTAATTCTCAAAGCAAAGCATACGCCTGAG 37249 ||| | | |||| || || ||| ||||| | || || ||||| || | |||| | | Sbjct 775 GACTCTCAGGCAGTACACCTATGGCTTCACCTGATACTGAAAGCCAACTACTCGCCAGCG 716 Query 37250 TATGTAATGACTGACGCAGGAGAAATTCTGGTAGGCAGAGGGAAGCT 37296 ||| | || |||| ||| ||||| |||| || |||||| |||| Sbjct 715 GTTGTGAAAACCGACGTAGGGGAAATGATGGTCGGAAGAGGGCAGCT 669 >SEQ87507 Length=1945 Score = 147 bits (162), Expect = 7e-31 Identities = 190/262 (73%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 44856 AATTATTGTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAA 44915 ||| ||| ||||||||| || || ||||| |||||| || ||||| || || | ||| Sbjct 1290 AATGATTATGAGCAATATACGCGAGCTTCACGCGGAGCGTAGATGCCAAAGGTCACAAAT 1231 Query 44916 CCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCG 44975 || ||||| ||||| ||||| |||||||| |||||| ||||| || || || || Sbjct 1230 CCAAGCAACCCATTAACGAAGGTTTGCTGTACTTCTGTACGGACAACTTTGTCAGCTCCA 1171 Query 44976 CCACAAATTTTGGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGA 45035 ||||||| ||| ||||| | |||||||||||| ||||| || | || ||||| || Sbjct 1170 CCACAAACAGCGGCAGCATCAATAGTTTTCTTCTGACCAATACCGGCCACAAAGAAGTGG 1111 Query 45036 TGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGT 45095 || || || | | ||||||| ||| ||| | | |||| ||| |||| || || Sbjct 1110 TGAGTAGTGATCTGTTTTGGTGTTACCGCTAC---GTCATTTTTTACAATAAATGTTTGC 1054 Query 45096 TGAGCACATCCTGTAATAAGCA 45117 |||||||| || |||| || || Sbjct 1053 TGAGCACAGCCAGTAACAACCA 1032 >SEQ52670 Length=2267 Score = 104 bits (114), Expect = 7e-18 Identities = 177/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 35601 TCGATTATCAGCTTCTTGAATGTTGCTTCGTTAGAGTCAGAAAGTTTTGCTATGACCAAG 35660 || || | |||||| |||||||| ||||| || | || | || || || | |||| | Sbjct 26 TCAATGACCAGCTTTTTGAATGTGGCTTCATTCGCATCTGTGAGCTTCGCCACTACCAGG 85 Query 35661 CTGCCGTTGATCGCCTCCCTTCCGGTATCGAAAAGAACGAATGTTCCCTCTGGAATGCTT 35720 ||||| || ||| ||| || |||||||||| |||| | | || || ||||| ||| Sbjct 86 CTGCCATTTTTCGGCTCTCTACCGGTATCGACCAGAATCATCATCCCTTCAGGAATACTT 145 Query 35721 AACCCAACCGGTGCCGTCATTGAATCACCTTCCACTTTAAGCCAGAACGCATTACCTTGA 35780 || || | ||||| ||||| |||| ||| ||||||||| |||| ||| | | Sbjct 146 TGGCCGTAGGGCGATGTCATGGAATCGCCTTTTACTCGAAGCCAGAAAGCATCACCCTCA 205 Query 35781 ATATGCGCGTCAGACTCAAGCCAAACATCTATGTCTTTAATGGTGTATGGTTCGCATGCT 35840 | ||| || | ||||||| || | | ||| || | | |||||||| || ||| Sbjct 206 ACATGAGCATTAGACTCATACCGATCTAGTATCTCGCTTAACGTGTATGGCTCTATGGCT 265 Query 35841 TCACACCACGAGCCAGC 35857 |||||||| | ||||| Sbjct 266 TCACACCAAGCTCCAGC 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149927935226112