Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_020876.1 Length=53028 Score E Sequences producing significant alignments: (Bits) Value seq103768 479 1e-130 seq311842 311 3e-80 >seq103768 Length=2474 Score = 479 bits (530), Expect = 1e-130 Identities = 413/505 (82%), Gaps = 16/505 (3%) Strand=Plus/Plus Query 4703 TCACCCGCAAGCAGGCTCAGTGGGTCCACGACATGGCCCGCGCCCGGAACGGTCTCCCGT 4762 ||||||| ||| ||| ||| ||||||||| |||||||||| || || || || || | Sbjct 1401 TCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCAAGGGCCTGCCCT 1460 Query 4763 ACGCCTACGGCGGCGCGTTCACCAACGACCCGAAGCG-ATCGACCGACTGCTCTGGCCTG 4821 |||||||||| |||||||||||| ||||||| ||| |||||||| ||||| |||||| Sbjct 1461 ACGCCTACGGTGGCGCGTTCACCCGCGACCCG-CGCGTGTCGACCGATTGCTCCGGCCTG 1519 Query 4822 GTGCTGCAAACCGCAGCCTGGTACATGGGCCGCACCGACTGGGTCGGTAACCGCTACGGC 4881 |||||||| ||||| |||||||||| |||||||||||||||| ||| |||||||||||| Sbjct 1520 GTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAAACCGCTACGGC 1579 Query 4882 TCCACCGAGAGCTTCCGGCTCGACCACAAGATCGTCTACGACCTGGGCTTCCGGCGCATG 4941 |||||| ||||| || ||| || |||||||||||||||| || ||| |||| || Sbjct 1580 AGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGTTCAAGCGCCTG 1639 Query 4942 CCTCCGGGCGGGCCAGCGGCCCTGCCGTTCAAGCCGGTCATGCTCGTCGGCCTGCAGCAC 5001 || ||||||||| || || ||||||||||||||||| ||||||||||| ||||||||| Sbjct 1640 CCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCGGGCTGCAGCAC 1699 Query 5002 GGCGGCGGCGGGGAGAACTCGCACACCGCCTGCACGCTGATGACGATGGACATCCCCGGT 5061 ||||||||||| | ||||||||||| || |||||||| |||||||||||| | ||||| Sbjct 1700 GGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGGACGTTCCCGGC 1759 Query 5062 GGCCCGGT-GAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGGGAACCGCAACGG 5120 || ||||| | || ||| | || ||||||||||||||||||| || | |||| Sbjct 1760 GGGCCGGTCGTCGA-GTCGGTGCGCGGCGTCGACTGGGAGTCCCGCG------GTGACGG 1812 Query 5121 CGTCGNCGTCGATCTCTACGACAACGCACGCGCCTGGAACGATCCGCTGTTCCACGACTT 5180 ||| || |||| |||||| ||| |||||||||||||||||||||||||||||||| Sbjct 1813 CGT----GT--ATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGTTCCACGACTT 1866 Query 5181 CTGGTACCTCGACGCGAAGCTCGAG 5205 |||||||||||||||| |||||| Sbjct 1867 CTGGTACCTCGACGCGGTTCTCGAG 1891 >seq311842 Length=41669 Score = 311 bits (344), Expect = 3e-80 Identities = 343/450 (76%), Gaps = 8/450 (2%) Strand=Plus/Plus Query 4759 CCGTACGCCTACGGCGGCGCGTTCACCAACGACCCGAAGCGATCGACCGACTGCTCTGGC 4818 |||||||| | ||| |||||||||| | |||||||||||| || ||||||||||| || Sbjct 34349 CCGTACGCATTCGGTGGCGCGTTCAGTACCGACCCGAAGCGCTCCACCGACTGCTCCGGG 34408 Query 4819 CTGGTGCTGCAAACCGCAGC-CTGGTACATGGGCCGCACCGACTGGGTCGGTAACCGCTA 4877 ||||| |||| |||| || ||| | |||||||||||||||||| || |||||||| Sbjct 34409 CTGGTCTTGCAGACCGGCGCGCTGCTG-ATGGGCCGCACCGACTGGTCGGGAAACCGCTA 34467 Query 4878 CGGCTCCACCGAGAGCTTCCGGCTCGACCACAAGATCGTCTACGACCTGGGCTTCCGGCG 4937 |||||| || || ||||| || || || ||| |||| |||| | || ||| ||| Sbjct 34468 CGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTTCGACATCGGATTCAAGCG 34527 Query 4938 CATGCCTCCGGGCGGG--CCAGCGGCCCTGCCGTTCAAGCCGGTCATGCTCGTCGGCCTG 4995 | | || | ||||| ||| || ||| || |||| ||||||||||||| ||| Sbjct 34528 CCTTCCCGCCAGCGGGGTCCAA--GCGCTGGGTTTTGCGCCGATCATGCTCGTCGGACTG 34585 Query 4996 CAGCACGGCGGCGGCGGGGAGAACTCGCACACCGCCTGCACGCTGATG-ACGATGGACAT 5054 ||||||||||||||||| || || |||||||| ||||| ||| | ||| | || | Sbjct 34586 CAGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCTGTTCTACGCCG-ACGT 34644 Query 5055 CCCCGGTGGCCCGGTGAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGGGAACCG 5114 || || || | | || ||| | || || ||||||||||| |||||| ||||| Sbjct 34645 TCCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGGAGAGCCACGGAAACCG 34704 Query 5115 CAACGGCGTCGNCGTCGATCTCTACGACAACGCACGCGCCTGGAACGATCCGCTGTTCCA 5174 ||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct 34705 CAACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGAACGACCCGCTGTTCCA 34764 Query 5175 CGACTTCTGGTACCTCGACGCGAAGCTCGA 5204 |||||||||||||| ||||| |||||||| Sbjct 34765 AGACTTCTGGTACCTGGACGCCAAGCTCGA 34794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168848960461440