Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq310633 190 5e-44 SEQ40258 87.8 5e-13 SEQ70014 84.2 6e-12 >seq310633 Length=10544 Score = 190 bits (210), Expect = 5e-44 Identities = 138/160 (86%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 18569 TATGAATCGCCACAGATAATCTAGACACTTCCGAGCCGCTGATAATATTGGTTTTCGTAT 18628 ||||||||||||| |||||||||||||||| ||||||| |||||||| | | |||| ||| Sbjct 4246 TATGAATCGCCACGGATAATCTAGACACTTTCGAGCCGTTGATAATACTAGCTTTCATAT 4187 Query 18629 TCAGTTGGTGGCATATGATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCG 18688 ||| |||| ||| ||||| || ||||||||||||||| ||| |||||||||||||||| Sbjct 4186 TCATCCGGTGACATCTGATCGCTAGAACCATGCCGACGCCTACAGTTATAAAACATTTCG 4127 Query 18689 ATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTC 18728 ||||||||||||| ||| | ||| | |||||| ||||||| Sbjct 4126 ATGTAATCAAAAACATCGCTGCGGGTTTCTTCCCGCGTTC 4087 Score = 80.6 bits (88), Expect = 7e-11 Identities = 99/131 (76%), Gaps = 6/131 (5%) Strand=Plus/Plus Query 18917 TTACGTCGCCACACGGCCATCAGAAGTGCATT-CAGGACAATATCCTTTGTCATCCGGGG 18975 || || ||||||| |||||| | || |||| |||| || | | | ||||| || | Sbjct 9293 TTTCGCCGCCACAGCGCCATCTGCAGCGCATCGCAGGCCAGT-TGCGCCGTCATTCGTGA 9351 Query 18976 CTGCATTGACCAGCCAATAACTTTGCGCGAGA--ACAGGTCAACAACCACAGCCAGATAC 19033 ||| |||||||||||||| || ||||| ||||||||| ||||| ||||||||| Sbjct 9352 TGACATCGACCAGCCAATAAC--GGCACGAGACCACAGGTCAATGACCACCGCCAGATAC 9409 Query 19034 AGCCAGCCTTC 19044 ||||||||||| Sbjct 9410 AGCCAGCCTTC 9420 >SEQ40258 Length=3107 Score = 87.8 bits (96), Expect = 5e-13 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 25592 TTCAGTGGTGCGGGAATGTCCTGGCAATACGCTTCTGTTGCATCATGCATTAACGCTTCA 25651 || || ||||| | || ||| | ||| ||||| | ||||||||||| | |||||| Sbjct 757 TTGAGGGGTGCAGTAACGTCACCGATATAAGCTTCGGCGGCATCATGCATGAGGGCTTCA 816 Query 25652 AAAGCAAATTCCTGCGGCACCAACTGGCTGCAAAGAACCGCATGTTGGGCGACGCTGTAG 25711 || || ||||| ||| || | | |||||| ||||| | ||| || ||||||||||| Sbjct 817 AAGGCGAATTCGGGCGCGACAAGTTCGCTGCAGAGAACGGAATGCTGTGCGACGCTGTAA 876 Query 25712 AAGTGCGAAAGATGACCGGCAAAGCGACAGATATTTGAAAG 25752 || | | ||||| || |||||||| ||| | || || || Sbjct 877 AAATCCCGCAGATGCCCTGCAAAGCGGCAGGTGTTGGAGAG 917 >SEQ70014 Length=1272 Score = 84.2 bits (92), Expect = 6e-12 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 23198 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA 23243 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126565025656320