Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_022973.1 Length=50755 Score E Sequences producing significant alignments: (Bits) Value seq276562 179 1e-40 seq311842 111 5e-20 >seq276562 Length=247471 Score = 179 bits (198), Expect = 1e-40 Identities = 314/445 (71%), Gaps = 24/445 (5%) Strand=Plus/Minus Query 4251 GAAAGGCAGAC-ATGAGCTTCCGCACTGCTTATGGCAATGCGTACTCCGAGAACGGTTGG 4309 |||||||| || ||||| || ||||| || || ||||| | || ||||| ||| ||||| Sbjct 237578 GAAAGGCACACCATGAGTTTTCGCACCGCCTACGGCAACACCTATTCCGAAAACAGTTGG 237519 Query 4310 CGTATGTGCAACCGCGACGAGTGCG---TGACGG---TCTCCGGACCGTACATGG---AC 4360 || ||||||||||||||||| |||| | ||| || |||| | |||| ||| | Sbjct 237518 CGCATGTGCAACCGCGACGAATGCGACATCACGCGCATCCCCGGTCTGTACCTGGTTGAT 237459 Query 4361 ACCGCACCGCTCCG--ACGTGGCGCTGCCGAGAAGCTCCTCGGAGAGT--TCGT-CAGGC 4415 ||||||||||| || | | ||| | || || | | ||||| | | | || | || Sbjct 237458 ACCGCACCGCTGCGCAAGGGGGCACCGCTGACCA--TTCTCGGGGCATGGTTGTACTGGT 237401 Query 4416 GCTACCACCAGGTGTGCGCCCCGGTCGTATCCCCCGTATGGGGCTGGTCGGAGACGAACG 4475 ||| | | || || | || | ||||| || |||||||||||||| || |||| Sbjct 237400 ATGACCGCAACGT---CGAAGAGATCATCTCCCCGGTGTGGGGCTGGTCGGACACCAACG 237344 Query 4476 ACGTAGGCAACTCGAATCACCTGTCAGGCACGGCAGTCGACATCAACGCTCCGCAGTGGC 4535 |||| | |||||||||||||||| | ||||| || || ||||||||||| || |||| | Sbjct 237343 ACGTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTGGACATCAACGCACCCCAGTACC 237284 Query 4536 CGTGGGGCTACCGGACGATG-CCAGC-CGCGCTGGTTGCCAAGATCAACGTCCTGCTGGA 4593 ||||||| || || ||| ||||| | ||| | ||||| || || || | Sbjct 237283 CGTGGGGTGCACGAACCATGCCCAGCACTCGC--ATCGCCAAAGTCCGCGAAGGACTTAA 237226 Query 4594 CCAGTTCGAGGGAGCCATCTACTGGGGCCGCAACTGGAATCGCCCCGACGAGATGCACTT 4653 | || ||||| || |||||||||| ||||||| ||| ||||||| ||||||| Sbjct 237225 GCTCTTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAACCGCGCCGACGAAATGCACTA 237166 Query 4654 CCAGCTCAACTGGGCTGAAGGCGAC 4678 |||| | ||| | ||||||||| Sbjct 237165 CCAGATGGCATGGCCCGAAGGCGAC 237141 >seq311842 Length=41669 Score = 111 bits (122), Expect = 5e-20 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 5030 CCCGTTGTTGTCGGCCCTGCCGACGACCAACTCAACATGCGATTCAACTGCCTTGGCGGC 5089 ||||| | || || || || |||||||| |||||||||| ||||||||||| |||||| Sbjct 34823 CCCGTCATCGTGGGGCCCGCTGACGACCAGCTCAACATGCAGTTCAACTGCCTCGGCGGC 34882 Query 5090 AAGACGCTGGTCGAAGCCGTGGCAGAGATCCGCGACAAGGTCTGCGGCA 5138 |||| || ||||| ||||| || |||||||| |||||||| ||||||| Sbjct 34883 CAGACCCTCGTCGAGGCCGTCGCCGAGATCCGAGACAAGGTGTGCGGCA 34931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161606203580352