Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq292326 122 2e-23 seq215851 120 8e-23 seq127696 105 2e-18 seq351518 86.0 2e-12 seq346060 86.0 2e-12 seq113908 80.6 7e-11 >seq292326 Length=7945 Score = 122 bits (134), Expect = 2e-23 Identities = 133/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 ||||| |||| ||| || |||||||| ||||| | |||||| || | |||||| |||||| Sbjct 5458 CCCTTACGCAAATATTCACCGGCAATTTCGGCAAGCTTGCCAAACAGCACGACACGGTGC 5399 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 |||||||| ||||| || |||| || ||| ||| || |||| | || || || ||| Sbjct 5398 CATTCGGTTTTTTCTTTCTGCTCACCAGTCGCCTTATCGCGCCAGCTCTCTGAGGTCGCC 5339 Query 23659 AGGCTGATGTT-GCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTC 23711 ||| | ||||| ||| || ||| | || ||| ||| ||| || |||||||| || Sbjct 5338 AGGGTAATGTTAGCA-ACAGCACCACCATTTGGCATGTAACGGACTTCCGGATC 5286 >seq215851 Length=1992 Score = 120 bits (132), Expect = 8e-23 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 || |||||||| || ||||| || | || || | |||||||| | ||| ||||||||| Sbjct 768 CCTTTGCGCAGGTATTCGCCCGCCACTTCAGCCAGTTTGCCGAACAGCACAACGCGGTGC 709 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 || |||||||| || || | ||||||||| ||||| |||| |||| || || ||| Sbjct 708 CACTCGGTCTTCTCTTTCTGTTCGCCGGTCGCTTTGTCACGCCAGCTTTCGGAGGTCGCC 649 Query 23659 AGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCC 23718 ||| | |||||| || || ||||||| ||| ||| || ||||| || || | |||| Sbjct 648 AGGGTAATGTTGGCCACTGCGCCGCCGTTCGGCATGTAACGGACTTCTGGATCCTGACCC 589 Query 23719 AGGCGGCCAATCAGGTCTACTTTGTT 23744 || || | ||| ||||||||| Sbjct 588 AGATTCCCGACCAGAATTACTTTGTT 563 >seq127696 Length=2166 Score = 105 bits (116), Expect = 2e-18 Identities = 206/299 (69%), Gaps = 18/299 (6%) Strand=Plus/Plus Query 23425 AGCAGCAGAAGTTCGCCTCTGAAGCTGTCCACCACAATTTCGGTGGTGTAGTTGGTCG-C 23483 |||||| |||||||| | ||||| | | ||| || || ||||||||| | ||| | Sbjct 1552 AGCAGCGCCAGTTCGCCGCGGAAGCGCTGGATCACGATCTCCGTGGTGTAGC-GCTCGGC 1610 Query 23484 GCCGTCTTTTTC---CCACTTGCGTGTCTGCAGCTTGCCGATGATCGCGCATTCACTT-- 23538 ||| | || ||||||||| ||||| |||| || || | ||| || | Sbjct 1611 GCCCGACTGGTCGGTCCACTTGCGGGTCTGGAGCTGCCCC----TC-CACATAGACCTTC 1665 Query 23539 ---CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCG---AAGAACACGACG 23592 |||||||| ||||||| |||| |||| || | ||| || |||| ||||||| Sbjct 1666 GAGCCCTTGCGGAGATACTGCTCGGCGATCTTCGCCAGATTGTCGTTGAAGATCACGACG 1725 Query 23593 CGGTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGAC 23652 |||||| || ||||| ||| |||||||||| |||||||||| |||||||||||| Sbjct 1726 GAGTGCCACTCCGTCTTCTCCCGGCGCTCGCCGCTCTGCTTGTCGCGCCAGGTTTCCGAG 1785 Query 23653 GTGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTC 23711 || || | || | ||| || | |||||| | |||| |||||| ||||| || Sbjct 1786 GTCGCGATGCGCAGGTTCACCACCGGCTCGCCGGAGTTCAGGCGGCGCACCTCCGGATC 1844 >seq351518 Length=1145 Score = 86.0 bits (94), Expect = 2e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 21063 TGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCC 21122 ||||| ||||||||||| |||||||||||||| | ||||||||| |||||||||| Sbjct 1065 TGGCGCCCCCGACAGGAATCGAACCTGTGACCCGCGGATTAGAAGGCCGCTGCTCTATCC 1124 Query 21123 AGCTGAGCTACGG-GGCCG 21140 | ||||||||||| ||||| Sbjct 1125 AACTGAGCTACGGAGGCCG 1143 >seq346060 Length=1928 Score = 86.0 bits (94), Expect = 2e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 11067 CGTGCCGGTGCTGGTGCGCGAGTCCTGGAACCCGGAGACTTGCCCAGTCGAGCTGCTGCC 11126 ||||||||| | |||| || ||||||||| | || ||||| || |||||||| Sbjct 585 CGTGCCGGTTCCCCTGCGTGATCTGTGGAACCCGAAAACCTGCCCGGTGCCTCTGCTGCC 644 Query 11127 GTGGCTGGCCTGGGCGTTCAGCGTGGACGAATGGGACGCCGCCTGGTCAGAAGCCGAAAA 11186 | ||||| ||||||||| || || ||||| | || ||| | || | || || Sbjct 645 CTATCTGGCGTGGGCGTTCTCTGTCGATCGCTGGGATGAGGCGTGGCCGGAGGACGTGAA 704 Query 11187 GCGCGACGTGGTGGCG-CAGAGCTACAACGTACACCGACACAAGGGCACCATTGACGCAA 11245 ||| | |||||| || | | | | | || | ||||| |||||||||||||| | ||| Sbjct 705 GCGGGGCGTGGTTTCGGCTGCGTT-CTACATTCACCGGCACAAGGGCACCATCGGCGCCG 763 Query 11246 TGGAACGAGCCCTGCGGCCGTTGGGATACCTGATCGACGTGAAGGAATGGT 11296 || || | || |||| | || ||||||||| |||| | ||||||| Sbjct 764 TGCGCCGCGTAGTGGAGCCGCTCGGCTACCTGATCAACGTTATCGAATGGT 814 >seq113908 Length=2468 Score = 80.6 bits (88), Expect = 7e-11 Identities = 159/233 (68%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 11069 TGCCGGTGCTGGTGCGCGAGTCCTGGAACCCGGAGACTTGCCCAGTCGAGCTGCTGCCGT 11128 ||||||||| | ||||||| ||| | || | || || || ||| | |||||||||| Sbjct 625 TGCCGGTGCCGCTGCGCGATCTGTGGGATCCAGCCACCTGTCCGGTCAATCTGCTGCCGT 566 Query 11129 GGCTGGCCTGGGCGTTCAGCGTGGACGAATGGGACGCCGCCTGGTCAGAAGCCGAAAAGC 11188 ||||||||||| ||| || || | ||||| | ||||| | |||| | || | Sbjct 565 ACCTGGCCTGGGCCTTCTCGGTCGATCATTGGGATGAAACCTGGACGGAAGATGCCAAAC 506 Query 11189 GCGACGTGGT-GGCGCAGAGCTACAACGTACACCGACACAAGGGCACCATTGACGCAATG 11247 || ||| || | ||| | | | | | ||||| |||||||||||||| | ||| || Sbjct 505 GCAGCGTCGTAGCCGCCG-CTTTCTTCATCCACCGTCACAAGGGCACCATCGGCGCTATT 447 Query 11248 GAACGAGCCCTGCGGCCGTTGGGATACCTGATCGACGTGAAGGAATGGTGGGA 11300 || | || |||||||| ||||||||| | || || |||||||| Sbjct 446 CGCCGCGTGGTGGAACCGTTGGGTTACCTGATCAAACTGCGCGAGTGGTGGGA 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138692580733056