Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023564.1 Length=52974 Score E Sequences producing significant alignments: (Bits) Value seq103768 417 3e-112 seq311842 224 3e-54 seq276562 86.0 2e-12 SEQ87579 86.0 2e-12 seq353213 82.4 3e-11 seq299611 80.6 9e-11 >seq103768 Length=2474 Score = 417 bits (462), Expect = 3e-112 Identities = 395/504 (78%), Gaps = 14/504 (3%) Strand=Plus/Plus Query 5907 GTAACCCGCAAGCAAGCGCAGTGGGTCCACGACATGGCACGTGCTCGGGCTGGCCTACAG 5966 || ||||| ||| |||||| ||||||||| |||| || || || ||||| | Sbjct 1400 GTCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCAAGGGCCTGCCC 1459 Query 5967 TACGCCTACGGTGGAGCTTTCACCAACGACCCTAGGGTTTCCACCGACTGCTCTGGTCTG 6026 |||||||||||||| || |||||| |||||| | || || ||||| ||||| || ||| Sbjct 1460 TACGCCTACGGTGGCGCGTTCACCCGCGACCCGCGCGTGTCGACCGATTGCTCCGGCCTG 1519 Query 6027 GTGCTTCAGACCGCCGCCTGGTACGGCGGTCGCACCGACTGGGTCGGTAACCGGTACGGA 6086 ||||| |||||||| ||||||||| | || |||||||||||| ||| ||||| ||||| Sbjct 1520 GTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAAACCGCTACGGC 1579 Query 6087 TCCACCGAGAGTTTCCGTCTCGACCACAAGATCGTCTACGACCTGGGCTTCAAGCGCCTG 6146 |||||| ||||| || ||| || |||||||||||||||| || |||||||||||| Sbjct 1580 AGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGTTCAAGCGCCTG 1639 Query 6147 CCTCCGGGCGGCGTGGCTGCGCTGCCGATCAAGCCGGTAATGCTCGTCGGTCTGATGCAC 6206 || ||||||| |||| ||||||||| |||||||||| ||||||||||| ||| |||| Sbjct 1640 CCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCGGGCTGCAGCAC 1699 Query 6207 GGAGGCGGCGGGGCTAACTCGCACACCTCCTGCACGCTGATGACGATGGACATCCCCGGT 6266 || |||||||| | ||||||||||| | |||||||| |||||||||||| | ||||| Sbjct 1700 GGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGGACGTTCCCGGC 1759 Query 6267 GGCCCGGT-GAAGATGTCCGCTCGCGGCGTCGACTGGGAGTCCCACGGTAACCGCAACGG 6325 || ||||| | || ||| | |||||||||||||||||||||| |||| Sbjct 1760 GGGCCGGTCGTCGA-GTCGGTGCGCGGCGTCGACTGGGAGTCCCGCGGT----------- 1807 Query 6326 ACACGGTGTGGACCTGTACGACGGTGCCAGAGCCTGGAATGACCCGATGTTCCACGACTT 6385 |||| ||| | ||||||||||| || | |||||||| || ||| ||||||||||||| Sbjct 1808 -GACGGCGTGTATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGTTCCACGACTT 1866 Query 6386 CTGGTATCTGGACGCCGTTCTCGA 6409 |||||| || ||||| |||||||| Sbjct 1867 CTGGTACCTCGACGCGGTTCTCGA 1890 >seq311842 Length=41669 Score = 224 bits (248), Expect = 3e-54 Identities = 326/455 (72%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 5958 GGCCTACAGTACGCCTACGGTGGAGCTTTCACCAACGACCCTAGGGTTTCCACCGACTGC 6017 ||| | | |||||| | |||||| || |||| | |||||| | | |||||||||||| Sbjct 34343 GGCTTGCCGTACGCATTCGGTGGCGCGTTCAGTACCGACCCGAAGCGCTCCACCGACTGC 34402 Query 6018 TCTGGTCTGGTGCTTCAGACCGCCGC-CTGGTACGGCGGTCGCACCGACTGGGTCGGTAA 6076 || || ||||| | ||||||| ||| ||| | | || |||||||||||| || || Sbjct 34403 TCCGGGCTGGTCTTGCAGACCGGCGCGCTGCTGATG-GGCCGCACCGACTGGTCGGGAAA 34461 Query 6077 CCGGTACGGATCCACCGAGAGTTTCCGTCTCGACCACAAGATCGTCTACGACCTGGGCTT 6136 ||| ||||| || || || |||||||| || || ||| |||| |||| | || || Sbjct 34462 CCGCTACGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTTCGACATCGGATT 34521 Query 6137 CAAGCGCCTGCCTCCGGGCGGCGTGGCTGCGCTGCCGATCAAGCCGGTAATGCTCGTCGG 6196 ||||||||| || | |||| || |||||| | |||| | ||||||||||| Sbjct 34522 CAAGCGCCTTCCCGCCAGCGGGGTCCAAGCGCTGGGTTTTGCGCCGATCATGCTCGTCGG 34581 Query 6197 TCTGATGCACGGAGGCGGCGGGGCTAACTCGCACACCTCCTGCACGCTGATG-ACGATGG 6255 ||| |||||| |||||||| | || |||||| | ||||| ||| | ||| | Sbjct 34582 ACTGCAGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCTGTTCTACGCCG- 34640 Query 6256 ACATCCCCGGTGGCCCGGTGAAGATGTCCGCTCGCGGCGTCGACTGGGAGTCCCACGGTA 6315 || | || || || | | || ||| | ||||| ||||||||||| |||||| | Sbjct 34641 ACGTTCCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGGAGAGCCACGGAA 34700 Query 6316 ACCGCAACGGACACGGTGTGGACCTGTACGACGGTGCCAGAGCCTGGAATGACCCGATGT 6375 |||||||||| ||| || ||| |||||| ||| | |||||||| |||||| ||| Sbjct 34701 ACCGCAACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGAACGACCCGCTGT 34760 Query 6376 TCCACGACTTCTGGTATCTGGACGCCGTTCTCGAA 6410 |||| ||||||||||| ||||||||| |||||| Sbjct 34761 TCCAAGACTTCTGGTACCTGGACGCCAAGCTCGAA 34795 >seq276562 Length=247471 Score = 86.0 bits (94), Expect = 2e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 24020 ACGTGGTCGACGGATTCAAGGGAGTCTTCGACGGGTGGTTCGGCGGTGGACGAGGCTCGG 24079 |||| ||||| || |||||| | | | || ||||||||||||| | ||| | Sbjct 238818 ACGTAGTCGATGGCTTCAAGAACATGTACAACCAGTGGTTCGGCGGTTCTTCGGCCTCCG 238759 Query 24080 GCTCTCCGCAGGAGATCAAGCAGACCATCGAGGCGATCAAGAACGCCGTCGTCGGCGGAT 24139 || | ||| || || |||||||||||| ||| |||||| | || ||| ||||||||| Sbjct 238758 GCACGCCGGTCGAAGTCCAGCAGACCATCGCGGCCATCAAGCAAGCTGTCATCGGCGGAT 238699 Query 24140 ACACGATCCACACGTTCACCTC 24161 |||| || |||| |||||||| Sbjct 238698 ACACCGTCGACACCTTCACCTC 238677 >SEQ87579 Length=2886 Score = 86.0 bits (94), Expect = 2e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 5589 TGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGGGTTCCAGGTTCGAGTCCTGG 5648 ||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct 1479 TGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAGTCCTGT 1420 Query 5649 CG 5650 || Sbjct 1419 CG 1418 >seq353213 Length=1209 Score = 82.4 bits (90), Expect = 3e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 5590 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGGGTTCCAGGTTCGAGTCCTG 5647 ||||||||||||| |||||||||||||||||| |||| |||| ||||||||| ||||| Sbjct 447 GTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 >seq299611 Length=127492 Score = 80.6 bits (88), Expect = 9e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 5589 TGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCGGGTTCCAGGTTCGAGTCCTG 5647 |||||||||| ||| |||||||||||||||||| |||| |||| ||||||| ||||||| Sbjct 57903 TGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 57961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168676893206016