Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq125061 232 9e-56 seq281964 87.8 3e-12 >seq125061 Length=1171 Score = 232 bits (256), Expect = 9e-56 Identities = 633/956 (66%), Gaps = 25/956 (3%) Strand=Plus/Plus Query 27945 GATATCGTCATCTGGGTTCAGACGAACACCACAAGCACCTTCAACGTAAAGAATCGGAGC 28004 ||| | ||| || | || || || || || || || ||||| | ||| | || || || Sbjct 230 GATGTTGTCGTCGGCCTTGAGCCGTACGCCGCAGGCGCCTTCCATGTACAAGATTGGCGC 289 Query 28005 GACGCTGGCTTTAACGCCACGCAGACGATCAACGCGAGCCATCAAAGCTTGCTTGGTGAT 28064 || | || || | ||| ||| || | | ||| | ||||| || | || | | Sbjct 290 CACCCGCGCCTTGATGCCTTCCAGCCGGGCGATGCGCGTCATCAGGGCCTTTTTCGCCAG 349 Query 28065 TTCCATACGTTCTTCCAGAAGATCCCAGAAACGCATAGGATTGCCATTTGAATCAAGAGC 28124 | || || | ||||| || ||||||| ||| || ||| | | || || || Sbjct 350 CTGCAGGCGCTGATCCAGCAGCGCCCAGAAGCGCGACTCATCGCCCATCGCCTCCAGCGC 409 Query 28125 GATTCGCGGCAAGTTCAGAGTGACCACACCCAAGTTGTTACGGCCTTCATGAACTTCAAC 28184 ||| ||||||| ||| || ||| || || | |||||| ||||| || || || | Sbjct 410 GATGCGCGGCAGGTTGAGGCTGATGACGCCGATGTTGTTGCGGCCGTCGTGCACCAGCTC 469 Query 28185 ACCGTTTTCGTCTTCCCAGCGATGC--AAGAAACTACGGCATCCCATTGGGAATTTGAAA 28242 |||| | || | | ||| | ||| || ||||| ||||| || |||||| Sbjct 470 GCCGTCCTGCTCGTA-----GGTGCCGAGGAAGCTGCGGCAGCCCATCGGCGTTTTGAAC 524 Query 28243 CTACCAGTCACTTCAACGATCTTATCATAGCTCAGAATGTCCGGATACATACGTTTCGCA 28302 || || || | || | || ||| ||| | ||||||||||| ||||| || || Sbjct 525 GAGCCGGTGACCTTCACCACCTGATCGTAGTTGAGAATGTCCGGGTACATGCGCTTGCTG 584 Query 28303 GCGCATTCCAGAGCCAACTGTTTGATACGATACAGCGGATCA--GT-CGGGTTCAAGTTG 28359 ||||| ||||| |||| ||| ||||| || |||||| || | ||| |||| Sbjct 585 GCGCACTCCAGCGCCAGCTGCTTGATGTCGTAGTTCGGATCGCCGTACTGGTG---GTTG 641 Query 28360 TGTCCGTCTTTCAGAGCGAATACCAGTTTCGGGAAAACAGGGGTGATACCCTCTTTACCA 28419 | ||||| | ||||| ||||| || ||||| || | ||| ||| | ||| || Sbjct 642 AGGCCGTCGCGGATGGCGAACACCAGCTTGGGGAACACGGCGGTCTTACGGTTTTTGCCC 701 Query 28420 AGACCAGCCAAACGAACTTTCAGGATTGCTTCTTGAATCAGTTCTGACTCCCAGCTAGTA 28479 || || || | || ||||||||| | || ||||| || |||||||| || Sbjct 702 AGCCCGGCGATGCGGTTTTTCAGGATCGAGCGCTGGATCAGGCGCGATTCCCAGCTGGTG 761 Query 28480 CCAAGACCAAAGCCGAAGGTACAGAACGGAGTTTGACCATTTGCGGAGTGCAGAGTGTTG 28539 || || || ||||||||||| |||||| || || || || |||| |||||| |||||| Sbjct 762 CCGAGGCCGAAGCCGAAGGTGACGAACGGCGTCTGGCCGTTAGCGGTGTGCAGGGTGTTG 821 Query 28540 ACCTCATACTCCAGACCTTGCATAGCATCATATACAG-CTTTGCGAGTCTTTGCAATAGC 28598 ||||| |||||||| || | || || || ||| |||| || || || || Sbjct 822 ACCTCGTACTCCAGCGACTGGAAGGCGTCGTA-ACACTCTTTCTCGGTGCGCGCCATGGC 880 Query 28599 ATATTGCTGTTGA--TCTGGAATTTTCCAGTAACGAGCTTCATCCAAGTGCTTTTCGTGT 28656 ||| || ||| || || || | ||| || | | || ||| ||| || Sbjct 881 ATA--GCCTTTGGCGTCCGGGATCTGCCACGCTTCCGCCACCTGCAGGTG-TTTGCGGAA 937 Query 28657 G-TCATTTTAACATACGGTGCCAGCACTTCGTCAATGCGATTGATTGTGTTACCGCCATA 28715 | || | || |||| ||||| | ||| || ||||| ||||| ||| | |||||||| Sbjct 938 GCTCTCGTCGACGAACGGCGCCAGAATTTCATCGATGCGGTTGATGGTGGTGCCGCCATA 997 Query 28716 AATGTGACTTGCTACTTGAGCGATGATTTGAGCAATCACGGCAGCAGCGGTAGAAATGCT 28775 ||| || || || ||||| |||||||| || || ||||||| | ||||| || || Sbjct 998 AATATGGCTGGCAACTTGGGCGATGATCTGTGCGGTCACGGCGGTGGCGGTGGAGATCGA 1057 Query 28776 TTTCGGAGTCTCGATTTGAGCATTACCCATTCTGAAACCACGTT--TCAACATTCCTTCA 28833 |||||| | ||| || | || || ||||| |||| | |||| ||| ||| |||| Sbjct 1058 TTTCGGCGGCTCAATCTCGGCGTTGCCCATCTTGAAGC--CGTTGGTCAGCATGCCTTTC 1115 Query 28834 ACATCTATCAACATGCAGTTAAACATTGGGAAGAACGGTGAATAATCAAGATCGTG 28889 | ||| |||| ||||||||| ||||| ||||||||||| || || || |||||||| Sbjct 1116 AGATCGATCAGCATGCAGTTGAACATCGGGAAGAACGGCGAGTAGTCGAGATCGTG 1171 >seq281964 Length=1671 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960 ||||| || |||||| || |||||||||||||||||||| ||||||||| ||||||||| Sbjct 1444 CCGTAAGGGGTTCGAACCCTTGTTACCGCCGTGAAAGGGCGGTGTCCTAGGCCACTAGAC 1385 Query 94961 GAACGG 94966 |||||| Sbjct 1384 GAACGG 1379 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960 ||||| || |||||| || |||||||||||||||||||| ||||||||| ||||||||| Sbjct 1624 CCGTAAGGGGTTCGAACCCTTGTTACCGCCGTGAAAGGGCGGTGTCCTAGACCACTAGAC 1565 Query 94961 GAACGG 94966 |||||| Sbjct 1564 GAACGG 1559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707120744199680