Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023720.1 Length=53142 Score E Sequences producing significant alignments: (Bits) Value seq216857 217 5e-52 SEQ97744 152 2e-32 >seq216857 Length=94037 Score = 217 bits (240), Expect = 5e-52 Identities = 167/198 (84%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 41494 GTCGATGGCCTTGGATACGTCGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCAGGCGAT 41553 |||||| |||||||| ||||| | ||||||||||||||| ||||| | ||||||||| Sbjct 15477 GTCGATCGCCTTGGACACGTCCATCGACTTCGGGAACCCCGACCCGTACAACCAGGCGAT 15418 Query 41554 GGAGTCGCGGAGCTCAAACCCGGCGTCCTCGATCGCCGCCGCCAGCCGGTGCCAGGTGCG 41613 | |||||||||||| || |||| ||||||||||| ||||| ||||| ||||||||||| Sbjct 15417 GCTGTCGCGGAGCTCGAAACCGGAATCCTCGATCGCAGCCGCGAGCCGATGCCAGGTGCG 15358 Query 41614 GGAGCCGCCGAAGGCGAGCAGGTACCCACCCGGCTTGAGGACCCGCAGACACTCGGCCGC 41673 ||||||||||| ||||| |||| ||||||||||||||||| || || ||||||| ||| Sbjct 15357 CGAGCCGCCGAACGCGAGTAGGTGTCCACCCGGCTTGAGGACGCGTAGGCACTCGGACGC 15298 Query 41674 CCACTCCTGGCTCCACTG 41691 ||||||| ||| ||| || Sbjct 15297 CCACTCCAGGCACCATTG 15280 Score = 141 bits (156), Expect = 3e-29 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 41219 CGGCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGGACGTTCGCCGCCACCGTG 41278 ||||| |||| || || | |||||| || ||||||| || |||||||| ||||| ||| Sbjct 16010 CGGCATCCGTCAATATTTAGCGCCCCGGTGCCGTGCTTGAGCACGTTCGCGGCCACGGTG 15951 Query 41279 CCCGCCAGGGGTTTCCGCGCGACCACGATGGGCTCAAACGCCGGTTTCAGCGCCGTACCC 41338 || | |||||||||||| || || ||||| ||||| || | ||| || ||||| |||||| Sbjct 15950 CCGGACAGGGGTTTCCGGGCCACGACGATTGGCTCGAATGACGGCTTGAGCGCGGTACCC 15891 Query 41339 CAGCCCTGCCACTGCTTGGCGGCGTC 41364 ||||||||||| ||||||||||| || Sbjct 15890 CAGCCCTGCCATTGCTTGGCGGCTTC 15865 Score = 100 bits (110), Expect = 1e-16 Identities = 181/262 (69%), Gaps = 17/262 (6%) Strand=Plus/Minus Query 40848 CGATGAGCGGGATGTAGTCAGCTCCTTTTTCGATGGCGATACAGTCGAAACCCTCGAGAA 40907 |||| ||||| | ||| || || | ||||| ||||| || | ||||||| | Sbjct 16576 CGATCAGCGGCAAGTACTCGGCCTCACGCTCGATCGCGATGCACTGCCGGTCCTCGAGGA 16517 Query 40908 GACACGCCTCCACCGTGGTTCCGCTGCCCGCGAAGGGGTCCAGCACTACGCCCCCCGGCG 40967 || ||||| |||| || |||||||| ||||| || || | ||| || | || | || Sbjct 16516 CGCATGCCTCGGCCGTCGTGCCGCTGCCGGCGAACGGTTCTAACACCACCGCGCCAGCCG 16457 Query 40968 GGGTGACCAGCTTGACCAGCCACCGCATGAGGGCGAGTGGCTTGACGGTGTTGTGCGCAA 41027 ||||||| || |||||||||||||| ||| | || |||||||| |||| | Sbjct 16456 GGGTGACGAGTCGCACCAGCCACCGCATCAGGTCCAGCGGCTTGAC--CGTTGGG----- 16404 Query 41028 CCTTGTTGC-CGTCTTCGTTGACGTAGCTGGGGCGCTCCTTGGTGGGAGCCTTGGCCTGA 41086 |||||| || | || | ||| |||||||||| || || |||||||||| Sbjct 16403 ---TGTTGCACGCCATC---GGCGT---TGGGGCGCTCTGACGTTGGCGCCTTGGCCTCG 16353 Query 41087 TACTTGAACACGGGGAAGAACC 41108 || ||||||||||||||||| Sbjct 16352 TAGCGGAACACGGGGAAGAACC 16331 >SEQ97744 Length=86731 Score = 152 bits (168), Expect = 2e-32 Identities = 139/174 (80%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 41493 GGTCGATGGCCTTGGATACGTCGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCAGGCGA 41552 |||| ||||| | || | || | ||| || |||||||| || ||||||||| |||| Sbjct 15315 GGTC-ATGGCGTCGGTGGCATCAACCGATTTTGGGAACCCTTGGCTGTAGAGCCACGCGA 15373 Query 41553 TGGAGTCGCGGAGCTCAAACCCGGCGTCCTCGATCGCCGCCGCCAGCCGGTGCCAGGTGC 41612 | ||||| ||||| || ||||||||||||||||| | ||||||||||||||||||| Sbjct 15374 TATGATCGCGTAGCTCGAATCCGGCGTCCTCGATCGCGACGGCCAGCCGGTGCCAGGTGC 15433 Query 41613 GGGAGCCGCCGAAGGCGAGCAGGTACCCACCCGGCTTGAGGACCCGCAGACACT 41666 | || || |||||||| ||||||| ||| || || |||||||| |||||||||| Sbjct 15434 GTGATCCACCGAAGGCCAGCAGGTGCCCGCCAGGTTTGAGGACACGCAGACACT 15487 Score = 118 bits (130), Expect = 4e-22 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 41214 CGACTCGGCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGGACGTTCGCCGCCA 41273 |||| ||||||||||| |||| || |||||| || |||| |||||||||| ||||| | Sbjct 14792 CGACCCGGCAGGCGTCAATGTGCAGCGCCCCGGTTCCGTAGGCCAGGACGTTGGCCGCGA 14851 Query 41274 CCGTGCCCGCCAGGGGTTTCCGCGCGACCACGATGGGCTCAAACGCCGGTTTCAGCGCCG 41333 | ||||||| || ||||| || || ||||| | |||||||| || ||||| ||||| | Sbjct 14852 CGGTGCCCGACAACGGTTTACGTGCCACCACCACTGGCTCAAATGCGGGTTTGAGCGCGG 14911 Query 41334 TACCCCAGCC 41343 | |||||||| Sbjct 14912 TGCCCCAGCC 14921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169212213556224