Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq276562 203 1e-47 SEQ97744 190 8e-44 SEQ31283 149 3e-31 seq353213 89.7 2e-13 SEQ87579 89.7 2e-13 seq299611 86.0 3e-12 >seq276562 Length=247471 Score = 203 bits (224), Expect = 1e-47 Identities = 315/447 (70%), Gaps = 10/447 (2%) Strand=Plus/Minus Query 12457 TTCAAGCTGCAAGGTCTCGGCAACACCGCCGAACAGGT---GCAGTCCATCATGGACAAC 12513 |||||| |||| | |||||||| |||| ||| |||| ||||||| | | Sbjct 246967 TTCAAGTTGCAGGCCCTCGGCAATGACGCCACCGCGGTCGCGCAG---ATCATGGCCGCC 246911 Query 12514 GCGCTGGCTGCGGTGAAGGGCACCGCGTTCGGCCTCGACGAGGCAGCCACCACGGCCGCA 12573 |||| || |||||||||||||||| ||| | ||||| || |||||||| || || Sbjct 246910 GCGCAGGGCTCGGTGAAGGGCACCGCCTTCTCGATGGACGAAGCGGCCACCACAGCGGCC 246851 Query 12574 TCCGCGGTGGCCGCCGGCATCAAGCCCGGGCAACAGCTCACCGACTACCTGAAGTTGGTC 12633 | ||||| |||||||| |||||||||| | | | || | ||||||| ||| Sbjct 246850 ACGGCGGTCGCCGCCGGGGTCAAGCCCGGTGAGGACTTGTCCAAGTACCTGACCACCGTC 246791 Query 12634 GGCGACACCGCGGCGATTGCCGGCACATCGCTGGCCGACATGGGCGCGATCTTCAACCGT 12693 | || |||| ||||| || ||| | ||| ||| ||||| ||||||||| Sbjct 246790 GCTGATGCCGCCGCGATCGCGGGCGCCGACATGGGCGATATGGGGCACATCTTCAACAAG 246731 Query 12694 GTGCAGACGTCGGGCAAGGCGTTCACCGGCGATCTTAACCAGCTCGCCGACCGCGGCCTG 12753 |||||||| |||||||||||| | |||| || || ||| ||| | ||| || || || Sbjct 246730 GTGCAGACCTCGGGCAAGGCGATGACCGATGACCTGAACATGCTGGGCGATCGGGGATTG 246671 Query 12754 CCTGTATTTCAGTGGCTTCAAGAGGAATACGGCGTAAGCGGCGCAGCGCTGGCGAAGATG 12813 || | || ||||| ||| |||||||| || | |||||| | |||| | |||||| Sbjct 246670 CCGATCTTCGCCTGGCTGCAAAAGGAATACAAGGTCACCGGCGCCGAGCTGTCCAAGATG 246611 Query 12814 GTCGAAAAGGGCAAGGTCGACGCGGCAACGTTCCAACGTGTTGTCG--CGGAACGGATCG 12871 |||||||||||| |||| ||| | || || ||||| || || ||| | ||||| | | Sbjct 246610 GTCGAAAAGGGCCAGGTTGACTCAGCCACATTCCAGCGCGTCATCGCCCAGAACG--TGG 246553 Query 12872 GCGGCGCCGCGCAGAACATGGGCGGCA 12898 |||| |||| |||| |||||||||| Sbjct 246552 GCGGTACCGCCAAGAAGATGGGCGGCA 246526 >SEQ97744 Length=86731 Score = 190 bits (210), Expect = 8e-44 Identities = 412/611 (67%), Gaps = 13/611 (2%) Strand=Plus/Minus Query 1117 GCGCGCCACGTCATTAAGCCTGAAGGCATCGTGTCGACGTCATGGCCGTC--TGTGCGGC 1174 ||||| ||||| | ||||| ||||| |||||||| ||||||||| | |||| | Sbjct 8607 GCGCGGTACGTCGTAGCCCCTGACGGCATTGTGTCGACCGAATGGCCGTCCATCTGCGCC 8548 Query 1175 ATGAGTGCAACGTCAACATGGGCCTGTTTTTCGATCAGTGGCAGGACGACCTCGGGAAGC 1234 | ||||| | | |||||| | |||||| | ||||| |||| ||| || | Sbjct 8547 ACA--TGCAAAG---AGATGGGCATCGAGTTCGATGACTGGCAAGACGGCCTGGGTCGCC 8493 Query 1235 TGGTTTGCGCCAAACGATCCGACGGTCTGTTCGCCGCCGACATGTTCGCGATGTCGGTGC 1294 || | | ||||| || ||||||| |||| |||| | |||| | ||||| || | | Sbjct 8492 TGATCTTGGCCAAGCGCGCCGACGGCCTGTACGCCTCGGACACGACGGCGATCTCAATCC 8433 Query 1295 CACGCCAGACGGGTAAAACGTACTTCCTCGGCGCGCTGGTTTTCGCGCTGTGCAAGATGA 1354 | || ||| | || || || | | || ||||||| | || ||||||||||||| | | Sbjct 8432 CCCGGCAGTCCGGGAAGACTTTCCTCATCGGCGCCATCGTGTTCGCGCTGTGCATCAAGT 8373 Query 1355 ATCCCGGCACGACCGTGATTTGGACGGCGCACCGCACCCGCACCGCGGCGGAAACGTTCA 1414 |||| ||| | || || ||||| ||||||| | || ||| ||||| ||| Sbjct 8372 ATCCGGGCCTGCGGGTCATCTGGACCGCGCACCTGTTCAAAACGGCGCGTGAAACTTTCG 8313 Query 1415 AGAGCATGCAGGCGC--TCGC-GCTGCGTGAAGAGATCGCGCCGCACGTGCAGCAAGTCC 1471 || ||||||||| ||| ||||| | | || |||| || | | |||| Sbjct 8312 AGTCGATGCAGGCGACATCGAAGCTGCCCGGCG---TCAAGCCGTACATCGATTTCGTCC 8256 Query 1472 TCACCGGCAACGGTAAAGAGGCTGTCCTGTTCACGAACGGCTCACGGATCCTGTTCGGCG 1531 | ||| || | ||| || ||| | ||||| || |||| ||||||| | Sbjct 8255 ACCGTGGCGCAGGCGATGAGAAGATCGGTTTCGCCAACGGTTCGGTGATCATGTTCGGTG 8196 Query 1532 CCCGTGAAAAAGGCTTCGGTCGTGGTTTCGCGAAGGTCGACGTGCTGATCTTCGACGAGG 1591 | ||||| || ||||||||||| ||| | || ||| ||| ||||| ||||| |||| Sbjct 8195 CTCGTGAGCGTGGATTCGGTCGTGGCTTCCCCAACATCGGCGTCCTGATTTTCGATGAGG 8136 Query 1592 CGCAGATTCTCACCGAAAACGCAATGGACGACATGGTGCCGGCGACGAACGCGTCGCCGA 1651 | ||||| ||||| ||| || | ||||||||||| || |||| |||| || || Sbjct 8135 CCCAGATCCTCACGTCAAAAGCGCTAGACGACATGGTCCCATCGACCAACGTCGCGGTGA 8076 Query 1652 ACGCGCTAATCCTGCTGGCCGGCACACCGCCGAAGCCAACCGACCCGGGTGAGGTGTTCA 1711 || |||| || || | |||||||||||||||||| |||||| ||||| | |||| Sbjct 8075 ACCCGCTTGTCTTGACGATGGGCACACCGCCGAAGCCAGAAGACCCGAGTGAGTTTTTCA 8016 Query 1712 CCAATCTGCGG 1722 || || |||| Sbjct 8015 CCGGTCAGCGG 8005 >SEQ31283 Length=1512 Score = 149 bits (164), Expect = 3e-31 Identities = 144/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 30938 GTTCACCATCCTCGTTCACGCCACTCTTCGAGGTGGGGGCGTTCGGTGCCCAACGTGGTG 30997 |||||||| || ||| | |||||||| |||| |||||||| |||| ||| | ||||||| Sbjct 863 GTTCACCAGCCGCGTGCGCGCCACTCCGCGAGATGGGGGCGCTCGGCGCCGAGCGTGGTG 804 Query 30998 TCGTCGCCGTGCCCGGGATAGACGACCGTGCGGTCGTCGAAGCGATCAAACACCTTCGTT 31057 ||||||||||||||||| |||||||| ||| |||| || || | || ||||| || Sbjct 803 TCGTCGCCGTGCCCGGGGTAGACGACGGTGTCGTCGCCGTAGACGCCGAAGACCTTGGTC 744 Query 31058 TCAAGGTCGTTCATCAGCGAGTTGAACTGATCAGGGTGTGTTGTCCGGCCAGGACCGCCC 31117 || ||||||||||||||||| ||| | || || || || ||| || |||||||| Sbjct 743 TCCAGGTCGTTCATCAGCGACGCGAAGTCCTCGGGCTGCGTCGTCTTTCCGGGACCGCCG 684 Query 31118 GGGAA 31122 ||||| Sbjct 683 GGGAA 679 >seq353213 Length=1209 Score = 89.7 bits (98), Expect = 2e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 651 |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 446 TAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 >SEQ87579 Length=2886 Score = 89.7 bits (98), Expect = 2e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 651 ||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1477 TAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAGTCCTG 1421 >seq299611 Length=127492 Score = 86.0 bits (94), Expect = 3e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 651 |||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 57905 TAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 57961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200569703252736