Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023731.1 Length=53526 Score E Sequences producing significant alignments: (Bits) Value seq103768 444 2e-120 seq311842 217 5e-52 SEQ87579 80.6 9e-11 >seq103768 Length=2474 Score = 444 bits (492), Expect = 2e-120 Identities = 388/486 (80%), Gaps = 5/486 (1%) Strand=Plus/Plus Query 6388 GTGACCCGCCAGCGGGCGCAGTGGGTCCACGACATGGCCCGTGCTCGCAACGGCCTCCCG 6447 || ||||| |||||||||||| ||||||||| ||||||| || ||||| ||||| || Sbjct 1400 GTCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCAAGGGCCTGCCC 1459 Query 6448 TACGCCTACGGCGGCGCGTTCTCCGAAGACCCACACCGGTCCACCGACTGCTCTGGCCTG 6507 ||||||||||| ||||||||| || ||||| | | ||| ||||| ||||| |||||| Sbjct 1460 TACGCCTACGGTGGCGCGTTCACCCGCGACCCGCGCGTGTCGACCGATTGCTCCGGCCTG 1519 Query 6508 GTGCTGCAGACCGCAGCCTGGTACATGGGCCGCACCGACTGGTCCGGTAACCGCTACGGC 6567 |||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||| Sbjct 1520 GTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAAACCGCTACGGC 1579 Query 6568 TCCACCGAGAGCTTCCGGCTCGACCACAAGATCGTATACGACCTGGGGTTCAAGCGGATG 6627 |||||| ||||| || ||| || ||||||| |||||||| ||||||||||| || Sbjct 1580 AGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGTTCAAGCGCCTG 1639 Query 6628 CCGGCCGGCGGGCCAGCGGCCCTGCCGTTCAAGCCGGTCATGCTCGTCGGCCTGATGCAC 6687 ||||| ||||||| || || ||||||||||||||||| ||||||||||| ||| |||| Sbjct 1640 CCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCGGGCTGCAGCAC 1699 Query 6688 GGCGGCGGCGGGGAGAACTCGCACACCGCCTGCACGCTGATGACGATGGACATCCCCGGT 6747 ||||||||||| | ||||||||||| || |||||||| |||||||||||| | ||||| Sbjct 1700 GGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGGACGTTCCCGGC 1759 Query 6748 GGTCCGGT-GAAGATGTCCGACCGAGGCGTCGACTGGGAATCCCACGGTGGCNNNNNNNN 6806 || ||||| | || ||| | || |||||||||||||| |||| ||||| | Sbjct 1760 GGGCCGGTCGTCGA-GTCGGTGCGCGGCGTCGACTGGGAGTCCCGCGGTGAC---GGCGT 1815 Query 6807 NNNNNNNNNNNNNNNCGCACGGGCCTGGAACGACCCGCTGTTCCACGACTTCTGGTACCT 6866 ||| || ||||||||||| |||||||||||||||||||||||||| Sbjct 1816 GTATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGTTCCACGACTTCTGGTACCT 1875 Query 6867 GGACGC 6872 ||||| Sbjct 1876 CGACGC 1881 >seq311842 Length=41669 Score = 217 bits (240), Expect = 5e-52 Identities = 328/468 (70%), Gaps = 17/468 (4%) Strand=Plus/Plus Query 6427 CGTGCTCGCAACGGCCTCCCGTACGCCTACGGCGGCGCGTTCTCCGAAGACCCACACCGG 6486 ||||| ||| ||| | |||||||| | ||| ||||||||| ||||| | || Sbjct 34331 CGTGCCCGCCGAGGCTTGCCGTACGCATTCGGTGGCGCGTTCAGTACCGACCCGAAGCGC 34390 Query 6487 TCCACCGACTGCTCTGGCCTGGTGCTGCAGACCGCAGC-CTGGTACATGGGCCGCACCGA 6545 |||||||||||||| || ||||| ||||||||| || ||| | |||||||||||||| Sbjct 34391 TCCACCGACTGCTCCGGGCTGGTCTTGCAGACCGGCGCGCTGCT-GATGGGCCGCACCGA 34449 Query 6546 CTGGTCCGGTAACCGCTACGGCTCCACCGAGAGCTTCCGGCTCGACCACAAGATCGTATA 6605 |||||| || |||||||||||||| || || ||||| || || || ||| || | Sbjct 34450 CTGGTCGGGAAACCGCTACGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTT 34509 Query 6606 CGACCTGGGGTTCAAGCGGATGCCGGCCGGCGGG--CCAGCGGCCCTGCCGTTCAAGCCG 6663 |||| | || |||||||| | || ||| ||||| ||| || ||| || |||| Sbjct 34510 CGACATCGGATTCAAGCGCCTTCCCGCCAGCGGGGTCCA--AGCGCTGGGTTTTGCGCCG 34567 Query 6664 GTCATGCTCGTCGGCCTGATGCACGGCGGCGGCGGGGAGAACTCGCACACCGCCTGCACG 6723 ||||||||||||| ||| ||||||||||||||| || || |||||||| ||||| Sbjct 34568 ATCATGCTCGTCGGACTGCAGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACC 34627 Query 6724 CTGAT-GACGATGGACATCCCCGGTGGTCCGGTGAAGATGTCCGACCGAGGCGTCGACTG 6782 ||| | ||| ||| | || || ||| | | || ||| | || || ||||||| Sbjct 34628 CTGTTCTACG-CCGACGTTCCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTG 34686 Query 6783 GGAATCCCACGG---------TGGCNNNNNNNNNNNNNNNNNNNNNNNCGCACGGGCCTG 6833 ||| |||||| ||| ||| || ||||| Sbjct 34687 GGAGAGCCACGGAAACCGCAACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTG 34746 Query 6834 GAACGACCCGCTGTTCCACGACTTCTGGTACCTGGACGCCAAGCTCGA 6881 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 34747 GAACGACCCGCTGTTCCAAGACTTCTGGTACCTGGACGCCAAGCTCGA 34794 >SEQ87579 Length=2886 Score = 80.6 bits (88), Expect = 9e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 6014 TGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGAGTCCTG 6072 ||||||||| | ||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct 1479 TGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAGTCCTG 1421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170435802928128