Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_023747.1 Length=59672 Score E Sequences producing significant alignments: (Bits) Value seq276562 224 4e-54 SEQ97744 174 6e-39 SEQ87579 86.0 2e-12 >seq276562 Length=247471 Score = 224 bits (248), Expect = 4e-54 Identities = 317/443 (72%), Gaps = 2/443 (0%) Strand=Plus/Minus Query 12545 TTCAAGCTGCAGGGCCTCGGCAACGACACGCAAAAAGTCCAGAACATCATGGACAACGCC 12604 |||||| |||||| ||||||||| ||| | ||| | | ||||||| | ||| Sbjct 246967 TTCAAGTTGCAGGCCCTCGGCAATGACGCCACCGCGGTCGCGCAGATCATGGCCGCCGCG 246908 Query 12605 CTGGCCGCGGTTGATAAGACGGCGTTCGGGCTCGACGAGGCCGCCACCACAGCGGCGTCC 12664 | || | |||| | || || ||| | | ||||| || |||||||||||||| | Sbjct 246907 CAGGGCTCGGTGAAGGGCACCGCCTTCTCGATGGACGAAGCGGCCACCACAGCGGCCACG 246848 Query 12665 GCGGTGGCCGCCGGTATCGAGCCGGGCGAGCGGCTGACCGGCTACCTGAAAAGCGTCGCC 12724 ||||| |||||||| || |||| || ||| || || ||||||| | |||||| Sbjct 246847 GCGGTCGCCGCCGGGGTCAAGCCCGGTGAGGACTTGTCCAAGTACCTGACCACCGTCGCT 246788 Query 12725 GACACCGCGGCTATCGCGGGCACGTCAATGGCCGACATGGGCGCA-ATCTTCAACAAGGT 12783 || |||| || ||||||||| | |||| ||| ||||| ||| |||||||||||||| Sbjct 246787 GATGCCGCCGCGATCGCGGGCGCCGACATGGGCGATATGGG-GCACATCTTCAACAAGGT 246729 Query 12784 GCAGACCTCCGGCAAGGCGTTCACTGGCGATCTCAACATGCTTTCTGACCGTGGCCTGCC 12843 ||||||||| ||||||||| | || | || || |||||||| || || || |||| Sbjct 246728 GCAGACCTCGGGCAAGGCGATGACCGATGACCTGAACATGCTGGGCGATCGGGGATTGCC 246669 Query 12844 GATATTCACTTGGTTGCAAGAGGAATACGGCGTAACCGGCGAGGCGCTCTCGAAGATGGT 12903 ||| ||| | ||| ||||| |||||||| || ||||||| | ||| || |||||||| Sbjct 246668 GATCTTCGCCTGGCTGCAAAAGGAATACAAGGTCACCGGCGCCGAGCTGTCCAAGATGGT 246609 Query 12904 CAGCGAGGGCAAGGTCGACGCCGCGACATTCCAGAAGGTTGTTGCCGAGCGCATCGGCGG 12963 | ||||| |||| ||| | || ||||||||| || | ||| || | | ||||| Sbjct 246608 CGAAAAGGGCCAGGTTGACTCAGCCACATTCCAGCGCGTCATCGCCCAGAACGTGGGCGG 246549 Query 12964 CGCCGCTCAGGAAATGGGCGGCA 12986 |||| || | |||||||||| Sbjct 246548 TACCGCCAAGAAGATGGGCGGCA 246526 Score = 129 bits (142), Expect = 2e-25 Identities = 355/531 (67%), Gaps = 25/531 (5%) Strand=Plus/Minus Query 17701 GGTTTCATCAACCTGGCGCGCAACTACTGGCCCTTGCTGGCGCTGCCTTCG-CAGGTGAT 17759 || ||| | |||||| ||||| | |||||| || ||||||||||| | || | | Sbjct 242733 GGGTTCCTGAACCTGCTGCGCACGTTCTGGCCGTTCCTGGCGCTGCCCACCTCATGGGCA 242674 Query 17760 GAATCCCGGCGCGTGGATCGGGCAGGCGTCCAACCTCGCC---AACCTCAACCCGTTGAA 17816 || ||||| || | ||| | | || || |||| |||||| |||| || | Sbjct 242673 GA--CCCGGTGCA-----CTGGCTGAC---CACCCGCGCCGGGAACCTCTCCCCGCTGCA 242624 Query 17817 CTGGCCGGTTCAAATGCAGTTCGTCAACCCACTATTCGATCGGTCGCGCACGAGCGTGCT 17876 |||||| | || || |||||||||||||| | || |||| |||||| | ||||| Sbjct 242623 CTGGCCAATACAGATACAGTTCGTCAACCCCGTCTTGGATCAGTCGCGTAT---CGTGCC 242567 Query 17877 CAT-GTCGAGGTGGT-CGAACGC-GCACGACGTGTGCGACGCGCTGCTCAAGTACGCCGG 17933 || | || | | | || || ||||||| | || ||||| | || || | || Sbjct 242566 GATCGCCGCGAAAGCGCAAATGCTGCACGACATTCACGCACCGCTGGGCGAGGACACTGG 242507 Query 17934 -GTGTCACGTTCGCGCGTACTGCTGGCTGGAGGAGGACGAGGACAGCCCGCACCCCGAGC 17992 || || | || ||| ||| |||| |||||||| ||||||||||||||| | Sbjct 242506 CGTCGGAC-TGATCGACTACCTGTGGTTGGAAGAGGACGAAACCAGCCCGCACCCCGAAC 242448 Query 17993 TGGCGGCGATCGTCGGCGAGAAGCTCGCCAGGCCGACGCGCAACTGCATCGTGCTGGCAG 18052 |||| || |||||||||||||| ||| | || || ||||||||||||||||| || Sbjct 242447 TGGCCGCACTCGTCGGCGAGAAGGCCGCTCGCCCCACACGCAACTGCATCGTGCTCGCCT 242388 Query 18053 TCGAGGACATGAGCGGCACGACCGGGGTCACCGGCACGGCGATCGACGGCGTGCTCGACC 18112 |||| |||| | || | ||||| ||||| || ||| |||||||| || || Sbjct 242387 TCGAAGACAAGTCAGGAATCACCGGCCCTACCGGGACAGCGGCCGACGGCGCTCTGAACG 242328 Query 18113 TCATTGCAGTG-TC--GGCCGACAACATTCTCAGCACCCTGGTGCACGTCGACCGTGACG 18169 ||| | | | || || |||| ||| | | | ||| | | ||| |||| Sbjct 242327 CCATCGGCGCGATCCTGGATGACACCATCACCGAGGTCATCTTGCCCTTGGACGAGGACG 242268 Query 18170 GCGACGGCGTGGACGATCCGTTTATCCGCAAGCTGCTGGGCGTCGCCCCGG 18220 |||||||| | ||||||||| |||| |||||| || || ||||||| Sbjct 242267 GCGACGGCCTCACCGATCCGTTCTTCCGTCGGCTGCTCGGGGTGGCCCCGG 242217 >SEQ97744 Length=86731 Score = 174 bits (192), Expect = 6e-39 Identities = 381/561 (68%), Gaps = 15/561 (3%) Strand=Plus/Minus Query 1665 TGGCCGTCCGTT--CGCCACGAGTGCAACGTCAACATGGGGTTGTATTTCGACCAATGGC 1722 ||||||||| | |||||| ||||| | | ||||| | | ||||| | |||| Sbjct 8565 TGGCCGTCCATCTGCGCCACA--TGCAAAG---AGATGGGCATCGAGTTCGATGACTGGC 8511 Query 1723 AGGACGACCTCGGAAAGCTGGTATGCGCCAAGCGATCCGACGGCCTGTACGCCGCCGACA 1782 | |||| ||| || ||| | | |||||||| ||||||||||||||||| | |||| Sbjct 8510 AAGACGGCCTGGGTCGCCTGATCTTGGCCAAGCGCGCCGACGGCCTGTACGCCTCGGACA 8451 Query 1783 TGTTCGCAATGTCGATCCCGAGGCAGACAGGCAAGACCTACTTTCTCGGCGCGATCGTGT 1842 | || || || ||||| ||||| | || ||||| | | | ||||||| ||||||| Sbjct 8450 CGACGGCGATCTCAATCCCCCGGCAGTCCGGGAAGACTTTCCTCATCGGCGCCATCGTGT 8391 Query 1843 TTGCCCTCTGCAAGATGACTCCCGGTACAACGGTCATCTGGACGGCGCACCGGACACGTA 1902 | || || |||| | | ||| || |||||||||||| ||||||| | | Sbjct 8390 TCGCGCTGTGCATCAAGTATCCGGGCCTGCGGGTCATCTGGACCGCGCACCTGTTCAAAA 8331 Query 1903 CGGCCGCTGAGACGTTCAAGAGTATGCAGGCGCTCGCCAAGC-GCGAGCAGATCGCCCCG 1961 |||| ||| || ||| || ||||||||| | |||| || | | || ||| Sbjct 8330 CGGCGCGTGAAACTTTCGAGTCGATGCAGGCGACATCGAAGCTGCCCGGCG-TCAAGCCG 8272 Query 1962 CACATCTTGAACGTGCACACGGGCAACGGCAA--AGAAGCCGTGTTGTTCACCAACGGCA 2019 ||||| ||| ||| ||| ||| | ||||| ||| || ||||||| Sbjct 8271 TACATCGATTTCGTCCACCGTGGCGCAGGCGATGAGAAGATCGGTT--TCGCCAACGGTT 8214 Query 2020 GCCGAATCCTGTTCGGCGCTCGTGAGAAAGGTTTCGGCCGCGGTTTCGCCAAGGTCGACG 2079 ||| ||||||| ||||||||| || ||||| || || ||| |||| ||| || Sbjct 8213 CGGTGATCATGTTCGGTGCTCGTGAGCGTGGATTCGGTCGTGGCTTCCCCAACATCGGCG 8154 Query 2080 TTCTGATTTTCGACGAGGCTCAGATCCTCA-GTGAAAACGCAATGGACGACATGGTTCCG 2138 | ||||||||||| ||||| |||||||||| || |||| || | ||||||||||| || Sbjct 8153 TCCTGATTTTCGATGAGGCCCAGATCCTCACGTCAAAA-GCGCTAGACGACATGGTCCCA 8095 Query 2139 GCGACCAACGCCTCGCCTAACGGTCTGATCCTGTTCGCGGGCACCCCGCCGAAGCCGACA 2198 ||||||||| | || ||| || || || |||||| ||||||||||| | Sbjct 8094 TCGACCAACGTCGCGGTGAACCCGCTTGTCTTGACGATGGGCACACCGCCGAAGCCAGAA 8035 Query 2199 GATCCCGGCGAGGTGTTCACC 2219 || || | ||| | |||||| Sbjct 8034 GACCCGAGTGAGTTTTTCACC 8014 Score = 116 bits (128), Expect = 1e-21 Identities = 123/160 (77%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 59389 TGCGGCGAGCCGATCGACTACGAGGCGCATCACCTGCACCC--TGACTCGTTTCAGGTTG 59446 |||||||| || ||||||||||| | ||||||| ||||| ||| | | || || | Sbjct 9579 TGCGGCGAACCCATCGACTACGACGTCGATCACCTACACCCCCTGAGT--TACCAAGTGG 9522 Query 59447 ACCACATCACGCCACTGGACGCAGGCGGCTCGGACACGCTCGACAACACGCAGCCGACGC 59506 ||||| ||| |||||| | || ||| |||||||||||| ||| | | ||| ||| Sbjct 9521 ACCACGTCATTCCACTGTCCAAGGGTGGCGCGGACACGCTCGCCAATAAGGTGCCATCGC 9462 Query 59507 ACCGCAAGTGCAACCGCGACAAGAGCAACAAGCTGCCCGA 59546 | || ||||||||||| ||||||||| ||||||||||||| Sbjct 9461 ATCGAAAGTGCAACCGGGACAAGAGCGACAAGCTGCCCGA 9422 >SEQ87579 Length=2886 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 994 GGCGCGCCTG-GGTGTGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGC 1052 |||||||| || |||||||||| | ||||||||||||||||||||| |||| ||| || Sbjct 1494 GGCGCGCCGAAGGGGTGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGC 1435 Query 1053 ACGTTCGAGTCGTGCCGCGCCCGC 1076 | ||||||||| || ||| || || Sbjct 1434 AGGTTCGAGTCCTGTCGCCCCTGC 1411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190019605739904