Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_024330.1 Length=37380 Score E Sequences producing significant alignments: (Bits) Value seq219735 131 4e-26 seq145801 86.0 1e-12 >seq219735 Length=5934 Score = 131 bits (144), Expect = 4e-26 Identities = 582/907 (64%), Gaps = 55/907 (6%) Strand=Plus/Minus Query 14154 TTGGCTCGCATCTTGATCGAGGCCGAGCAGGGTCAACTCCAGGCTCAGGCCGAGTTGTTC 14213 ||| | |||||| || ||||||||||||||| | || || ||||| || |||| Sbjct 2028 TTGCCGCGCATCATGCAGGAGGCCGAGCAGGGTTATCTTTCCGCGCAGGCGGACCTGTTT 1969 Query 14214 ATGGACATGGAGGAACGCGACGCCCACCTGTTCGCCGAAATGAGCAAGCGC--AAGCGCG 14271 |||||||| ||| |||| |||| | ||| | || ||| ||||||| || |||| Sbjct 1968 GAGGACATGGTGGAGAAAGACGGCCACATCTTCTCAGAGATGGCCAAGCGCAAAAACGCG 1909 Query 14272 CTGTCCTCGGCCTGGACTGGACCATCGAGCCGCCGCGCAACGCCTCGGCCGCAGAGAAGG 14331 |||| | ||||| ||||||| ||| || | | ||||||||| | ||| ||| || Sbjct 1908 CTGT--TGGGCCTCGACTGGAGCATTGAAACCCGCCGCAACGCCACTCCCGAGGAGCAGA 1851 Query 14332 CCGACGCGGAGTATCTCCACGAGCTGCT------GCTCG---ACCTGGAGGGCATTGAAG 14382 | ||||| | || ||| | | ||||| ||||||||| ||| Sbjct 1850 ACCTCGCGGCCATGGTGCAGGAGTGGTTCGATACGCTCGACAACCTGGAGGATATT---- 1795 Query 14383 ACCTCATGCTCGATTGCATGGACGGCGTCGGCCACGGCTATAGCGCTATCGAGCTGGACT 14442 || ||| | || ||||| | |||||||||| | ||| | |||||||| | Sbjct 1794 --ATCCTGC-AGGCGGC--GGACGCCATCGGCCACGGGTTCAGCTGTCAGGAGCTGGAGT 1740 Query 14443 GGTCGCTCCAGGGGCGGGAGTGGTTGCCGCAGGCCTTCGACCACCGGCCGCAGAGCTGGT 14502 || | | | | ||| | ||| || | ||| || ||||| |||||| Sbjct 1739 GGGAAAACGAAGAGGATATCTGGCTCCCGTCTACCGCCCACCTGCGCCCGCACCGCTGGT 1680 Query 14503 TTCAACTGAACCCGGACGACCAGGACGA-GC--TGCGCCTGCGCGATAACAGCATCGCGG 14559 | || | ||| || || ||| || | ||||| |||| |||||||| || Sbjct 1679 TCCAGGCGCGTCCG---GATATGGGCGATGCTATCCGCCTTTCCGATGGCAGCATCGAGG 1623 Query 14560 GCGAGGTACTCCAGCCGTTCGGCTGGATCATGCACAAGC-CGCGTTCGC--GCTCGGG-- 14614 ||| | |||| ||||||||||||||| ||||||||| ||| ||| |||| Sbjct 1622 GCGCTGAACTCTGGCCGTTCGGCTGGATGGTGCACAAGCACGC---CGCCAAAACGGGCT 1566 Query 14615 ATACGTGGCGCGTAGCGGGCTGTTCCGGGTACTGGCCTGGCCGTACCTGTTCAAGCACTA 14674 ||| || || || || | ||| || |||| ||||||||||||||||||| ||| Sbjct 1565 TTAC-CGGACAGT-CTGGCCTTTACCGCGTGCTGGTCTGGCCGTACCTGTTCAAGAACTT 1508 Query 14675 CTCCACGGCCGACCTAGCGGAAATGCTCGAAATCTACGGTCTGCCGATCCGGCTCGGGAA 14734 |||| ||||| ||||| | || || || ||||||||||| || |||| | Sbjct 1507 TGCCACCCGTGACCTTGCGGAGTTCCTGGAGATTTACGGTCTGCCCGCGCGCGTCGGCAC 1448 Query 14735 GTACCCGCCCGGCACGCCCGACGAAGAGAAGGTAACCCTGCTGCGAGCCG-TGACCGGCC 14793 ||| | |||| | |||| | || |||| | || || ||| || || | Sbjct 1447 CTACATGGCCGGGGCCACCGAAGGCGACAAGGACGCGCT-CTATGAGGCGCTGGTGATGC 1389 Query 14794 TCGGCCATGCCGCAGCGGGCATCATCCCCGAGAGTATGTCTATCGACTTCCAGGAAGCGT 14853 | |||||| |||| ||||||||||||| || | | || || ||| || || Sbjct 1388 TGGGCCATAACGCATCGGGCATCATCCCACAGGGCACCAGCATTGAGTTCAAGACGGCCG 1329 Query 14854 CGAAAGGCTCGGCCGAGCCGTTCATGGCCATGATGCGCTGGTGCGATGACTCGATGTCGA 14913 | | || ||| || |||||| | |||||||| ||||||||| | || | | Sbjct 1328 CCAGCGGTCAGGCTGACCCGTTCGTCGCCATGATTGACTGGTGCGAGCGCACGCAGAGTA 1269 Query 14914 AGGCCATCCTGGGCGGCACGCTCACCAGCCAGACCAGCGAGTCGGGCGGTGGTGCCT--- 14970 ||| ||| || || | |||||| ||||||| || ||| |||| ||| Sbjct 1268 AGGTCATTCTCGGTGCCACGCT---------GACCAGCCAGGCGGACGGTAAAACCTCCA 1218 Query 14971 ---ATGCCCTGGGGCAGGTCCATAACGAGGTGCGCCATGACCTACTGGCTGCGGATGCCC 15027 | || || || | || || ||||| |||||||| ||| | ||| || ||||||| Sbjct 1217 CCAACGCGCTCGGCAACGTGCACAACGACGTGCGCCACGACATTCTGATCGCCGATGCCC 1158 Query 15028 GCCAGCT 15034 ||||||| Sbjct 1157 GCCAGCT 1151 Score = 100 bits (110), Expect = 7e-17 Identities = 324/497 (65%), Gaps = 26/497 (5%) Strand=Plus/Minus Query 11738 ATGGCGCACCCGAAGGAAACCCGCGACGCCCTGCGCCGCGCCTACGTCCTCGACCGCCAG 11797 |||||||| ||| ||||||| || ||| ||||| || | ||| | ||| || | Sbjct 5837 ATGGCGCATCCGCAGGAAACACGGGACAGGCTGCGACGTTCGTACATTTTCGGCCAGATG 5778 Query 11798 TCCCTGGAGGTCGCGGCCGCCATGTTCGGCGTCTCCTATGGCACCGCTCGCCGCTGGAAA 11857 || || ||| | || | || | ||| || | | || || || ||||| |||||| Sbjct 5777 TCGCTTGAGATTGCCTCGGCACAGGCCGGGGTGGCGTTTGCGACGGCGCGCCGATGGAAA 5718 Query 11858 CAGCAGGCGGAAGCCGAGGGGGACGACTGGGACAGGGCGCAATCGGCGCAGTTGCTGGCC 11917 || | || | | | ||| ||||||||||||| | || | ||||| ||||||| Sbjct 5717 AAGGATGCTCAGGATGCGGGTGACGACTGGGACAAGCTGCGGGCCGCGCACGTGCTGGCA 5658 Query 11918 GGTGGCGGACTGGAGGACGTGGCGCGCCAGGTGCTGGCCGGCCTGGTGACTCAGTTTCAG 11977 || ||||| |||||||| | | || ||||||| | ||||||| || |||| |||| Sbjct 5657 GGCGGCGGGCTGGAGGATATTGGCCGTGCGGTGCTGACAAGCCTGGTCACGCAGTATCAG 5598 Query 11978 GCCACCATGGAGGCGATCCAGGTGGACAGCG-CGATCACGCCAGCGGTCAAG-----GTG 12031 |||| ||||| ||| | || || |||| || | || | ||| ||| Sbjct 5597 ACCACGCTGGAG------CAGCTCACCACCGCCGATAACATCGGCCCTAAAGAGCGCGTG 5544 Query 12032 CAGATGCTCGCCAGCCTGGCCGACGCCTACAACAAGTCGATCAGCGCATCGAAGCG---G 12088 || |||| || ||||| || || || | |||||| | || ||| ||| || Sbjct 5543 GAGCTGCTGGCAAGCCTCGCGGATGCATTTAACAAGGC---CACGGCAGCGAGCCGCAAA 5487 Query 12089 GTACTACCGGAAACC-TCCAGCCTGGCCACTGCAATGGAAGTCATCCAGCGCCTGGCGGC 12147 | || || |||||| ||| || |||||||| | || || | ||||||||| | Sbjct 5486 ATCCTGCCTGAAACCAGTCAG-CTTGCCACTGCGCTCGACGTGCTGCAGCGCCTGAGTAC 5428 Query 12148 CTTCATCCGTGAACAGT---TCCCGCAGCACGTCCAGGCCTTCGCCGAGATTCTGGAGCC 12204 ||| | | | |||| ||| |||| | ||| |||| |||||||||||||| Sbjct 5427 CTTTGTGC---AGCAGTCGCATCCGAAGCATCTGGCGGCGTTCGTGGAGATTCTGGAGCC 5371 Query 12205 GTTCGGGGAAGTAGTCG 12221 ||| || | || | ||| Sbjct 5370 GTTTGGCGCAGAAATCG 5354 >seq145801 Length=1636 Score = 86.0 bits (94), Expect = 1e-12 Identities = 197/290 (68%), Gaps = 14/290 (5%) Strand=Plus/Plus Query 20534 CGGACAACACCCCGAACCCCTACGTCGGCACTGCTGAG---CTGGTAGTGGACGGGCGTA 20590 |||||||||| ||||| ||||| || || || || ||||| |||| |||| | Sbjct 3 CGGACAACACGCCGAATACCTACAAGGGTACGGCGAAGGTGCTGGT-GTGGCCGGG--TC 59 Query 20591 TCGAGTCCGACACCGCCTGGTTCCTGCTGGACACCACCAAGCCGGTAAAACCGTTCATCT 20650 ||| |||| |||| |||| |||| | ||| | ||||||||| || ||| | | | Sbjct 60 TCGCCACCGATACCGAATGGTACCTGTTTGACGTGAGCAAGCCGGTGAAGCCGATTGTGT 119 Query 20651 TCCAGCCCAGGAAGCAGCCGGAATTCGTTTCCCAGGTCAACCTGGATTCGGATGACGTCT 20710 ||| | || |||||| |||||| ||| || |||| ||| | || | Sbjct 120 ATCAGGAGCGTAAAAAGCCGGTATTCGTCGAGCAGACGGACATGGACAGCGATCAGGTGT 179 Query 20711 TCAACCTGCGCAAGC---TGAAGTTCGGCGCCGAAGCCCGCGCTGCTGCCGGTTACGGCT 20767 || ||| |||| | || || || |||||||||||| || | ||||| |||| Sbjct 180 TC---CTGAACAAGAAATTCAAATTTGGTGCCGAAGCCCGCTCTAACGGTGGTTATGGCT 236 Query 20768 TCTGGCAGCTGGCCTATGGCTCCACCGGCACTGG-CGCATAAGGGGGCAG 20816 |||||||| |||| | ||||| ||||| | ||| ||||||| ||| ||| Sbjct 237 TCTGGCAGATGGCATTCGGCTCAACCGG-AGTGGACGCATAATGGGTCAG 285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118987693556352