Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_024366.1 Length=62661 Score E Sequences producing significant alignments: (Bits) Value seq276562 241 5e-59 SEQ55377 196 2e-45 SEQ97744 145 3e-30 seq353213 93.3 2e-14 SEQ87579 91.5 6e-14 seq299611 87.8 7e-13 >seq276562 Length=247471 Score = 241 bits (266), Expect = 5e-59 Identities = 325/450 (72%), Gaps = 16/450 (4%) Strand=Plus/Minus Query 12617 TTCAAGCTGCAGGGTCTCGGCAA------CACTGCGGAGCAGGTGCAGTCCATCATGGAC 12670 |||||| |||||| |||||||| ||| |||| | |||| ||||||| | Sbjct 246967 TTCAAGTTGCAGGCCCTCGGCAATGACGCCACCGCGGTC---GCGCAG---ATCATGGCC 246914 Query 12671 AACGCGCTGGCTGCGGTGAAGGGCACGGCGTTCGGGCTCGACGAGGCCGCGACAACGGCA 12730 ||||| || ||||||||||||| || ||| | | ||||| || || || || || Sbjct 246913 GCCGCGCAGGGCTCGGTGAAGGGCACCGCCTTCTCGATGGACGAAGCGGCCACCACAGCG 246854 Query 12731 GCGTCCGCGGTGGCCGCCGGAATCAAGCCCGGGCAGCAGTTGACCGACTATCTGAAGCTC 12790 || | ||||| |||||||| |||||||||| || | ||| || | || |||| | Sbjct 246853 GCCACGGCGGTCGCCGCCGGGGTCAAGCCCGGTGAGGACTTGTCCAAGTACCTGACCACC 246794 Query 12791 GTCGGCGACACTGCGGCGATCGCCGGCACGTCGCTGGCTGACATGGGCGCGATCTTCAAC 12850 |||| || | || |||||||| ||| | ||| || ||||| ||||||||| Sbjct 246793 GTCGCTGATGCCGCCGCGATCGCGGGCGCCGACATGGGCGATATGGGGCACATCTTCAAC 246734 Query 12851 CGGGTGCAGACGTCGGGCAAGGCGTTCACGGGTGACCTGAACCAGCTCGCCGACCGCGGT 12910 ||||||||| |||||||||||| | || | |||||||||| ||| | ||| || || Sbjct 246733 AAGGTGCAGACCTCGGGCAAGGCGATGACCGATGACCTGAACATGCTGGGCGATCGGGGA 246674 Query 12911 TTGCCTGTATTCCAATGGCTGCAAGAGGAATACGACGTCAGCGGCGCGAAGCTGTCGAAG 12970 ||||| | ||| ||||||||| |||||||| | |||| |||||| ||||||| ||| Sbjct 246673 TTGCCGATCTTCGCCTGGCTGCAAAAGGAATACAAGGTCACCGGCGCCGAGCTGTCCAAG 246614 Query 12971 ATGGTCGAGAAGGGCAAGATTGACGCCGCGACGTTCCAGCGGGTTGTCG--CTGAACGTA 13028 |||||||| |||||| || ||||| | || || |||||||| || ||| | ||||| Sbjct 246613 ATGGTCGAAAAGGGCCAGGTTGACTCAGCCACATTCCAGCGCGTCATCGCCCAGAACG-- 246556 Query 13029 TCGGTGGCGCCGCGCAGAACATGGGCGGCA 13058 | || || |||| |||| |||||||||| Sbjct 246555 TGGGCGGTACCGCCAAGAAGATGGGCGGCA 246526 Score = 104 bits (114), Expect = 9e-18 Identities = 167/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 18315 GAGGACGAGGACAGTCCGCACCCTGAGCTGGCGGCGCTGGTCGGCCAAAAGCTGGCGCGG 18374 |||||||| ||| |||||||| || ||||| || || |||||| | ||| || || Sbjct 242475 GAGGACGAAACCAGCCCGCACCCCGAACTGGCCGCACTCGTCGGCGAGAAGGCCGCTCGC 242416 Query 18375 CCGACGCGGAACTGCATTGTGCTGGCGGTAGAGGACAATTCGGGCGTTACCGGCCCGACC 18434 || || || |||||||| ||||| || | || ||||| || || | |||||||| ||| Sbjct 242415 CCCACACGCAACTGCATCGTGCTCGCCTTCGAAGACAAGTCAGGAATCACCGGCCCTACC 242356 Query 18435 GGCACGGCGCTCGACGGTGCGTTGGATCTGATCGCGGCGAC---GGGTGACAATCTGATC 18491 || || ||| |||||| || || | |||| |||| || ||||| ||| Sbjct 242355 GGGACAGCGGCCGACGGCGCTCTGAACGCCATCGGCGCGATCCTGGATGACACC---ATC 242299 Query 18492 ACTGAGACGTTGTTCCCGATCGACCGGGACGGCGACGGCGAGACAGATCCGTTCATCCG 18550 || ||| | || || | ||| ||||||||||||| || ||||||||| |||| Sbjct 242298 ACCGAGGTCATCTTGCCCTTGGACGAGGACGGCGACGGCCTCACCGATCCGTTCTTCCG 242240 >SEQ55377 Length=3000 Score = 196 bits (216), Expect = 2e-45 Identities = 450/665 (68%), Gaps = 31/665 (5%) Strand=Plus/Minus Query 31370 CGTTCTGTCGCGGATCAGGAAACCGAGAACCGTGCCATATGCGAACGCAACGGCTGGACG 31429 || || |||| ||| |||||| |||| ||| | |||| || | ||||||||| Sbjct 1149 CGATCCGTCGAGGAGCAGGAACGCGAGTGCCGCGAATGGTGCGCGCGGCAGGGCTGGACG 1090 Query 31430 ATCGGCGAAGTGCTCACCGACAACGAC--CGGTCAGCGACGCGGTTC-GCGACACGGGAG 31486 || | || ||| | ||||||||| ||| |||| |||| | ||| | || | Sbjct 1089 GTCACCCGGGTCCTCGCTGACAACGACATCGGC--GCGAGCCGGTACAGCGGAAAGG-AC 1033 Query 31487 CGGCCTGAGTATCGCCGGCTGACGGAGATACTGCAGCGCGGCGACGTCCTCGTCACCTGG 31546 ||||| | || || ||| | | | |||| || || ||||| |||||||||||| Sbjct 1032 CGGCCGGCCTACCGGGAACTGCAGTCGGTCCTGCGGCCGGGTGACGTGCTCGTCACCTGG 973 Query 31547 GAGGCTTCGCGCGCGCAACGTGACCTTGAGGCGTACGTCGCGCTGCGCAACCTGTGCGCC 31606 ||||| ||||||||||| |||||||| | || ||||| |||||| ||||||||||| Sbjct 972 GAGGCGTCGCGCGCGCAGCGTGACCTCGCCGCCTACGTGCAGCTGCGTGACCTGTGCGCC 913 Query 31607 GAACGGGGCGTGCTGTGGTGCTACAGCGGCAAGGTGTACGACCTCACGGTCGGCGACGAC 31666 || || |||| |||| |||| |||| ||||||||||||||||| ||| ||||| Sbjct 912 GACATCGGTGTGCGGTGGGCGTACACCGGCCGGGTGTACGACCTCACGGACGGTGACGAT 853 Query 31667 CGGTTCGTCACCGGCCTTGACGCGTTGCTTGCGGAGAAGGAAGCAGAGCAGACACGCGAA 31726 |||||| |||||| || || ||| | || || |||||||| || ||||||| || | Sbjct 852 CGGTTCTCCACCGGGCTCGATGCGCTCCTCGCCGAGAAGGAGGCCGAGCAGATCCGGGCT 793 Query 31727 CGGATCATGCGCGGCCATCGCACCAACCTCGCGGC--CGGCGGTGCGCACGGACATGTAC 31784 ||| | | ||||| | || | |||||| |||| || | ||| | | Sbjct 792 CGGGTGCTTCGCGGTAAGCGGTC------CGCGGCGATCGCGGGACGACCCCACAGTTTC 739 Query 31785 ----CGTTCGGCTACCGCATTGTGCGTGACCCGACAACCGGCCGGCCGTTGCAGCGTGTG 31840 |||||||||||| ||||| || ||| |||||||| || | ||||| | Sbjct 738 GCGGCGTTCGGCTACCAGCCGGTGCGGGATCCGCAGTCCGGCCGGACG--GTCGCGTGGG 681 Query 31841 -CCCGACGAAGCGACGGCGCCGCTGGTGCAGGAAGCTGCGCGCCGCGTGCTGGCCGGCGA 31899 ||| || || ||||||||| |||||| || ||||| | ||||||| ||| | Sbjct 680 AGCCGTCG--CCGGATGCGCCGCTGCTGCAGGCCGCGGCGCGGAGGGTGCTGGACGGGGC 623 Query 31900 GTCAGTGCGGTCGATCGTCGC-TGACCTGAAAGTGCGCACACCGGGCAAGCCGTGGAGCA 31958 | | ||||| || | ||| | | ||| | | ||| |||| |||||| | | Sbjct 622 GCCGCTGCGGGCGGT-GTCTCGTTGGCTG--GGGGAGCA----GGGCGCGCCGTGCACCC 570 Query 31959 CGAGCACGCTGCGTCGCATGCTGATGAATCCGACGTATGCGGGGTATCGCACGCACCGCG 32018 || |||||||| | | || |||| ||||||||||||||| || |||||| | Sbjct 569 ATAGGACGCTGCGGGACCGGTTGCTGAACCCGACGTATGCGGGGCTGCGGGTGCACCGGG 510 Query 32019 GCGAG 32023 | ||| Sbjct 509 GGGAG 505 >SEQ97744 Length=86731 Score = 145 bits (160), Expect = 3e-30 Identities = 340/512 (66%), Gaps = 6/512 (1%) Strand=Plus/Minus Query 1441 TTCGATCAGTGGCAGGACGACCTCGGGAAGCTGGTTTGCGCCAAACGATCCGACGGTCTG 1500 |||||| | ||||| |||| ||| || ||| | | ||||| || ||||||| ||| Sbjct 8523 TTCGATGACTGGCAAGACGGCCTGGGTCGCCTGATCTTGGCCAAGCGCGCCGACGGCCTG 8464 Query 1501 TTCGCGGCCGACATGTTCGCGATGTCGGTGCCACGTCAGACAGGCAAAACGTACTTCCTC 1560 | ||| | |||| | ||||| || | || || ||| | || || || | | || || Sbjct 8463 TACGCCTCGGACACGACGGCGATCTCAATCCCCCGGCAGTCCGGGAAGACTTTCCTCATC 8404 Query 1561 GGTGCGCTGGTGTTCGCGCTGTGCAAGATGAACGCCGGCACGACGGTGATCTGGACTGCG 1620 || || | |||||||||||||||| | | | | ||| | ||| |||||||| ||| Sbjct 8403 GGCGCCATCGTGTTCGCGCTGTGCATCAAGTATCCGGGCCTGCGGGTCATCTGGACCGCG 8344 Query 1621 CACCGCACCCGCACCGCGGCCGAAACGTTCAAGAGCATGCAGGCGCTCTCG---CTGCGC 1677 |||| | || ||| ||||| ||| || ||||||||| ||| |||| | Sbjct 8343 CACCTGTTCAAAACGGCGCGTGAAACTTTCGAGTCGATGCAGGCGACATCGAAGCTGCCC 8284 Query 1678 GAAGAGATCGCACCGCACATCGAGCAGGTTCTCACCGGCAACGGTAAAGAGGCCGTGCTG 1737 | | || ||| ||||||| || | | ||| || | ||| | Sbjct 8283 GGCG---TCAAGCCGTACATCGATTTCGTCCACCGTGGCGCAGGCGATGAGAAGATCGGT 8227 Query 1738 TTCACCAACGGTTCTCGAATCCTGTTCGGCGCCCGCGAAAAGGGCTTCGGTCGTGGTTTC 1797 ||| |||||||||| ||| ||||||| || || || || ||||||||||| ||| Sbjct 8226 TTCGCCAACGGTTCGGTGATCATGTTCGGTGCTCGTGAGCGTGGATTCGGTCGTGGCTTC 8167 Query 1798 GCGAAGGTCGACGTGCTGATTTTCGACGAGGCGCAGATTCTCACCGAGAACGCAATGGAC 1857 | || ||| ||| ||||||||||| ||||| ||||| ||||| || || | ||| Sbjct 8166 CCCAACATCGGCGTCCTGATTTTCGATGAGGCCCAGATCCTCACGTCAAAAGCGCTAGAC 8107 Query 1858 GACATGGTGCCGGCGACGAACGCGTCACCTAACGCGCTGATCCTGCTGGCCGGCACACCG 1917 |||||||| || |||| |||| | ||| |||| || || | ||||||||| Sbjct 8106 GACATGGTCCCATCGACCAACGTCGCGGTGAACCCGCTTGTCTTGACGATGGGCACACCG 8047 Query 1918 CCGAAGCCGACCGATCCCGGTGAGGTGTTCAC 1949 |||||||| || || ||||| | ||||| Sbjct 8046 CCGAAGCCAGAAGACCCGAGTGAGTTTTTCAC 8015 Score = 114 bits (126), Expect = 5e-21 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 31538 GTCACCTGGGAGGCTTCGCGCGCGCAACGTGACCTTGAGGCGTACGTCGCGCTGCGCAAC 31597 || || |||||||||||||| || || || |||||| ||| || || | ||| || | Sbjct 22701 GTGACTTGGGAGGCTTCGCGAGCTCAGCGCGACCTTCGGGCTTATGTAGAGCTTCGAGAT 22642 Query 31598 CTGTGCGCCGAACGGGGCGTGCTGTGGTGCTACAGCGGCAAGGTGTACGACCTCACGGTC 31657 |||||| || || || || |||||| |||||| || | || ||||| || Sbjct 22641 CTGTGCTTTGAGCGTGGAGTTTTGTGGTCCTACAGTGGACGGACGTTTGACCTGGCGCAG 22582 Query 31658 GGCGACGACCGGTTCGTCACCGGCCTTGACGCGTTGCTTGCGGAGAAGGAAGCAGAGCAG 31717 || ||||||||||||| |||||||| || ||| |||| |||||||| ||||| |||||| Sbjct 22581 GGTGACGACCGGTTCGGAACCGGCCTGGATGCGCTGCTCGCGGAGAAAGAAGCTGAGCAG 22522 Query 31718 A 31718 | Sbjct 22521 A 22521 >seq353213 Length=1209 Score = 93.3 bits (102), Expect = 2e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 827 GGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 885 |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 448 GGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 >SEQ87579 Length=2886 Score = 91.5 bits (100), Expect = 6e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 828 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 885 |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1478 GTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAGTCCTG 1421 >seq299611 Length=127492 Score = 87.8 bits (96), Expect = 7e-13 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 828 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 885 ||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 57904 GTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 57961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199518298975296