Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq342797 187 2e-42 seq343166 140 2e-28 seq282189 96.9 2e-15 seq344911 82.4 5e-11 >seq342797 Length=99442 Score = 187 bits (206), Expect = 2e-42 Identities = 252/346 (73%), Gaps = 5/346 (1%) Strand=Plus/Minus Query 97497 ATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGAT-GGCACCCCGCGCCCCCACGGG 97555 |||||| |||||| | ||| || ||||| || || || ||| |||| || |||| || Sbjct 65829 ATCTCTTCGTCGGTGATGAAGGCACCCTGCATGCGAATCGGCCGCCCG-GCGCCCATCGG 65771 Query 97556 CAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCAC 97615 |||||| | ||||||||||| || ||||||| |||||| || | ||||||||| || Sbjct 65770 CAGGAACAGTCCGTCACCCATACCGATGAGCTTCTCGGCACCTGGTTGGTCCAGGATGAC 65711 Query 97616 CCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGAT 97675 ||||| || || || |||| || || || | || | || ||||| || | ||||| Sbjct 65710 GCGGCTGTCAGTCAGCGATGACGTCGCAAAGGCAAGGCGCGAAGGCACATTCGTCTTGAT 65651 Query 97676 AAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGC 97735 || || ||||| || ||||| || || ||||| || ||||| || || || || ||||| Sbjct 65650 CAGACCGGTGACCACGTCCACCGACGGACGCTGGGTGGCCAGCACCAGGTGGATGCCGGC 65591 Query 97736 TGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCC 97795 ||||| |||||||||| |||||| || ||| | ||||||| || | | | || Sbjct 65590 CGCGCGTGCCTTCTGGGTGATGCGCACGATGGCGTCCTCGACGTC--ACGAGGCG-CGGT 65534 Query 97796 CATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97841 |||||||||||| || | |||||||| || | | ||| ||||| Sbjct 65533 CATCATGAGGTCGGCCAACTCGTCGACGACGGCGAGAATGAAGGGG 65488 Score = 172 bits (190), Expect = 4e-38 Identities = 321/474 (68%), Gaps = 17/474 (4%) Strand=Plus/Minus Query 97968 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 98027 ||||| || ||||| | ||| || || ||||||||||||||||||||||||| ||| | | Sbjct 65301 AGGTGCGGAATACCTTCGTAGGGTGTCAGTTCCACCATCTTCGGGTCGATCAGGATCATC 65242 Query 98028 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 98087 ||||| || ||| |||| ||| |||| || || ||||||||||||| |||||| Sbjct 65241 CTGACCTCCTCCGGAGTGGCGCGGGCCAGCAGTGAGACGAGCATCGAGTTGACGAAGCTC 65182 Query 98088 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGTTCAGG 98147 ||||| ||||| ||||||| || || ||||||||||| ||||| ||||||||||| | Sbjct 65181 GACTTACCCGAACCGGTGGAACCGGCAACCAGCAGGTGCGGCATCTTGGCCAGGTTGGCG 65122 Query 98148 GAAACGTCGTTACCCTCGACNNNNNNNNNNACGGCGACGGTGAGCGGGTGGTCATCC--- 98204 |||| | || ||||||| | | ||| ||||| |||| |||| Sbjct 65121 GAAATGAAGTCGCCCTCGATGTCCTTGCCCAGGCCGATCAACAGCGGATGGTGATCCGTG 65062 Query 98205 ------TCGGGGACGATCTGC------TGCAACCGCACGGTCTGGCGTTCCGACCGGGGG 98252 ||||| || || || || ||||| ||| || || | || Sbjct 65061 CGGGTTTCGGGTGCGGTCAGCACATCGGCCAGTCGCACCATCTCCCGATCGGTATTCGGC 65002 Query 98253 AGTTCGATTCCTACGGCCGTTTTACCGGGGATGGGTGCAACCACCCGGACGCTCTCTGTT 98312 | ||||| || || |||| || |||||||| || |||| || || ||||| || || Sbjct 65001 ACCTCGATGCCGACCGCCGACTTGCCGGGGATCGGCGCAAGCAGGCGCACGCTGTCGGTG 64942 Query 98313 GCGAGCGCGTAGGCCA-ACTGAGACTGTAGTTGTGAGACTTTCTGGATGCGCACACCGGG 98371 || | |||||| || | | || | || || | || ||||| | || ||||| Sbjct 64941 GCCACCGCGTACGCGATATTGCG-TTGCAGGGCGGTGATTTTCTCCACCTTGACGCCGGG 64883 Query 98372 CCCCAACGCAATCTCGTAGCGCGTGACGCTCGGCCCGTCGGTGCGACCGGTTAC 98425 || | | ||| |||||||||||||||| | || || | || |||||| || Sbjct 64882 GCCGAGCTCAACCTCGTAGCGCGTGACGGTGGGACCACGGTTGAAACCGGTGAC 64829 >seq343166 Length=2784 Score = 140 bits (154), Expect = 2e-28 Identities = 210/298 (70%), Gaps = 3/298 (1%) Strand=Plus/Plus Query 97544 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97603 ||| |||| |||||||| | |||||||| || ||||||| ||| || ||| || Sbjct 475 CGCGCCCATCGGCAGGAACAGGGCGTCACCCTGGCCGATGAGCTTCTCCGCGCCGGGCTG 534 Query 97604 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97663 ||| |||| || ||| |||| || || | || ||||| | || | || ||||| Sbjct 535 GTCGAGGACGACGCGGGAGTCGGCCAGCGACGAGGTCGCGAAGGCCAGACGCGAAGGCAC 594 Query 97664 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97723 ||||| ||||| ||||| || || || || ||| ||| ||||| || || || || || Sbjct 595 GTTGGCCTTGATCAGGCCGGTAACGACGTCGACGCTGGGTCGCTGGGTGGCGAGCACCAG 654 Query 97724 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97783 || || || || || |||||| ||||| |||||| || ||||||||| || Sbjct 655 GTGGATGCCTGCGGCACGCGCCAGCTGGGTGATGCGCTGGATCGAGGCCTCGACGTCGCG 714 Query 97784 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97841 | | || ||||||||||||| ||||| |||||||| || |||| || ||| ||| Sbjct 715 CGGGG---CGACCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGGAGGTACGGG 769 >seq282189 Length=1723 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/186 (72%), Gaps = 9/186 (5%) Strand=Plus/Plus Query 97658 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 97717 ||| | ||||| ||||| ||||| |||| |||||||| || || ||||| |||||||| Sbjct 946 CGGGATGTTGGCCTTGATCAGGCCGGTGATCACATCCACCGACGGACGCTGGGTCGCCAG 1005 Query 97718 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 97777 || || || || || || || ||||| || || || | ||| | || | ||||| Sbjct 1006 CACCAGGTGGATGCCCGCCGCACGCGCTTTTTGCGCCAGACGGGCGATCAGCTCTTCGAC 1065 Query 97778 TTCTTTCTTGTAGCCGCCCATCATGA---GGTCTGCGAGTTCGTCGACCACTACCACGAT 97834 | ||||| ||| || |||||| | || |||| ||||||||||| |||||||| Sbjct 1066 CT---TCTTG---CCGACCGTCATGATCAGATCGGCGAATTCGTCGACCATCACCACGAT 1119 Query 97835 GTAGGG 97840 ||| || Sbjct 1120 GTACGG 1125 >seq344911 Length=228063 Score = 82.4 bits (90), Expect = 5e-11 Identities = 52/55 (95%), Gaps = 1/55 (2%) Strand=Plus/Minus Query 54516 GTGCCCTCGGTGAGATTCGAACTCACACTGTACGGGTTTTGAATCC-TTTGCTCT 54569 |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| Sbjct 196437 GTGCCCTCGGTGAGATTCGAACTCACACTGCACGGGTTTTGAATCCGTTTCCTCT 196383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 349932832120576