Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq166006 127 2e-24 SEQ78411 114 1e-20 SEQ30190 87.8 2e-12 >seq166006 Length=2036 Score = 127 bits (140), Expect = 2e-24 Identities = 535/834 (64%), Gaps = 27/834 (3%) Strand=Plus/Plus Query 104246 GCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCC 104305 ||| | || || ||||| ||||| || || || ||| | ||||| |||||| |||||| Sbjct 8 GCCCTGGGCATACATGGCGAAGATATCGACTCGGTCATCGAGACCTACGACTGCATGTCC 67 Query 104306 CAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAA 104365 | || ||||| ||||| || || || || |||||| ||||||| | ||||| Sbjct 68 AAGGGCTACTTCATACACGCGACTCCTACTCTTTTCAATTCTGGTACGTCTCATCCCCAG 127 Query 104366 ATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACT 104425 | || || || || | || | ||| || || ||| | || |||| ||| Sbjct 128 CTATCTTCCTGTTTTCTCGTGGCTATGTCGGACGATTCTATCGAAGGAATCTTCCAAACC 187 Query 104426 CTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCAC--ATCCATG 104483 || | || ||||| ||||| || | || || ||||| || |||| ||||| Sbjct 188 CTCAAAGACTGTGCAGCCATCTCTAAATCTGCAGGCGGTATCGGCCTGCATGTATCCAAC 247 Query 104484 ATGTGAGAGCCAATAAATCTCGTAT---TCGGGGGACAAATGGTCAATCAGATGGTATTA 104540 || | | ||| | ||| ||| || || ||||||||| || ||| ||| Sbjct 248 ATTCGGG---CAA-AGGGCTCCTATATATCCGGC-ACAAATGGTTTTTCTTCTGGAATTG 302 Query 104541 TTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAA 104600 | || |||||||| || || || | ||| | ||||| | || | || |||| Sbjct 303 TGCCTATGCTTCGTGTTTTCAATAATATGGCGAGGTATGTCGACCAGGGGGGAAACCGAA 362 Query 104601 AG---GGATCTATCGCAGTCTATCTTG-AGCCATGGCACGCGGATATCATGGAGTTCCTT 104656 | || || || | || | |||| |||| ||||| || |||||||||| |||||| Sbjct 363 GGCCGGGGGCTGTCTCTATC-ACCTTGGAGCCCTGGCATGCAGATATCATGGGTTTCCTT 421 Query 104657 GAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTC 104716 || | || ||||| || | || || ||| |||||| || |||| |||||| Sbjct 422 GATCTCCGAAAAAACCACGGAAAGGAAGAATACCGGGCCCGCGACCTTTTCTATGCTCTC 481 Query 104717 TGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGT 104776 |||||||||||||| |||||| | || | | | | | ||||| |||||| || Sbjct 482 TGGATTCCAGATCTTTTCATGCGAAAGGTCAAAAACAACGAAACTTGGTATCTCTTCAGT 541 Query 104777 CCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACA 104836 || |||| || ||||| || |||| || ||| | || || || || || ||| Sbjct 542 CCGGACACCGCGCCTGGGCTGGCCGACTCCTGCGGTAAAGAATTCGAGGCTCTCTACGAG 601 Query 104837 AAGTACGAGGAAGAAGGTCGGG-----CGACTGCGACGGTGC-CAGCTGCCGATGTGTGG 104890 ||||||| | || || || | ||| || | ||| ||| || | ||| Sbjct 602 AAGTACGTCGGCGACGG-CGTGTTTATTGACAGCATCTCTGCACAG-----GAGCTCTGG 655 Query 104891 AAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCC 104950 | || || ||||| | || | |||||||| | || | || || | ||| || || Sbjct 656 ACTGCGATCGTCAAGGCGCAGTCTGAGACTGGCAATCCCTCGATCCTCTTCAAGGATGCA 715 Query 104951 TGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACA 105010 || |||| ||| ||||| | || | || ||| ||| ||| |||||||| || Sbjct 716 TGCAACCTCAAGTCCAATCAGCAAAACCTTGGAACGATAAAGTCTTCGAATCTCTGCACT 775 Query 105011 GAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCA 105064 |||||| | |||| | ||||| || ||| || ||||| || || || ||| Sbjct 776 GAAATCATTGAATACTCCGACAACGACCAGATCGCCGTGTGCAATCTGGCGTCA 829 >SEQ78411 Length=2203 Score = 114 bits (126), Expect = 1e-20 Identities = 174/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || | ||||| || || |||| ||| | ||||| || Sbjct 1693 CTCTTCAACGCCATCGAGACCATCCCGTGCATCCAGCAGAAGGCGCAGTGGGCGCTGCGC 1752 Query 94774 TGGTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | | || | ||||| ||||||| ||||| || | || ||||| || Sbjct 1753 TGGATCCAGGACGAGGAGTCGA---CCTTTGCCGAGCGGCTGGTGGCCTTTGCCGTCGTC 1809 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 ||||| ||||||||||| || ||||| | | || | ||||| |||||||| || || Sbjct 1810 GAGGGCATCTTCTTCTCGGGGTCCTTTGCCTCCATCTTCTGGCTTAAGAAGCGGGGCCTG 1869 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 94950 ||||| ||||| ||||||||||||||| ||||| || ||||||||| | ||| || Sbjct 1870 ATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCGCGCGACGAGGGAATGCACACGGAC 1929 Query 94951 TTTGC 94955 ||||| Sbjct 1930 TTTGC 1934 >SEQ30190 Length=43192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/140 (75%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 |||| ||||||| | | |||||||| || ||||| |||||||| || || ||| Sbjct 6807 TTTGGTGAGCGAATAGTTGCATTTGCAGCAGTGGAGGGCATCTTCTTTTCCGGCAGCTT- 6865 Query 94858 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 ||| |||| | |||||||||||||| || | |||||||||||| ||| ||| || Sbjct 6866 TGCTTCTATCTTCTGGCTCAAGAAGCGTGGCATTATGCCAGGTCTCACTTTCAGCAATGA 6925 Query 94917 GCTTATCTCTCGTGACGAGG 94936 ||| ||||| ||||| |||| Sbjct 6926 GCTCATCTCGCGTGATGAGG 6945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580657357093120