Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028744.1 Length=53141 Score E Sequences producing significant alignments: (Bits) Value seq103768 443 7e-120 seq311842 302 2e-77 >seq103768 Length=2474 Score = 443 bits (490), Expect = 7e-120 Identities = 398/498 (80%), Gaps = 19/498 (4%) Strand=Plus/Plus Query 4694 TCACCCGCAAGCAGGCGCAGTGGGTCCACGACATGGCCCGCGCCCGGAACGGTCTCCCGT 4753 ||||||| ||| ||||||| ||||||||| |||||||||| || || || || || | Sbjct 1401 TCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCAAGGGCCTGCCCT 1460 Query 4754 ACGCCTACGGCGGTGCGTTCACCAACGACCCGAAGCGA-TCGACCGACTGCTCTGGCCTG 4812 |||||||||| || ||||||||| ||||||| ||| |||||||| ||||| |||||| Sbjct 1461 ACGCCTACGGTGGCGCGTTCACCCGCGACCCGC-GCGTGTCGACCGATTGCTCCGGCCTG 1519 Query 4813 GTGCTGCAAACCGGAGCCTGGTACATGGGCCGTACCGACTGGGTCGGTAACCGCTACGGC 4872 |||||||| |||| |||||||||| |||||| ||||||||| ||| |||||||||||| Sbjct 1520 GTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAAACCGCTACGGC 1579 Query 4873 TCCACCGAGAGCTTCCGGCTCGACCACAAGATCGTCTACGACATCGGCTTCCGACGCCTG 4932 |||||| ||||| || ||| || |||||||||||||| |||| ||| |||||| Sbjct 1580 AGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGTTCAAGCGCCTG 1639 Query 4933 CCTCCGGGCGGCGTCAAGGCACTGCCGTTCAAGCCGGTCATGCTCGTCGGGCTTCAGCAC 4992 || ||||||| | || ||||||||||||||||| |||||||||||||| |||||| Sbjct 1640 CCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCGGGCTGCAGCAC 1699 Query 4993 GGCGGCGGCGGGGTCAACTCGCACACCGCCTGCACGCTGATGACGATGGACATCCCCGGT 5052 ||||||||||| |||||||||||||| || |||||||| |||||||||||| | ||||| Sbjct 1700 GGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGGACGTTCCCGGC 1759 Query 5053 GGCCCGGT-GAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGGGAACCGCGCTGG 5111 || ||||| | || ||| | || ||||||||||||||||||| ||| || Sbjct 1760 GGGCCGGTCGTCGA-GTCGGTGCGCGGCGTCGACTGGGAGTCCCGCGGTGAC-------- 1810 Query 5112 CGGCATCGGCGTCGACCTCTACGACTACGCACGGGCCTGGAACGATCCGCTGTTCCACGA 5171 ||||| | || |||||| ||| || |||||||||||||||||||||||||| Sbjct 1811 -------GGCGTGTATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGTTCCACGA 1863 Query 5172 CTTCTGGTACCTGGACGC 5189 |||||||||||| ||||| Sbjct 1864 CTTCTGGTACCTCGACGC 1881 >seq311842 Length=41669 Score = 302 bits (334), Expect = 2e-77 Identities = 341/451 (76%), Gaps = 7/451 (2%) Strand=Plus/Plus Query 4750 CCGTACGCCTACGGCGGTGCGTTCACCAACGACCCGAAGCGATCGACCGACTGCTCTGGC 4809 |||||||| | ||| || ||||||| | |||||||||||| || ||||||||||| || Sbjct 34349 CCGTACGCATTCGGTGGCGCGTTCAGTACCGACCCGAAGCGCTCCACCGACTGCTCCGGG 34408 Query 4810 CTGGTGCTGCAAACCGGAGC-CTGGTACATGGGCCGTACCGACTGGGTCGGTAACCGCTA 4868 ||||| |||| ||||| || ||| | |||||||| ||||||||| || |||||||| Sbjct 34409 CTGGTCTTGCAGACCGGCGCGCTGCT-GATGGGCCGCACCGACTGGTCGGGAAACCGCTA 34467 Query 4869 CGGCTCCACCGAGAGCTTCCGGCTCGACCACAAGATCGTCTACGACATCGGCTTCCGACG 4928 |||||| || || ||||| || || || ||| |||| ||||||||| ||| || Sbjct 34468 CGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTTCGACATCGGATTCAAGCG 34527 Query 4929 CCTGCCTCCGGGCGGCGTCAAGGCACTGCCGTTCAAGCCGGTCATGCTCGTCGGGCTTCA 4988 ||| || | |||| ||| | || ||| || |||| ||||||||||||| || || Sbjct 34528 CCTTCCCGCCAGCGGGGTCCAAGCGCTGGGTTTTGCGCCGATCATGCTCGTCGGACTGCA 34587 Query 4989 GCACGGCGGCGGCGGGGTCAACTCGCACACCGCCTGCACGCTGAT-GACGATGGACATCC 5047 ||||||||||||||| | || |||||||| ||||| ||| | ||| ||| | | Sbjct 34588 GCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCTGTTCTACG-CCGACGTTC 34646 Query 5048 CCGGTGGCCCGGTGAAGATGTCCGACCGAGGCGTCGACTGGGAGTCCCACGGGAACCGCG 5107 | || || | | || ||| | || || ||||||||||| |||||| |||||| Sbjct 34647 CGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGGAGAGCCACGGAAACCGC- 34705 Query 5108 CTGGCGGCATCGGCGTCGACCTCTACGACTACGCACGGGCCTGGAACGATCCGCTGTTCC 5167 |||| |||| |||||| ||||||| |||| || ||||||||||| |||||||||| Sbjct 34706 --AACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGAACGACCCGCTGTTCC 34763 Query 5168 ACGACTTCTGGTACCTGGACGCCAAGCTCGA 5198 | ||||||||||||||||||||||||||||| Sbjct 34764 AAGACTTCTGGTACCTGGACGCCAAGCTCGA 34794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169209027125568