Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq354468 140 1e-28 SEQ69527 125 3e-24 >seq354468 Length=1681 Score = 140 bits (154), Expect = 1e-28 Identities = 274/394 (70%), Gaps = 12/394 (3%) Strand=Plus/Plus Query 5841 CGGCCCAGCAGGGACGGGGAAGACCTTCCTGGCCATCCACCACGGCCTGCGCCT-GCTGG 5899 |||||| || || ||||| ||||||| ||||| || ||| ||| |||| |||| Sbjct 331 CGGCCCGGCCGGCACGGGTAAGACCTATCTGGCGATGG-CCAAGGCGGTCGCCGCGCTGC 389 Query 5900 AGGCCGGGGAGATCCAGCGCCTCGTCATCACCCGGCCCGCCGTTGAGGCAGATGAGAAGC 5959 ||||| | || || ||| || || | ||||| || || || ||||| | ||| | Sbjct 390 AGGCCAAGCAGGTCAGCCGCATCATCCTGACCCGACCTGCGGTCGAGGCGGGGGAGCGAC 449 Query 5960 TCGGCTTCCTGCCCGGCACTGTGGACGAGAAGATGGCACCCTACCTCACCCCGATGCTGG 6019 ||||||||||||||||||| || |||| ||||| | |||||||| ||| ||| | Sbjct 450 TCGGCTTCCTGCCCGGCACGCTGAACGACAAGATCGACCCCTACCTGCGGCCGCTGCACG 509 Query 6020 ACGCGGTGATCGACCTGGTCGGCCC---GACGATGACGAAGCGCCTCCTCGAGTCGCGCC 6076 ||||| || |||| || | | ||| | |||| |||||| | || ||| | Sbjct 510 ACGCGCTGCACGACATGATGGACCCGGAGGCGATTCCGAAGCTGATGGCCG-CCGGCGTC 568 Query 6077 AGCTGGAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGACGTTCAACGACACGTACATCG 6136 | | ||||| || || ||||| |||||||| || || || |||||||| | | ||||| Sbjct 569 A--TCGAGGTGGCGCCCCTGGCGTACATGCGTGGGCGCACCCTCAACGACGCCTTCATCG 626 Query 6137 TCGCT-GACGAGATGCAGAACGCCACC-CCGCGCCAGACCGCGCTGCTGGTGACCCGCCT 6194 | ||| |||||| ||||||| ||||| ||| | |||| | || | | || || || Sbjct 627 T-GCTGGACGAGGCGCAGAACACCACCGCCGAG-CAGATGAAGATGTTCCTCACGCGGCT 684 Query 6195 GGGCTTCGGGACGAAGGCCGTCCTGAACGGTGAC 6228 |||||||| ||||| ||| | | ||| ||| Sbjct 685 CGGCTTCGGCTCGAAGATCGTGGTCACCGGCGAC 718 >SEQ69527 Length=7670 Score = 125 bits (138), Expect = 3e-24 Identities = 238/344 (69%), Gaps = 15/344 (4%) Strand=Plus/Minus Query 5921 TCGTCATCACCCGGCCCGCCGTTGAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTG 5980 || || ||||||| || ||||| || || | |||| ||||||| |||||| |||||| Sbjct 3508 TCATCCTCACCCGTCCGGCCGTCGAAGCCGGCGAGAGCCTCGGCTACCTGCCGGGCACTC 3449 Query 5981 TGGACGAGAAGATGGCACCCTACCTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCG 6040 | |||| ||||| | ||||| | |||| | ||||| || |||| |||||| Sbjct 3448 TCAACGACAAGATCGACCCCTATGTGCGCCCGCTCTACGACGCCCTGCACGACATGGTCG 3389 Query 6041 GCCCGACGATGACGAAGC-GC--CTCCTCGAGTCGCGCCAGCTGGAGGTCGCCCCGCTGG 6097 ||| ||| | ||| | || ||| ||||| | || | | |||||||||||||||| Sbjct 3388 ACCC--CGA-GTCGATCCCGCTGCTCATCGAGACCGGCACGATCGAGGTCGCCCCGCTGG 3332 Query 6098 CCTACATGCGAGGCCGGACGTTCAACGACACGTACATCGTCGCTGACGAGATGCAGAACG 6157 | |||||||| || || || |||||||| ||| |||| || |||||| ||||||| Sbjct 3331 CGTACATGCGCGGACGCACCCTCAACGACGCGTTCATCATCCTCGACGAGGCGCAGAACA 3272 Query 6158 CCACCCCGCGCCAGACCGCGCTGCTGGTGACCCGCCTGGGCTTCGGGAC---GAAGGCCG 6214 | ||| |||| | || | | |||||||| |||||||| | || || || Sbjct 3271 CGACCGGTGAGCAGATGAAGATGTTCCTCACCCGCCTCGGCTTCGGATCCCGGATGGTCG 3212 Query 6215 TCCTGAACGGTGACCCGGCCCAGTGCGACCTGCCGCCCGGCAAG 6258 || | ||| ||| | ||||| ||| |||||| |||||| Sbjct 3211 TC---ACCGGCGACGTGTCCCAGATCGATCTGCCG---GGCAAG 3174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190676010455040