Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028784.1 Length=51409 Score E Sequences producing significant alignments: (Bits) Value SEQ97744 203 1e-47 seq216857 123 8e-24 seq353213 84.2 7e-12 SEQ87579 84.2 7e-12 >SEQ97744 Length=86731 Score = 203 bits (224), Expect = 1e-47 Identities = 201/260 (77%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 41671 GATTTTGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGATCTCGAAGCCCGCG 41730 |||||||||||||| || ||||||||||||||| ||||| | |||||| || ||| Sbjct 15340 GATTTTGGGAACCCTTGGCTGTAGAGCCACGCGATATGATCGCGTAGCTCGAATCCGGCG 15399 Query 41731 TCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTGC 41790 |||||||| || |||| |||||||||||||||||| || || |||||||| ||||||||| Sbjct 15400 TCCTCGATCGCGACGGCCAGCCGGTGCCAGGTGCGTGATCCACCGAAGGCCAGCAGGTGC 15459 Query 41791 CCACCGGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACATCGAAAGCGATGCCC 41850 || || || |||||||| ||||| || |||| ||||| | | || | ||| ||||| || Sbjct 15460 CCGCCAGGTTTGAGGACACGCAGACACTGCTGCCACACCGCAACGTTGAAGGCGATACCG 15519 Query 41851 GAGCCGTCCCACTTCTTGCCCATGAATCCCAGCTCATAGGGCGGGTCTGTGAGAATTGCA 41910 | || ||||| || |||||||| ||||| ||||| || || || |||| | || Sbjct 15520 GTTCCATCCCAACGTTTCCCCATGAAGCCCAGTTCATACGGTGGATCAGTGATGACCGCG 15579 Query 41911 TCGATACTGGCGTCTTCTAG 41930 || | ||||| || || || Sbjct 15580 TCCACGCTGGCATCATCGAG 15599 Score = 86.0 bits (94), Expect = 2e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 40861 ACGCGGCAGGCGTCAATGTTGATAGCCCCCGTGCCGTGCTCCAGGACATTCGCCGCCACC 40920 || |||||||||||||||| | ||||| || |||| ||||||| || ||||| || Sbjct 14794 ACCCGGCAGGCGTCAATGTGCAGCGCCCCGGTTCCGTAGGCCAGGACGTTGGCCGCGACG 14853 Query 40921 GTGCCCGCGAGAGGCTTGCGCGCAACCACGATGGGCTCGAACGCCGGTTTCAGCGCCGTG 40980 ||||||| | || || || || ||||| | ||||| || || ||||| ||||| ||| Sbjct 14854 GTGCCCGACAACGGTTTACGTGCCACCACCACTGGCTCAAATGCGGGTTTGAGCGCGGTG 14913 Query 40981 CC 40982 || Sbjct 14914 CC 14915 >seq216857 Length=94037 Score = 123 bits (136), Expect = 8e-24 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 41671 GATTTTGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGATCTCGAAGCCCGCG 41730 || || |||||||| ||||| | ||| ||||| |||||||| |||||| || | Sbjct 15452 GACTTCGGGAACCCCGACCCGTACAACCAGGCGATGCTGTCGCGGAGCTCGAAACCGGAA 15393 Query 41731 TCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTGC 41790 |||||||| || | | ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct 15392 TCCTCGATCGCAGCCGCGAGCCGATGCCAGGTGCGCGAGCCGCCGAACGCGAGTAGGTGT 15333 Query 41791 CCACCGGGCTTGAGGACCCGCAGGCA 41816 ||||| ||||||||||| || ||||| Sbjct 15332 CCACCCGGCTTGAGGACGCGTAGGCA 15307 >seq353213 Length=1209 Score = 84.2 bits (92), Expect = 7e-12 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 2436 TAGCTCAATTTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 2493 |||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 446 TAGCTCAATT-GGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 >SEQ87579 Length=2886 Score = 84.2 bits (92), Expect = 7e-12 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 2436 TAGCTCAATTTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 2493 ||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1477 TAGCTCAGTT-GGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAGTCCTG 1421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163690129229376