Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028794.1 Length=52647 Score E Sequences producing significant alignments: (Bits) Value seq103768 484 2e-132 seq311842 322 2e-83 >seq103768 Length=2474 Score = 484 bits (536), Expect = 2e-132 Identities = 409/505 (81%), Gaps = 12/505 (2%) Strand=Plus/Plus Query 5207 TGACCTTCGTCGTAACCCGCCAGCGAGCGCAGTGGGTCCACGACATGGCCCGCGCCCGCA 5266 |||| ||| || ||||| ||||| |||||| ||||||||| |||||||||| |||| Sbjct 1389 TGACGTTCACGGTCACCCGGCAGCGGGCGCAGGAAGTCCACGACCTGGCCCGCGCGCGCA 1448 Query 5267 ACGGCCTCCCGTACGCCTACGGCGGCGCGTTCACCAACGACCCGAGGCGCTCGACAGACT 5326 | ||||| || ||||||||||| |||||||||||| ||||||| | ||||| || | Sbjct 1449 AGGGCCTGCCCTACGCCTACGGTGGCGCGTTCACCCGCGACCCGCGCGTGTCGACCGATT 1508 Query 5327 GCTCTGGACTGGTGCTTCAGACCGCCGCCTGGTACGGCGGTCGCACCGACTGGGTCGGTA 5386 |||| || |||||||| |||||||| ||||||||| | || |||||||||||| ||| | Sbjct 1509 GCTCCGGCCTGGTGCTGCAGACCGCGGCCTGGTACAGGGGCCGCACCGACTGGCCCGGAA 1568 Query 5387 ACCGCTACGGCTCCACCGAGAGCTTCCGCCTGGACCACAAGATCGTGTACGACCTGGGGT 5446 ||||||||||| |||||| |||||||||||| || ||||||| |||||||| |||| Sbjct 1569 ACCGCTACGGCAGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGT 1628 Query 5447 TCAAGCGTCTCCCCCGCGGAGGCGTTGACGCCCTGCCGTTCAAGCCGGTCATGCTCGTCG 5506 ||||||| || || || || | | ||| ||||||||||||||||| |||||||||| Sbjct 1629 TCAAGCGCCTGCCGGCGGGCGGGCTGGCCGCGCTGCCGTTCAAGCCGGTGATGCTCGTCG 1688 Query 5507 GCCTGCAGCACGGCGGCGGCGGGGTCAACTCGCACACCGCCTGCACGCTGATGACGATGG 5566 | |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||| Sbjct 1689 GGCTGCAGCACGGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTCATGACGATGG 1748 Query 5567 ACATCCCCGGTGGCCCGGTGGTTCAGTCTGTCCGCGGCGTCGACTGGGAGTCCCACGGTA 5626 || | ||||| || ||||| || |||| || |||||||||||||||||||||| |||| Sbjct 1749 ACGTTCCCGGCGGGCCGGTCGTCGAGTCGGTGCGCGGCGTCGACTGGGAGTCCCGCGGT- 1807 Query 5627 ACCGCAACGGCGTCGGCGTGGATCTCTACGACAACGCACGGGCCTGGAACGACCCGCTCT 5686 | ||||||| |||| |||||| ||| || ||||||||||| ||||| | Sbjct 1808 -----------GACGGCGTGTATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGT 1856 Query 5687 TCCACGATTTCTGGTACCTGGACGC 5711 ||||||| ||||||||||| ||||| Sbjct 1857 TCCACGACTTCTGGTACCTCGACGC 1881 >seq311842 Length=41669 Score = 322 bits (356), Expect = 2e-83 Identities = 354/466 (76%), Gaps = 4/466 (1%) Strand=Plus/Plus Query 5257 CGCGCCCGCAACGGCCTCCCGTACGCCTACGGCGGCGCGTTCACCAACGACCCGAGGCGC 5316 || |||||| ||| | |||||||| | ||| |||||||||| | |||||||| |||| Sbjct 34331 CGTGCCCGCCGAGGCTTGCCGTACGCATTCGGTGGCGCGTTCAGTACCGACCCGAAGCGC 34390 Query 5317 TCGACAGACTGCTCTGGACTGGTGCTTCAGACCGCCGC-CTGGTACGGCGGTCGCACCGA 5375 || || |||||||| || ||||| | ||||||| ||| ||| | | || |||||||| Sbjct 34391 TCCACCGACTGCTCCGGGCTGGTCTTGCAGACCGGCGCGCTGCTGATG-GGCCGCACCGA 34449 Query 5376 CTGGGTCGGTAACCGCTACGGCTCCACCGAGAGCTTCCGCCTGGACCACAAGATCGTGTA 5435 |||| || |||||||||||||| || || ||||| ||| || || ||| || | Sbjct 34450 CTGGTCGGGAAACCGCTACGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTT 34509 Query 5436 CGACCTGGGGTTCAAGCGTCTCCCCCGCGGAGGCGTTGACGCCCTGCCGTTCAAGCCGGT 5495 |||| | || |||||||| || ||| | | || || | || ||| || |||| | Sbjct 34510 CGACATCGGATTCAAGCGCCTTCCCGCCAGCGGGGTCCAAGCGCTGGGTTTTGCGCCGAT 34569 Query 5496 CATGCTCGTCGGCCTGCAGCACGGCGGCGGCGGGGTCAACTCGCACACCGCCTGCACGCT 5555 |||||||||||| |||||||||||||||||||| | || |||||||| ||||| || Sbjct 34570 CATGCTCGTCGGACTGCAGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCT 34629 Query 5556 GATG-ACGATGGACATCCCCGGTGGCCCGGTGGTTCAGTCTGTCCGCGGCGTCGACTGGG 5614 | | ||| | || | || || || | | ||||| || ||||| ||||||||| Sbjct 34630 GTTCTACGCCG-ACGTTCCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGG 34688 Query 5615 AGTCCCACGGTAACCGCAACGGCGTCGGCGTGGATCTCTACGACAACGCACGGGCCTGGA 5674 || |||||| ||||||||||||||||| || || |||||||||||| || ||||||| Sbjct 34689 AGAGCCACGGAAACCGCAACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGA 34748 Query 5675 ACGACCCGCTCTTCCACGATTTCTGGTACCTGGACGCCAAGCTCGA 5720 |||||||||| ||||| || |||||||||||||||||||||||||| Sbjct 34749 ACGACCCGCTGTTCCAAGACTTCTGGTACCTGGACGCCAAGCTCGA 34794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167634930381504