Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028936.1 Length=59052 Score E Sequences producing significant alignments: (Bits) Value seq276562 203 1e-47 SEQ97744 196 2e-45 >seq276562 Length=247471 Score = 203 bits (224), Expect = 1e-47 Identities = 271/374 (72%), Gaps = 2/374 (1%) Strand=Plus/Minus Query 11876 GTGAAGGGTACAGCGTTCGGGCTCGACGAGGCCGCCACCACGGCCGCATCCGCGGTGGCC 11935 |||||||| || || ||| | | ||||| || |||||||| || || | ||||| ||| Sbjct 246898 GTGAAGGGCACCGCCTTCTCGATGGACGAAGCGGCCACCACAGCGGCCACGGCGGTCGCC 246839 Query 11936 GCTGGCATCAAGCCCGGCGAGCAGTTGGAGCGATACCTCAAGCTCGTCGGCGACACGGCC 11995 || || |||||||||| ||| | ||| ||||| | ||||| || | ||| Sbjct 246838 GCCGGGGTCAAGCCCGGTGAGGACTTGTCCAAGTACCTGACCACCGTCGCTGATGCCGCC 246779 Query 11996 GCGATCGCAGG-GACGTCGCTGGCCGACATGGGCGCGATCTTCAACAAGGTGCAGACGTC 12054 |||||||| || | || | ||| ||| ||||| |||||||||||||||||||| || Sbjct 246778 GCGATCGCGGGCGCCGACA-TGGGCGATATGGGGCACATCTTCAACAAGGTGCAGACCTC 246720 Query 12055 AGGTAAGGCGTTCACCGGAGACCTCAACATGCTCTCCGACCGGGGCCTGCCGATCTTTCA 12114 || |||||| | |||| ||||| |||||||| ||| ||||| |||||||||| Sbjct 246719 GGGCAAGGCGATGACCGATGACCTGAACATGCTGGGCGATCGGGGATTGCCGATCTTCGC 246660 Query 12115 GTGGCTCCAAGAGGAGTACCGGGTCAGCGGCGAGGAACTGTCGAAGATGGTCTCGGAGGG 12174 ||||| ||| |||| ||| ||||| ||||| || ||||| ||||||||| |||| Sbjct 246659 CTGGCTGCAAAAGGAATACAAGGTCACCGGCGCCGAGCTGTCCAAGATGGTCGAAAAGGG 246600 Query 12175 CAAGGTTGACGCCGAGACTTTCCAGAAGGTCGTTGCCGAGCGGATCGGCGGCGCCGCGCA 12234 | |||||||| | | || |||||| ||| | ||| || | ||||| |||| | Sbjct 246599 CCAGGTTGACTCAGCCACATTCCAGCGCGTCATCGCCCAGAACGTGGGCGGTACCGCCAA 246540 Query 12235 GAACATGGGCGGCA 12248 ||| |||||||||| Sbjct 246539 GAAGATGGGCGGCA 246526 Score = 109 bits (120), Expect = 2e-19 Identities = 206/297 (69%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 17356 GAACCTCAACCCGCTGAACTGGCCGGTGCAAATGCAGTTCGTCAACCCGCTGCTGGATCG 17415 ||||||| ||||||| ||||||| | || || |||||||||||||| | |||||| Sbjct 242641 GAACCTCTCCCCGCTGCACTGGCCAATACAGATACAGTTCGTCAACCCCGTCTTGGATCA 242582 Query 17416 GTCGCGCATGAGTGTTGTCAT-GTCGCGCTGGT-CGGCTGC-GCACGACGTCTGCGATGC 17472 |||||| || ||| | || | |||| | | ||| ||||||| | || | Sbjct 242581 GTCGCGTATC-GTGCCG--ATCGCCGCGAAAGCGCAAATGCTGCACGACATTCACGCACC 242525 Query 17473 GCTGCTCAAGTACGCCGGGTGCCATGTGCGGGCGTACTGCTGGCTGGAAGAGGACGAGGA 17532 |||| | || || | || | || | ||| ||| ||||||||||||| Sbjct 242524 GCTGGGCGAGGACACTGGCGTCGGACTGATCGACTACCTGTGGTTGGAAGAGGACGAAAC 242465 Query 17533 CAGTCCGCACCCCGAGCTGGCGGCGATCGTCGGCGAGAAGCTGGCTCGGCCGACGCGGAA 17592 ||| ||||||||||| ||||| || |||||||||||||| ||||| || || || || Sbjct 242464 CAGCCCGCACCCCGAACTGGCCGCACTCGTCGGCGAGAAGGCCGCTCGCCCCACACGCAA 242405 Query 17593 CTGCATTGTGCTTGCGGTAGAGGACATGTCAGGCACGACTGGCGTTACGGGCACTGC 17649 |||||| ||||| || | || |||| |||||| | || ||| ||| || || || Sbjct 242404 CTGCATCGTGCTCGCCTTCGAAGACAAGTCAGGAATCACCGGCCCTACCGGGACAGC 242348 >SEQ97744 Length=86731 Score = 196 bits (216), Expect = 2e-45 Identities = 383/558 (69%), Gaps = 11/558 (2%) Strand=Plus/Minus Query 901 CCCGAGGGCATCGTGTCGACGTCGTGGCCGTC--TGTACGCCACGAGTGCAACGTCAACA 958 || || ||||| |||||||| |||||||| | | |||||| ||||| | | | Sbjct 8589 CCTGACGGCATTGTGTCGACCGAATGGCCGTCCATCTGCGCCACA--TGCAAAG---AGA 8535 Query 959 TGGGTCTGTTCTTCGACCGCTGGCAGGACGACCTCGGAAAGCTGGTGTGTGCCAAGCGTT 1018 |||| | ||||| |||||| |||| ||| || ||| | | |||||||| Sbjct 8534 TGGGCATCGAGTTCGATGACTGGCAAGACGGCCTGGGTCGCCTGATCTTGGCCAAGCGCG 8475 Query 1019 CCGATGGCCTGTACGCGGCCGACATGTTCGCTATGTCGATCCCGCGACAGACCGGCAAGA 1078 |||| ||||||||||| | |||| | || || || ||||| || ||| |||| |||| Sbjct 8474 CCGACGGCCTGTACGCCTCGGACACGACGGCGATCTCAATCCCCCGGCAGTCCGGGAAGA 8415 Query 1079 CCTACTTCCTCGGCGCCCTGGTGTTCGCGCTGTGCAGGATGACGCCCGGCACAACGGTGA 1138 | | | || |||||||| | |||||||||||||||| | | || ||| ||| | Sbjct 8414 CTTTCCTCATCGGCGCCATCGTGTTCGCGCTGTGCATCAAGTATCCGGGCCTGCGGGTCA 8355 Query 1139 TCTGGACAGCGCACCGGACCCGCACTGCTGCG-GAGACGTTCAAGTCGATGCAGGCGCTC 1197 ||||||| ||||||| | | || || ||| || || ||| |||||||||||||| Sbjct 8354 TCTGGACCGCGCACCTGTTCAAAACGGC-GCGTGAAACTTTCGAGTCGATGCAGGCGACA 8296 Query 1198 GCCAAGC-GCGAGCAGATCGCCCCGCACATCCGCGCGGTGCACACCGGCAACGGCAAAGA 1256 | |||| || | | || ||| ||||| || ||| ||| ||| | || Sbjct 8295 TCGAAGCTGCCCGGCG-TCAAGCCGTACATCGATTTCGTCCACCGTGGCGCAGGCGATGA 8237 Query 1257 GGCTGTGCTGTTCTCCAATGGCAGCCGAATCCTGTTCGGTGCCCGCGAGAAGGGCTTTGG 1316 | | ||| |||| || ||| |||||||||| || ||| || || || Sbjct 8236 GAAGATCGGTTTCGCCAACGGTTCGGTGATCATGTTCGGTGCTCGTGAGCGTGGATTCGG 8177 Query 1317 TCGCGGTTTCGCCAAGGTCGACGTCCTGATTTTCGACGAGGCGCAGATCCTCACCGAGAA 1376 ||| || ||| |||| ||| ||||||||||||||| ||||| ||||||||||| || Sbjct 8176 TCGTGGCTTCCCCAACATCGGCGTCCTGATTTTCGATGAGGCCCAGATCCTCACGTCAAA 8117 Query 1377 CGCGATGGACGACATGATCCCGGCGACCAACGCCGCGCCGAACGGCCTGGTGTTGTTCGC 1436 ||| | ||||||||| |||| ||||||||| |||| |||| || || ||| Sbjct 8116 AGCGCTAGACGACATGGTCCCATCGACCAACGTCGCGGTGAACCCGCTTGTCTTGACGAT 8057 Query 1437 GGGCACGCCGCCGAAGCC 1454 |||||| ||||||||||| Sbjct 8056 GGGCACACCGCCGAAGCC 8039 Score = 104 bits (114), Expect = 9e-18 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 58765 TGCGGCGAGCCCATCGACTACGACGCGCACCACCTGCACCCGTTGAGCTTTCAGGTCGAC 58824 |||||||| |||||||||||||||| | ||||| ||||| |||| | || || ||| Sbjct 9579 TGCGGCGAACCCATCGACTACGACGTCGATCACCTACACCCCCTGAGTTACCAAGTGGAC 9520 Query 58825 CACATCACGCCGCTGGCTCGCGGCGGCACCGACACGCTCGACAACACGCAGCCGGTTCAC 58884 ||| ||| || ||| | || ||| | |||||||||| ||| | | ||| || Sbjct 9519 CACGTCATTCCACTGTCCAAGGGTGGCGCGGACACGCTCGCCAATAAGGTGCCATCGCAT 9460 Query 58885 CGCAAGTGCAACCGCGACAAGAGCGACAGCCTGCC 58919 || ||||||||||| ||||||||||||| ||||| Sbjct 9459 CGAAAGTGCAACCGGGACAAGAGCGACAAGCTGCC 9425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188044018733184