Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028947.1 Length=62738 Score E Sequences producing significant alignments: (Bits) Value seq276562 215 2e-51 SEQ97744 176 2e-39 SEQ31283 136 2e-27 seq353213 89.7 2e-13 SEQ87579 89.7 2e-13 seq299611 86.0 3e-12 >seq276562 Length=247471 Score = 215 bits (238), Expect = 2e-51 Identities = 318/447 (71%), Gaps = 10/447 (2%) Strand=Plus/Minus Query 12345 TTCAAGCTGCAAGGTCTCGGCAACACCGCCGAACAGGT---GCAGTCCATCATGGACAAC 12401 |||||| |||| | |||||||| |||| ||| |||| ||||||| | | Sbjct 246967 TTCAAGTTGCAGGCCCTCGGCAATGACGCCACCGCGGTCGCGCAG---ATCATGGCCGCC 246911 Query 12402 GCGCTGGCCGCGGTGAAGGGCACCGCGTTCGGCCTAGACGAGGCAGCCACCACGGCCGCA 12461 |||| || | |||||||||||||||| ||| | ||||| || |||||||| || || Sbjct 246910 GCGCAGGGCTCGGTGAAGGGCACCGCCTTCTCGATGGACGAAGCGGCCACCACAGCGGCC 246851 Query 12462 TCCGCAGTGGCCGCCGGCATCAAGCCCGGGCAGCAGCTCACCGACTACCTGAAGTTGGTC 12521 | || || |||||||| |||||||||| || | | || | ||||||| ||| Sbjct 246850 ACGGCGGTCGCCGCCGGGGTCAAGCCCGGTGAGGACTTGTCCAAGTACCTGACCACCGTC 246791 Query 12522 GGCGACACCGCGGCGATCGCCGGCACATCGCTGGCCGACATGGGCGCGATCTTCAACCGT 12581 | || |||| |||||||| ||| | ||| ||| ||||| ||||||||| Sbjct 246790 GCTGATGCCGCCGCGATCGCGGGCGCCGACATGGGCGATATGGGGCACATCTTCAACAAG 246731 Query 12582 GTGCAGACGTCGGGCAAGGCGTTCACCGGAGATCTTAACCAGCTCGCCGACCGCGGCCTG 12641 |||||||| |||||||||||| | |||| || || ||| ||| | ||| || || || Sbjct 246730 GTGCAGACCTCGGGCAAGGCGATGACCGATGACCTGAACATGCTGGGCGATCGGGGATTG 246671 Query 12642 CCTGTATTCCAGTGGCTTCAAGAGGAATACGGCGTAAGCGGCGCAGCGCTGGCGAAGATG 12701 || | ||| ||||| ||| |||||||| || | |||||| | |||| | |||||| Sbjct 246670 CCGATCTTCGCCTGGCTGCAAAAGGAATACAAGGTCACCGGCGCCGAGCTGTCCAAGATG 246611 Query 12702 GTCGAAAAGGGCAAGGTCGACGCCGCAACGTTCCAACGTGTTGTCG--CGGAACGAATCG 12759 |||||||||||| |||| ||| | || || ||||| || || ||| | ||||| | | Sbjct 246610 GTCGAAAAGGGCCAGGTTGACTCAGCCACATTCCAGCGCGTCATCGCCCAGAACG--TGG 246553 Query 12760 GCGGCGCCGCGCAGAACATGGGCGGCA 12786 |||| |||| |||| |||||||||| Sbjct 246552 GCGGTACCGCCAAGAAGATGGGCGGCA 246526 Score = 125 bits (138), Expect = 3e-24 Identities = 185/261 (71%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 18045 GAGGACGAGGACAGTCCGCACCCTGAGCTGGCGGCGCTGGTCGGCCAAAAGCTGGCGCGG 18104 |||||||| ||| |||||||| || ||||| || || |||||| | ||| || || Sbjct 242475 GAGGACGAAACCAGCCCGCACCCCGAACTGGCCGCACTCGTCGGCGAGAAGGCCGCTCGC 242416 Query 18105 CCGACGCGGAACTGCATTGTGCTTGCGGTCGAGGACAATTCGGGTGTCACCGGCCCGACC 18164 || || || |||||||| ||||| || |||| ||||| || || |||||||||| ||| Sbjct 242415 CCCACACGCAACTGCATCGTGCTCGCCTTCGAAGACAAGTCAGGAATCACCGGCCCTACC 242356 Query 18165 GGCACGGCGCTCGACGGCGCGTTGGATCTGATCGCGGCGAC---GGGTGACAACCTGATC 18221 || || ||| ||||||||| || | |||| |||| || ||||| | ||| Sbjct 242355 GGGACAGCGGCCGACGGCGCTCTGAACGCCATCGGCGCGATCCTGGATGACACC---ATC 242299 Query 18222 ACTGAGACGCTGTTCCCGATCGACCGGGACGGCGACGGTGAGACGGATCCGTTCATCCGC 18281 || ||| | || || | ||| |||||||||||| || ||||||||| |||| Sbjct 242298 ACCGAGGTCATCTTGCCCTTGGACGAGGACGGCGACGGCCTCACCGATCCGTTCTTCCGT 242239 Query 18282 CGGATTCTGGGTGTTGCGCCG 18302 ||| | || || || || ||| Sbjct 242238 CGGCTGCTCGGGGTGGCCCCG 242218 >SEQ97744 Length=86731 Score = 176 bits (194), Expect = 2e-39 Identities = 409/611 (67%), Gaps = 13/611 (2%) Strand=Plus/Minus Query 1115 GCGCGCCACGTCATTAAGCCTGAAGGCATCGTGTCGACGTCATGGCCGTC--TGTGCGGC 1172 ||||| ||||| | ||||| ||||| |||||||| ||||||||| | |||| | Sbjct 8607 GCGCGGTACGTCGTAGCCCCTGACGGCATTGTGTCGACCGAATGGCCGTCCATCTGCGCC 8548 Query 1173 ATGAGTGCAACGTCAACATGGGCCTGTTTTTCGATCAGTGGCAGGACGACCTTGGGAAGC 1232 | ||||| | | |||||| | |||||| | ||||| |||| ||| || | Sbjct 8547 ACA--TGCAAAG---AGATGGGCATCGAGTTCGATGACTGGCAAGACGGCCTGGGTCGCC 8493 Query 1233 TGGTTTGCGCCAAACGATCCGATGGTCTGTTCGCCGCCGACATGTTCGCGATGTCGGTGC 1292 || | | ||||| || |||| || |||| |||| | |||| | ||||| || | | Sbjct 8492 TGATCTTGGCCAAGCGCGCCGACGGCCTGTACGCCTCGGACACGACGGCGATCTCAATCC 8433 Query 1293 CACGCCAGACGGGTAAAACGTACTTCCTCGGCGCGCTGGTGTTCGCGCTGTGCAAGATGA 1352 | || ||| | || || || | | || ||||||| | |||||||||||||||| | | Sbjct 8432 CCCGGCAGTCCGGGAAGACTTTCCTCATCGGCGCCATCGTGTTCGCGCTGTGCATCAAGT 8373 Query 1353 ATCCCGGCACGACCGTGATTTGGACGGCGCACCGCACCCGCACCGCGGCGGAAACGTTCA 1412 |||| ||| | || || ||||| ||||||| | || ||| ||||| ||| Sbjct 8372 ATCCGGGCCTGCGGGTCATCTGGACCGCGCACCTGTTCAAAACGGCGCGTGAAACTTTCG 8313 Query 1413 AGAGCATGCAGGCGC--TCGC-GCTGCGTGAAGAGATCGCGCCGCACGTGCAGCAAGTCC 1469 || ||||||||| ||| ||||| | | || |||| || | | |||| Sbjct 8312 AGTCGATGCAGGCGACATCGAAGCTGCCCGGCG---TCAAGCCGTACATCGATTTCGTCC 8256 Query 1470 TCACCGGCAACGGTAAAGAGGCTGTGCTGTTCACGAACGGCTCACGGATTCTGTTCGGCG 1529 | ||| || | ||| | ||| | ||||| || ||| ||||||| | Sbjct 8255 ACCGTGGCGCAGGCGATGAGAAGATCGGTTTCGCCAACGGTTCGGTGATCATGTTCGGTG 8196 Query 1530 CCCGCGAAAAAGGCTTCGGTCGTGGTTTCGCGAAGGTCGACGTGCTGATCTTCGACGAGG 1589 | || || || ||||||||||| ||| | || ||| ||| ||||| ||||| |||| Sbjct 8195 CTCGTGAGCGTGGATTCGGTCGTGGCTTCCCCAACATCGGCGTCCTGATTTTCGATGAGG 8136 Query 1590 CGCAGATTCTCACCGAAAACGCAATGGACGACATGGTGCCGGCGACGAACGCGTCGCCGA 1649 | ||||| ||||| ||| || | ||||||||||| || |||| |||| || || Sbjct 8135 CCCAGATCCTCACGTCAAAAGCGCTAGACGACATGGTCCCATCGACCAACGTCGCGGTGA 8076 Query 1650 ACGCGCTGATCCTGCTGGCCGGCACACCGCCGAAGCCAACGGACCCGGGTGAGGTGTTCA 1709 || |||| || || | |||||||||||||||||| |||||| ||||| | |||| Sbjct 8075 ACCCGCTTGTCTTGACGATGGGCACACCGCCGAAGCCAGAAGACCCGAGTGAGTTTTTCA 8016 Query 1710 CCAATCTGCGG 1720 || || |||| Sbjct 8015 CCGGTCAGCGG 8005 >SEQ31283 Length=1512 Score = 136 bits (150), Expect = 2e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 30769 GTTCACCAGCCGCGTTGGCGCCATTCGTCGAGGCTCGGACGCTCGGCACCCAGAGTGGTG 30828 ||||||||||||||| |||||| || |||| || |||||||| || || |||||| Sbjct 863 GTTCACCAGCCGCGTGCGCGCCACTCCGCGAGATGGGGGCGCTCGGCGCCGAGCGTGGTG 804 Query 30829 TCGTCGCCGTGCCCGGGATAGACGACCGTGCGGTCGTCGAAGCGATCAAACACCTTCGCT 30888 ||||||||||||||||| |||||||| ||| |||| || || | || ||||| | Sbjct 803 TCGTCGCCGTGCCCGGGGTAGACGACGGTGTCGTCGCCGTAGACGCCGAAGACCTTGGTC 744 Query 30889 TCAAGGTCGTTCATCAGCGAGTTGAACTGATCAGGGTGTGTTGTCCGGCCAGGACCGCCC 30948 || ||||||||||||||||| ||| | || || || || ||| || |||||||| Sbjct 743 TCCAGGTCGTTCATCAGCGACGCGAAGTCCTCGGGCTGCGTCGTCTTTCCGGGACCGCCG 684 Query 30949 GGGAA 30953 ||||| Sbjct 683 GGGAA 679 >seq353213 Length=1209 Score = 89.7 bits (98), Expect = 2e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 593 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 649 |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 446 TAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGATTCCTG 390 >SEQ87579 Length=2886 Score = 89.7 bits (98), Expect = 2e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 593 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 649 ||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1477 TAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGCAGGTTCGAGTCCTG 1421 >seq299611 Length=127492 Score = 86.0 bits (94), Expect = 3e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 593 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 649 |||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 57905 TAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 57961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199763626640032