Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028960.1 Length=50999 Score E Sequences producing significant alignments: (Bits) Value seq276562 159 1e-34 seq311842 118 3e-22 >seq276562 Length=247471 Score = 159 bits (176), Expect = 1e-34 Identities = 305/437 (70%), Gaps = 33/437 (8%) Strand=Plus/Minus Query 4357 ACTCAAAACGAAAGGCAGAC-ATGAGTTTTCGTACTGCTTATGGCAATGCGTACTCCGAG 4415 || ||||| |||||||| || ||||||||||| || || || ||||| | || ||||| Sbjct 237586 ACCCAAAA-GAAAGGCACACCATGAGTTTTCGCACCGCCTACGGCAACACCTATTCCGAA 237528 Query 4416 AACGGTTGGCGTATGTGCAACCGCGACGAGTGCG---TGACGG---TCTCCGGACCGTAC 4469 ||| ||||||| ||||||||||||||||| |||| | ||| || |||| | |||| Sbjct 237527 AACAGTTGGCGCATGTGCAACCGCGACGAATGCGACATCACGCGCATCCCCGGTCTGTAC 237468 Query 4470 ATGA---ACACCGCACCGCTCCG--ACGTGGTCCTGCCGAGAAGCTCCTCGGAGAGT--T 4522 || | ||||||||||| || | | || | || || | | ||||| | | | Sbjct 237467 CTGGTTGATACCGCACCGCTGCGCAAGGGGGCACCGCTGACCA--TTCTCGGGGCATGGT 237410 Query 4523 CGT-CAGGCGCTACCACCAGGTATGTGCCCCGGTCGTGTCCCCGGTGTGGGGATGGTCGG 4581 || | || ||| | | || | | || | |||||||||||||| ||||||| Sbjct 237409 TGTACTGGTATGACCGCAACGTCGAAGA---GATCATCTCCCCGGTGTGGGGCTGGTCGG 237353 Query 4582 AGACGAACGACGTAGGCAACTCGAATCACCTGTCGGGCACCGCAGTTGACGTCAACGCTC 4641 | || |||||||| | |||||||||||||||| |||||||||| || ||| ||||||| | Sbjct 237352 ACACCAACGACGTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTGGACATCAACGCAC 237293 Query 4642 CGCAGTGGCCTTGGGGCCTTCGCAAGATGCCCGCTGATCTGGTTGCGCGGATCAACGTGC 4701 | |||| || ||||| || | ||||| | | || | ||| ||| || | Sbjct 237292 CCCAGTACCCGTGGGGTGCACGAACCATGCC--CAGCACTCGCATCGC----CAAAGTCC 237239 Query 4702 -TGTTGGAC-----CAGTTCGAGGGTGCGATCTACTGGGGTCGCAACTGGAACCGTCCGG 4755 | |||| | || ||||| ||| ||||||||||| |||||||||| | | Sbjct 237238 GCGAAGGACTTAAGCTCTTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAACCGCGCCG 237179 Query 4756 ACGAGATGCACTTCCAG 4772 |||| ||||||| |||| Sbjct 237178 ACGAAATGCACTACCAG 237162 >seq311842 Length=41669 Score = 118 bits (130), Expect = 3e-22 Identities = 106/129 (82%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 5160 GGCCCTGCCGACGACCAGCTCAACATGCGGTTCAACTGCCTCGGTGGCAAGACGCTTGTC 5219 ||||| || ||||||||||||||||||| ||||||||||||||| ||| |||| || ||| Sbjct 34836 GGCCC-GCTGACGACCAGCTCAACATGCAGTTCAACTGCCTCGGCGGCCAGACCCTCGTC 34894 Query 5220 GAAGCCGTCGCCGAGATCCGAGATGCAGTGTGCGGCA-CGAACGACAAGGACAAGACAGG 5278 || |||||||||||||||||||| |||||||||| || | || |||||| || Sbjct 34895 GAGGCCGTCGCCGAGATCCGAGACAAGGTGTGCGGCAGCGCA-GATCGCAGCAAGACCGG 34953 Query 5279 CGTGGTGCT 5287 |||||||| Sbjct 34954 GGTGGTGCT 34962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162383692660416