Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq276562 208 3e-49 SEQ97744 158 5e-34 SEQ87579 86.0 2e-12 >seq276562 Length=247471 Score = 208 bits (230), Expect = 3e-49 Identities = 316/446 (71%), Gaps = 8/446 (2%) Strand=Plus/Minus Query 12516 TTCAAGCTGCAGGGCCTCGGCAA---CAGCACCGAAAAAGTGCAGTCGATCATGGACAAC 12572 |||||| |||||| ||||||||| | ||||| | |||| ||||||| | | Sbjct 246967 TTCAAGTTGCAGGCCCTCGGCAATGACGCCACCGCGGTCGCGCAG---ATCATGGCCGCC 246911 Query 12573 GCCCTGGCGGCCGTCGACAAGACGGCGTTCGGGCTCGACGAGGCTGCCACCACAGCAGCG 12632 || | || | || | || || ||| | | ||||| || ||||||||||| || Sbjct 246910 GCGCAGGGCTCGGTGAAGGGCACCGCCTTCTCGATGGACGAAGCGGCCACCACAGCGGCC 246851 Query 12633 TCCGCGGTGGCCGCCGGGCTTGAGCCGGGCGAGCAGCTCACCGGCTACTTGAAAACTGTC 12692 | ||||| ||||||||| | |||| || ||| | | || ||| ||| || ||| Sbjct 246850 ACGGCGGTCGCCGCCGGGGTCAAGCCCGGTGAGGACTTGTCCAAGTACCTGACCACCGTC 246791 Query 12693 GCAGACACGGCCGCTATCGCCGGTACCTCAATGGCCGACATGGGCGCA-ATCTTCAACAA 12751 || || | ||||| ||||| || || |||| ||| ||||| ||| ||||||||||| Sbjct 246790 GCTGATGCCGCCGCGATCGCGGGCGCCGACATGGGCGATATGGG-GCACATCTTCAACAA 246732 Query 12752 GGTGCAGACGTCGGGCAAGGCGTTCACGGGCGACCTCAACATGCTGTCGGATCGCGGCCT 12811 ||||||||| |||||||||||| | || | ||||| ||||||||| ||||| || | Sbjct 246731 GGTGCAGACCTCGGGCAAGGCGATGACCGATGACCTGAACATGCTGGGCGATCGGGGATT 246672 Query 12812 GCCGATATTCCAATGGCTACAAGAGGAATACGGCGTAACCGGCGAGGCGCTCTCAAAGAT 12871 |||||| ||| ||||| ||| |||||||| || ||||||| | ||| || ||||| Sbjct 246671 GCCGATCTTCGCCTGGCTGCAAAAGGAATACAAGGTCACCGGCGCCGAGCTGTCCAAGAT 246612 Query 12872 GGTCAGCGAGGGCAAGGTCGACGCTGCGACATTCCAGAAGGTTGTTGCCGAGCGCATCGG 12931 |||| ||||| |||| ||| | || ||||||||| || | ||| || | | || Sbjct 246611 GGTCGAAAAGGGCCAGGTTGACTCAGCCACATTCCAGCGCGTCATCGCCCAGAACGTGGG 246552 Query 12932 CGGCGCCGCTCAGGAAATGGGCGGCA 12957 ||| |||| || | |||||||||| Sbjct 246551 CGGTACCGCCAAGAAGATGGGCGGCA 246526 Score = 125 bits (138), Expect = 3e-24 Identities = 360/538 (67%), Gaps = 33/538 (6%) Strand=Plus/Minus Query 17667 GGTTTCATCAACCTGGCGCGCAACTACTGGCCCTTGCTGGCACTGCCTACG-CAGGTGAT 17725 || ||| | |||||| ||||| | |||||| || ||||| ||||| || || | | Sbjct 242733 GGGTTCCTGAACCTGCTGCGCACGTTCTGGCCGTTCCTGGCGCTGCCCACCTCATGGGCA 242674 Query 17726 GAATCCCGGCGCGTGGATCGGGCAGGCGTCCAACCTCGCC---AACCTCAACCCGCTGAA 17782 || ||||| || | ||| | | || || |||| |||||| ||||||| | Sbjct 242673 GA--CCCGGTGCA-----CTGGCTGAC---CACCCGCGCCGGGAACCTCTCCCCGCTGCA 242624 Query 17783 CTGGCCGGTTCAAATGCAGTTCGTCAATCCGATATTCGATCGGTCGCGGCTGAGCGTGCT 17842 |||||| | || || ||||||||||| || | || |||| |||||| | ||||| Sbjct 242623 CTGGCCAATACAGATACAGTTCGTCAACCCCGTCTTGGATCAGTCGCGTAT---CGTGCC 242567 Query 17843 CATGTCC-CGGTGGAACAAC-GC-GCACGACGTGTGCGACGCACTGCT---CAAGTACGC 17896 || || || | ||| || ||||||| | |||||| ||| | || || | Sbjct 242566 GATCGCCGCGAAAGCGCAAATGCTGCACGACATTC---ACGCACCGCTGGGCGAGGACAC 242510 Query 17897 CGG-GTGTCACGTGCGTGCGTACTGCTGGCTGGAAGAGGACGAGGACAGCCCGCACCCCG 17955 || || || || | ||| ||| ||||||||||||| |||||||||||||| Sbjct 242509 TGGCGTCGGAC-TGATCGACTACCTGTGGTTGGAAGAGGACGAAACCAGCCCGCACCCCG 242451 Query 17956 AGCTGGCGGCGATCGTCGGCGAGAAGCTCGCCAGGCCGACGCGCAACTGCATCGTGCTGG 18015 | ||||| || |||||||||||||| ||| | || || ||||||||||||||||| | Sbjct 242450 AACTGGCCGCACTCGTCGGCGAGAAGGCCGCTCGCCCCACACGCAACTGCATCGTGCTCG 242391 Query 18016 CGGTCGAGGACATGAGCGGCACGACCGGAGTCACGGGCACGGCGCTTGACGGCGCGCT-- 18073 | |||| |||| | || | ||||| || || || ||| |||||||| || Sbjct 242390 CCTTCGAAGACAAGTCAGGAATCACCGGCCCTACCGGGACAGCGGCCGACGGCGCTCTGA 242331 Query 18074 -CGACCTCATCGCGGTGTCGGCCGACAACAT-TCTCAGCACGCTGGTGCATATCGACCGT 18131 || | || |||| | || |||| ||| | || | | ||| | ||| Sbjct 242330 ACGCCATCGGCGCGATCCTGGATGACACCATCACCGAGGTC-ATCTTGCCCTTGGACGAG 242272 Query 18132 GACGGCGACGGCGTGGACGATCCGTTTATCCGCAAGCTGCTGGGCGTCGCCCCGGCAA 18189 |||||||||||| | ||||||||| |||| |||||| || || ||||||| || Sbjct 242271 GACGGCGACGGCCTCACCGATCCGTTCTTCCGTCGGCTGCTCGGGGTGGCCCCGGAAA 242214 Score = 87.8 bits (96), Expect = 7e-13 Identities = 103/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 38364 GTGGCGGGATAAGGCCGTGTGCGCGCAGACCGACCCCGAAATCTTCTTTCCAGAGCAGGG 38423 ||||| || ||||| ||||||| |||||||| ||||| ||||| || ||| |||| Sbjct 157851 GTGGCAAGAGAAGGCGCTGTGCGCACAGACCGATCCCGAGGCGTTCTTCCCTGAGAAGGG 157792 Query 38424 CGGCAGCACCCGCGAGGCCAAGCGCATTTGCGGCGGCTGCCAGGTGTCCGACGAGTGCCT 38483 ||| || ||||||||||||||||| ||| |||||| | || ||||||||||| Sbjct 157791 CGGGTCGACTCGCGAGGCCAAGCGCATCTGCCAGGGCTGCGAAGTCAAGGACGAGTGCCT 157732 Query 38484 CGAATGGGCGCTGAGCCA 38501 || | || ||| |||| Sbjct 157731 TGAGTATGCACTG-GCCA 157715 >SEQ97744 Length=86731 Score = 158 bits (174), Expect = 5e-34 Identities = 375/559 (67%), Gaps = 11/559 (2%) Strand=Plus/Minus Query 1640 TGGCCGTCCGTT--CGCCACGAGTGCAACGTCAACATGGGGTTGTATTTCGACCAATGGC 1697 ||||||||| | |||||| ||||| | | ||||| | | ||||| | |||| Sbjct 8565 TGGCCGTCCATCTGCGCCACA--TGCAAAG---AGATGGGCATCGAGTTCGATGACTGGC 8511 Query 1698 AGGACGACCTCGGAAAGCTGGTATGCGCCAAGCGATCCGACGGCCTGTATGCGGCCGACA 1757 | |||| ||| || ||| | | |||||||| ||||||||||||| || | |||| Sbjct 8510 AAGACGGCCTGGGTCGCCTGATCTTGGCCAAGCGCGCCGACGGCCTGTACGCCTCGGACA 8451 Query 1758 TGTTCGCAATGTCGATCCCGAGGCAGACAGGCAAGACCTATTTTCTCGGCGCGATCGTGT 1817 | || || || ||||| ||||| | || ||||| | | ||||||| ||||||| Sbjct 8450 CGACGGCGATCTCAATCCCCCGGCAGTCCGGGAAGACTTTCCTCATCGGCGCCATCGTGT 8391 Query 1818 TCGCGCTCTGCAAGATGACGCCCGGCACAACGGTGATCTGGACGGCGCACCGGACACGTA 1877 ||||||| |||| | | || ||| ||| |||||||| ||||||| | | Sbjct 8390 TCGCGCTGTGCATCAAGTATCCGGGCCTGCGGGTCATCTGGACCGCGCACCTGTTCAAAA 8331 Query 1878 CGGCCGCTGAGACGTTCAAGAGTATGCAGGCGCTCGCCAAGC-GCGAGCAGATCGCCCCG 1936 |||| ||| || ||| || ||||||||| | |||| || | | || ||| Sbjct 8330 CGGCGCGTGAAACTTTCGAGTCGATGCAGGCGACATCGAAGCTGCCCGGCG-TCAAGCCG 8272 Query 1937 CACATCCTGAACGTGCACACCGGCAACGGCAAAGAGGCCGTGTTGTTCACCAACGGCAGC 1996 ||||| ||| ||| ||| ||| | ||| | ||| ||||||| Sbjct 8271 TACATCGATTTCGTCCACCGTGGCGCAGGCGATGAGAAGATCGGTTTCGCCAACGGTTCG 8212 Query 1997 CGAATCCTGTTCGGCGCCCGTGAAAAGGGTTTCGGCCGCGGTTTCGCCAAGGTCGACGTG 2056 ||| ||||||| || ||||| || ||||| || || ||| |||| ||| ||| Sbjct 8211 GTGATCATGTTCGGTGCTCGTGAGCGTGGATTCGGTCGTGGCTTCCCCAACATCGGCGTC 8152 Query 2057 CTGATTTTCGACGAGGCTCAGATCCTCA-GTGAAAACGCAATGGACGACATGGTTCCGGC 2115 ||||||||||| ||||| |||||||||| || |||| || | ||||||||||| || | Sbjct 8151 CTGATTTTCGATGAGGCCCAGATCCTCACGTCAAAA-GCGCTAGACGACATGGTCCCATC 8093 Query 2116 GACCAACGCCTCGCCTAACGGCCTGATCCTGTTCGCGGGCACCCCGCCGAAGCCGACAGA 2175 |||||||| | || ||| || || || |||||| ||||||||||| ||| Sbjct 8092 GACCAACGTCGCGGTGAACCCGCTTGTCTTGACGATGGGCACACCGCCGAAGCCAGAAGA 8033 Query 2176 CCCCGGCGAGGTGTTCACC 2194 ||| | ||| | |||||| Sbjct 8032 CCCGAGTGAGTTTTTCACC 8014 Score = 104 bits (114), Expect = 9e-18 Identities = 122/161 (76%), Gaps = 8/161 (5%) Strand=Plus/Minus Query 60327 TGCGGCGAGCCGATCAACTACGAGGCGCATCACCTGCACCC--TGACTCGTTTCAGGTCG 60384 |||||||| || ||| ||||||| | ||||||| ||||| ||| | | || || | Sbjct 9579 TGCGGCGAACCCATCGACTACGACGTCGATCACCTACACCCCCTGAGT--TACCAAGTGG 9522 Query 60385 ACCACATCACGCCACTGGATGCA--GGCGGATCGGACACGCTCGACAACACGCAGCCGAC 60442 ||||| ||| |||||| | || || || |||||||||||| ||| | | ||| | Sbjct 9521 ACCACGTCATTCCACTG--TCCAAGGGTGGCGCGGACACGCTCGCCAATAAGGTGCCATC 9464 Query 60443 GCACCGCAAGTGCAACCGCGACAAGAGCAACAAGCTGCCCG 60483 ||| || ||||||||||| ||||||||| |||||||||||| Sbjct 9463 GCATCGAAAGTGCAACCGGGACAAGAGCGACAAGCTGCCCG 9423 >SEQ87579 Length=2886 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 969 GGCGCGCCTG-GGTGTGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGC 1027 |||||||| || |||||||||| | ||||||||||||||||||||| |||| ||| || Sbjct 1494 GGCGCGCCGAAGGGGTGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTCGC 1435 Query 1028 ACGTTCGAGTCGTGCCGCGCCCGC 1051 | ||||||||| || ||| || || Sbjct 1434 AGGTTCGAGTCCTGTCGCCCCTGC 1411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193005291264576