Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq293992 212 5e-50 seq301306 95.1 1e-14 >seq293992 Length=6064 Score = 212 bits (234), Expect = 5e-50 Identities = 340/481 (71%), Gaps = 17/481 (4%) Strand=Plus/Plus Query 71279 ATAAAAACACTATGTTCTAGGCTGCTAATTCTCTGTATTTTACAGGAGATAAGTAGCCTA 71338 ||||||| | | | |||| ||||| ||| | || | || || ||| |||| ||| Sbjct 2923 ATAAAAAAGCATTTTCCTAGACTGCTGATTTCCGATAATCTATCGGCGATTGGTAGTCTA 2982 Query 71339 GTTTTTGTTGAATTCGATTATTATTATAGTTTTTAATGTATTTTTCGACAATATCTATTA 71398 ||||||||||||||||| | | |||||| | |||||||||||| ||||| ||||||| Sbjct 2983 GTTTTTGTTGAATTCGACTTTCATTATAATAAGTAATGTATTTTTTTACAATTTCTATTA 3042 Query 71399 CAATATGAT-TAGAGCTATTAAGCTGATTATTGATGTAAAAAGTTTCAGACTTTAGCGAG 71457 ||||| ||| ||| ||| | || | ||| || |||||||||||||| ||| Sbjct 3043 CAATA-GATGTAGGTTCATTTGTGAGCCCATCTAAGTAGAACGTTTCAGACTTTAGTGAG 3101 Query 71458 GAATGAAAACTTTCTATCGGGGCGTTATCAGCAGGTGTTCCCTTTCGGGACATACTTCTG 71517 | |||||| ||| || ||| ||||| | |||||| || || ||||||||||| || Sbjct 3102 GCATGAAACGATTCGATGAAGGCATTATCTGAAGGTGTCCCTTTGCGGGACATACTCATG 3161 Query 71518 ATAATGCCTTTTTCTTCGCATAATTG---ATAATAAGCATAAGATGTATAAACGCTGCCT 71574 ||||||||||| || || ||| | || || |||| |||||||| |||| Sbjct 3162 GTAATGCCTTTTGTTT---TTATTTGGTTCTGGTAGTCAAAAGAAGTATAAACAGAGCCT 3218 Query 71575 TGATCACTATGTAATATACACCCCTCGGGTATATCG---ATTTGATTTAATGTATCATTA 71631 ||||||||||| |||| ||| || | | | | | | ||||| | |||||| | Sbjct 3219 TGATCACTATGCAATAGACA---ATCCGTTGTTTGGGGTAATTGATCAAGTGTATCCAGA 3275 Query 71632 ACTAAACTTTGGTCTTGTTTATCATCTATTTTATACGCCACAATTTCTCCGTTATAAATA 71691 || ||| ||||| |||||| | || |||| || | |||||| | || || | | Sbjct 3276 ACAAAAGCCGTATCTTGCTTATCACCGATGGTATAGGCGATAATTTCACTATTGTATAAA 3335 Query 71692 TCCATTATCGAAGATAAATACACATAG--AATGACCAAATGGTAAATAAGTAATATCGGT 71749 ||||| || ||||||||||||| || | |||||||| || | |||||||||||| || Sbjct 3336 TCCATAATTGAAGATAAATACA-ATTGCTTTTGACCAAAAGGCAGATAAGTAATATCTGT 3394 Query 71750 T 71750 | Sbjct 3395 T 3395 >seq301306 Length=1856 Score = 95.1 bits (104), Expect = 1e-14 Identities = 172/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 126096 TGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACA 126155 || ||||| || | ||||| | || ||||| | ||| ||||| | | ||||| Sbjct 1209 TGAGCATCACCCAGAGTATGTACAAAATCACCGGGTTGAAGATCACATACCTGTGCAATC 1150 Query 126156 AGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCA 126215 | || || || || |||||||| ||||| ||||| || || |||||||||||||| ||| Sbjct 1149 ATGTGAGTTAGCAAGGCATAACTGGCAATGTTGAACGGCACTCCTAAAAATATATCGGCA 1090 Query 126216 CTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTG 126275 |||| ||||| || ||||| | || ||| ||||| || || |||| | Sbjct 1089 CTTCGCTGATACAACTGACAGGAAAGACGTCCATCTGCAACGTAGAACTGGAACAGGGCA 1030 Query 126276 TGGCAAGGTGGTAATGCCATTGAATCGATTTCAGT--AGGATTCCATGCTGAAACAATGT 126333 ||||| || || || |||||| ||| | |||| || ||||| || || ||||| Sbjct 1029 TGGCATGGCGGCAACGCCATTTCATCAA--CCAGTGCGGGGTTCCAGGCCGAGACAATCA 972 Query 126334 GACGTCGAGA 126343 | ||||| || Sbjct 971 GCCGTCGGGA 962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406820175677216